RNA–Protein interactions for RNA: ENST00000636367.1

SMARCA2-250, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 1,889 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-250ENST00000636367 UQCRQO14949 82 aa4.05□□□□□ -1.76
SMARCA2-250ENST00000636367 PMCHL1Q16048 86 aa4.05□□□□□ -1.76
SMARCA2-250ENST00000636367 ROMO1P60602 79 aa4.05□□□□□ -1.76
SMARCA2-250ENST00000636367 LINC00959A0A1B0GUT2 108 aa4.04□□□□□ -1.76
SMARCA2-250ENST00000636367 CCL25O15444 150 aa4.04□□□□□ -1.76
SMARCA2-250ENST00000636367 FABP4P15090 132 aa4.04□□□□□ -1.76
SMARCA2-250ENST00000636367 KRTAP26-1Q6PEX3 210 aa4.04□□□□□ -1.76
SMARCA2-250ENST00000636367 Q8N814 137 aa4.04□□□□□ -1.76
SMARCA2-250ENST00000636367 C9orf163Q8N9P6 203 aa4.04□□□□□ -1.76
SMARCA2-250ENST00000636367 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.03□□□□□ -1.76
SMARCA2-250ENST00000636367 SS18Q15532 418 aa4.03□□□□□ -1.76
SMARCA2-250ENST00000636367 Q9BRP9 147 aa4.03□□□□□ -1.76
SMARCA2-250ENST00000636367 PSORS1C2Q9UIG4 136 aa4.03□□□□□ -1.76
SMARCA2-250ENST00000636367 K7EMI3 77 aa4.03□□□□□ -1.77
SMARCA2-250ENST00000636367 BAGE3Q86Y29 109 aa4.03□□□□□ -1.77
SMARCA2-250ENST00000636367 CLEC2BQ92478 149 aa4.03□□□□□ -1.77
SMARCA2-250ENST00000636367 TMEM141Q96I45 108 aa4.03□□□□□ -1.77
SMARCA2-250ENST00000636367 TIMM21Q9BVV7 248 aa4.03□□□□□ -1.77
SMARCA2-250ENST00000636367 PCLOQ9Y6V0 5065 aa4.02□□□□□ -1.77
SMARCA2-250ENST00000636367 LINC01546A6NGU7 62 aa4.02□□□□□ -1.77
SMARCA2-250ENST00000636367 IGIPA6NJ69 53 aa4.02□□□□□ -1.77
SMARCA2-250ENST00000636367 MRPS36P82909 103 aaKnown RBP4.02□□□□□ -1.77
SMARCA2-250ENST00000636367 FAM19A2Q8N3H0 131 aa4.02□□□□□ -1.77
SMARCA2-250ENST00000636367 C5orf38Q86SI9 138 aa4.01□□□□□ -1.77
SMARCA2-250ENST00000636367 LINC00526Q96FQ7 95 aa4.01□□□□□ -1.77
SMARCA2-250ENST00000636367 LRP1BQ9NZR2 4599 aa4.01□□□□□ -1.77
SMARCA2-250ENST00000636367 DNAH5Q8TE73 4624 aa4.01□□□□□ -1.77
SMARCA2-250ENST00000636367 NUPR1O60356 82 aa4.01□□□□□ -1.77
SMARCA2-250ENST00000636367 COX6A2Q02221 97 aa4.01□□□□□ -1.77
SMARCA2-250ENST00000636367 OCIAD2Q56VL3 154 aa4.01□□□□□ -1.77
SMARCA2-250ENST00000636367 TEN1Q86WV5 123 aa4.01□□□□□ -1.77
SMARCA2-250ENST00000636367 PRO2289Q9P1D8 64 aa4.01□□□□□ -1.77
SMARCA2-250ENST00000636367 HAMPP81172 84 aa4□□□□□ -1.77
SMARCA2-250ENST00000636367 HSPG2P98160 4391 aa4□□□□□ -1.77
SMARCA2-250ENST00000636367 ABCA13Q86UQ4 5058 aa4□□□□□ -1.77
SMARCA2-250ENST00000636367 UBE2D1P51668 147 aa3.99□□□□□ -1.77
SMARCA2-250ENST00000636367 AMELXQ99217 191 aa3.99□□□□□ -1.77
SMARCA2-250ENST00000636367 A0A0G2JQZ4 141 aa3.98□□□□□ -1.77
SMARCA2-250ENST00000636367 IGLV6-57P01721 117 aa3.98□□□□□ -1.77
SMARCA2-250ENST00000636367 KRTAP10-1P60331 282 aa3.98□□□□□ -1.77
SMARCA2-250ENST00000636367 CST9LQ9H4G1 147 aa3.98□□□□□ -1.77
SMARCA2-250ENST00000636367 APOBP04114 4563 aaKnown RBP3.97□□□□□ -1.77
SMARCA2-250ENST00000636367 RAB37Q96AX2 223 aa3.97□□□□□ -1.77
SMARCA2-250ENST00000636367 C14orf144Q96I85 54 aa3.97□□□□□ -1.77
SMARCA2-250ENST00000636367 CDKN2A-AS1Q9UH64 79 aa3.97□□□□□ -1.77
SMARCA2-250ENST00000636367 GVQW2A0A096LPI5 108 aaPredicted RBP3.96□□□□□ -1.77
SMARCA2-250ENST00000636367 hDV103S1A0JD37 113 aa3.96□□□□□ -1.77
SMARCA2-250ENST00000636367 LINC01549A6NIU2 74 aa3.96□□□□□ -1.77
SMARCA2-250ENST00000636367 LEPROTL1O95214 131 aa3.96□□□□□ -1.77
SMARCA2-250ENST00000636367 SPAG11BQ08648 103 aa3.96□□□□□ -1.77
SMARCA2-250ENST00000636367 IFI27L1Q96BM0 104 aa3.96□□□□□ -1.77
SMARCA2-250ENST00000636367 TOMM7Q9P0U1 55 aa3.96□□□□□ -1.77
SMARCA2-250ENST00000636367 SPINK8P0C7L1 97 aa3.95□□□□□ -1.78
SMARCA2-250ENST00000636367 PMCHL2Q9BQD1 86 aa3.95□□□□□ -1.78
SMARCA2-250ENST00000636367 C14orf132Q9NPU4 83 aa3.95□□□□□ -1.78
SMARCA2-250ENST00000636367 LOC107984156A0A0G2JMH3 177 aa3.94□□□□□ -1.78
SMARCA2-250ENST00000636367 CNBPP62633 177 aaKnown RBP3.94□□□□□ -1.78
SMARCA2-250ENST00000636367 SEC11AP67812 179 aa3.94□□□□□ -1.78
SMARCA2-250ENST00000636367 CIRBPQ14011 172 aaKnown RBP3.94□□□□□ -1.78
SMARCA2-250ENST00000636367 MEIG1Q5JSS6 88 aa3.94□□□□□ -1.78
SMARCA2-250ENST00000636367 C2orf82Q6UX34 121 aa3.94□□□□□ -1.78
SMARCA2-250ENST00000636367 ARL17AQ8IVW1 177 aa3.94□□□□□ -1.78
SMARCA2-250ENST00000636367 MRPL35Q9NZE8 188 aaKnown RBP3.94□□□□□ -1.78
SMARCA2-250ENST00000636367 IGKV2-24A0A0C4DH68 120 aa3.94□□□□□ -1.78
SMARCA2-250ENST00000636367 BAALC-AS2P0C853 105 aa3.94□□□□□ -1.78
SMARCA2-250ENST00000636367 TPRXLQ17RH7 258 aa3.94□□□□□ -1.78
SMARCA2-250ENST00000636367 TMEM170BQ5T4T1 132 aa3.94□□□□□ -1.78
SMARCA2-250ENST00000636367 IGFL1Q6UW32 110 aa3.94□□□□□ -1.78
SMARCA2-250ENST00000636367 UNQ6190/PRO20217Q6UXQ8 127 aa3.94□□□□□ -1.78
SMARCA2-250ENST00000636367 IGLC3P0DOY3 106 aa3.93□□□□□ -1.78
SMARCA2-250ENST00000636367 F8VRH5 84 aa3.92□□□□□ -1.78
SMARCA2-250ENST00000636367 SMR3BP02814 79 aaPredicted RBP3.92□□□□□ -1.78
SMARCA2-250ENST00000636367 C9orf116Q5BN46 136 aaPredicted RBP3.92□□□□□ -1.78
SMARCA2-250ENST00000636367 DPH3Q96FX2 82 aa3.92□□□□□ -1.78
SMARCA2-250ENST00000636367 A0A096LNI7 61 aa3.92□□□□□ -1.78
SMARCA2-250ENST00000636367 TRAV12-1A0A0B4J245 112 aa3.92□□□□□ -1.78
SMARCA2-250ENST00000636367 H3BRM9 83 aa3.92□□□□□ -1.78
SMARCA2-250ENST00000636367 NDUFA1O15239 70 aa3.92□□□□□ -1.78
SMARCA2-250ENST00000636367 C6orf48Q9UBA6 75 aa3.92□□□□□ -1.78
SMARCA2-250ENST00000636367 FAT1Q14517 4588 aa3.91□□□□□ -1.78
SMARCA2-250ENST00000636367 CCDC179H3BU77 68 aa3.91□□□□□ -1.78
SMARCA2-250ENST00000636367 TRACP01848 142 aa3.91□□□□□ -1.78
SMARCA2-250ENST00000636367 P0C880 135 aa3.91□□□□□ -1.78
SMARCA2-250ENST00000636367 KRTDAPP60985 99 aa3.91□□□□□ -1.78
SMARCA2-250ENST00000636367 Q6ZSA8 131 aa3.91□□□□□ -1.78
SMARCA2-250ENST00000636367 Q8IZM0 81 aa3.91□□□□□ -1.78
SMARCA2-250ENST00000636367 COX7B2Q8TF08 81 aa3.91□□□□□ -1.78
SMARCA2-250ENST00000636367 SYS1-DBNDD2H3BUS1 97 aa3.9□□□□□ -1.78
SMARCA2-250ENST00000636367 C3orf79P0CE67 100 aa3.9□□□□□ -1.78
SMARCA2-250ENST00000636367 ZNF625Q96I27 306 aaPredicted RBP3.9□□□□□ -1.78
SMARCA2-250ENST00000636367 IGKCP01834 107 aa3.89□□□□□ -1.79
SMARCA2-250ENST00000636367 PLNP26678 52 aa3.89□□□□□ -1.79
SMARCA2-250ENST00000636367 SPACA4Q8TDM5 124 aa3.89□□□□□ -1.79
SMARCA2-250ENST00000636367 ATOH7Q8N100 152 aa3.88□□□□□ -1.79
SMARCA2-250ENST00000636367 DNAH8Q96JB1 4490 aa3.88□□□□□ -1.79
SMARCA2-250ENST00000636367 TRBV30A0A0K0K1B3 111 aa3.88□□□□□ -1.79
SMARCA2-250ENST00000636367 C20orf202A1L168 122 aa3.88□□□□□ -1.79
SMARCA2-250ENST00000636367 A6NN06 94 aa3.88□□□□□ -1.79
SMARCA2-250ENST00000636367 LINC00304Q8N9R0 145 aa3.88□□□□□ -1.79
SMARCA2-250ENST00000636367 TMEM254Q8TBM7 123 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms