RNA–Protein interactions for RNA: ENST00000629277.1

MECP2-218, Transcript of methyl-CpG binding protein 2, humanhuman

Gene MECP2, Length 2,558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-218ENST00000629277 PRB2P02812 416 aaPredicted RBP11.86□□□□□ -0.51
MECP2-218ENST00000629277 COL6A5A8TX70 2615 aa11.86□□□□□ -0.51
MECP2-218ENST00000629277 ZCCHC13Q8WW36 166 aaKnown RBP11.86□□□□□ -0.51
MECP2-218ENST00000629277 CD164Q04900 197 aa11.85□□□□□ -0.51
MECP2-218ENST00000629277 IGFL1Q6UW32 110 aa11.85□□□□□ -0.51
MECP2-218ENST00000629277 hDV103S1A0JD37 113 aa11.85□□□□□ -0.51
MECP2-218ENST00000629277 C1orf64Q8NEQ6 169 aa11.85□□□□□ -0.51
MECP2-218ENST00000629277 HCG22E2RYF7 251 aa11.84□□□□□ -0.51
MECP2-218ENST00000629277 WFDC13Q8IUB5 93 aa11.84□□□□□ -0.51
MECP2-218ENST00000629277 NBEAL1Q6ZS30 2694 aa11.84□□□□□ -0.51
MECP2-218ENST00000629277 IGKV2-24A0A0C4DH68 120 aa11.83□□□□□ -0.52
MECP2-218ENST00000629277 RPL37AP61513 92 aaKnown RBP11.82□□□□□ -0.52
MECP2-218ENST00000629277 DNAH3Q8TD57 4116 aa11.82□□□□□ -0.52
MECP2-218ENST00000629277 A0A087WSZ3 146 aa11.81□□□□□ -0.52
MECP2-218ENST00000629277 PRR15Q8IV56 129 aa11.8□□□□□ -0.52
MECP2-218ENST00000629277 A0A096LNI7 61 aa11.78□□□□□ -0.52
MECP2-218ENST00000629277 DNAH9Q9NYC9 4486 aa11.77□□□□□ -0.52
MECP2-218ENST00000629277 HUWE1Q7Z6Z7 4374 aaKnown RBP11.77□□□□□ -0.52
MECP2-218ENST00000629277 KRTAP24-1Q3LI83 254 aa11.74□□□□□ -0.53
MECP2-218ENST00000629277 KRTAP11-1Q8IUC1 163 aa11.74□□□□□ -0.53
MECP2-218ENST00000629277 KRTAP1-5Q9BYS1 174 aa11.73□□□□□ -0.53
MECP2-218ENST00000629277 PSPHP1O15172 72 aa11.72□□□□□ -0.53
MECP2-218ENST00000629277 COL7A1Q02388 2944 aa11.7□□□□□ -0.54
MECP2-218ENST00000629277 CHTF8P0CG12 524 aa11.7□□□□□ -0.54
MECP2-218ENST00000629277 UBE2AP49459 152 aa11.69□□□□□ -0.54
MECP2-218ENST00000629277 LINC00208Q96KT6 92 aa11.69□□□□□ -0.54
MECP2-218ENST00000629277 TENM2Q9NT68 2774 aa11.68□□□□□ -0.54
MECP2-218ENST00000629277 C16orf90A8MZG2 172 aa11.67□□□□□ -0.54
MECP2-218ENST00000629277 PHF5AQ7RTV0 110 aaKnown RBP11.67□□□□□ -0.54
MECP2-218ENST00000629277 Q1T7F1 81 aa11.67□□□□□ -0.54
MECP2-218ENST00000629277 STAB2Q8WWQ8 2551 aa11.65□□□□□ -0.54
MECP2-218ENST00000629277 IGLV8-61A0A075B6I0 122 aa11.65□□□□□ -0.54
MECP2-218ENST00000629277 TRAV22A0A0B4J277 110 aa11.65□□□□□ -0.55
MECP2-218ENST00000629277 KRTAP29-1A8MX34 341 aaPredicted RBP11.65□□□□□ -0.55
MECP2-218ENST00000629277 CYP4F30PQ9H0H9 118 aa11.65□□□□□ -0.55
MECP2-218ENST00000629277 MP68P56378 58 aa11.64□□□□□ -0.55
MECP2-218ENST00000629277 DNAH7Q8WXX0 4024 aa11.63□□□□□ -0.55
MECP2-218ENST00000629277 CNBPP62633 177 aaKnown RBP11.62□□□□□ -0.55
MECP2-218ENST00000629277 CASC2Q6XLA1 102 aa11.62□□□□□ -0.55
MECP2-218ENST00000629277 H0Y9P7 68 aa11.6□□□□□ -0.55
MECP2-218ENST00000629277 C4orf48Q5BLP8 95 aa11.6□□□□□ -0.55
MECP2-218ENST00000629277 NDUFB1O75438 58 aa11.59□□□□□ -0.55
MECP2-218ENST00000629277 B9D2Q9BPU9 175 aa11.57□□□□□ -0.56
MECP2-218ENST00000629277 A8MUN3 132 aa11.57□□□□□ -0.56
MECP2-218ENST00000629277 LINC00472Q9H8W2 130 aa11.56□□□□□ -0.56
MECP2-218ENST00000629277 MGAM2Q2M2H8 2515 aa11.56□□□□□ -0.56
MECP2-218ENST00000629277 K7EIL1 84 aa11.55□□□□□ -0.56
MECP2-218ENST00000629277 A8MU10 97 aa11.54□□□□□ -0.56
MECP2-218ENST00000629277 A8MWP4 228 aa11.54□□□□□ -0.56
MECP2-218ENST00000629277 H0Y9J4 135 aa11.53□□□□□ -0.56
MECP2-218ENST00000629277 PANO1I0J062 215 aa11.5□□□□□ -0.57
MECP2-218ENST00000629277 SPRR1BP22528 89 aa11.49□□□□□ -0.57
MECP2-218ENST00000629277 UBE2DNLQ8IWF7 75 aa11.47□□□□□ -0.57
MECP2-218ENST00000629277 MMP24-AS1A0A0U1RRL7 71 aa11.46□□□□□ -0.58
MECP2-218ENST00000629277 Q5VV11 94 aa11.46□□□□□ -0.58
MECP2-218ENST00000629277 C9orf163Q8N9P6 203 aa11.45□□□□□ -0.58
MECP2-218ENST00000629277 SPANXA2-OT1Q8N9U9 137 aa11.44□□□□□ -0.58
MECP2-218ENST00000629277 IGLV9-49A0A0B4J1Y8 123 aa11.43□□□□□ -0.58
MECP2-218ENST00000629277 PLECQ15149 4684 aaKnown RBP11.43□□□□□ -0.58
MECP2-218ENST00000629277 Q8N9P0 234 aaPredicted RBP11.43□□□□□ -0.58
MECP2-218ENST00000629277 RBM12B-AS1Q9P1G2 102 aa11.42□□□□□ -0.58
MECP2-218ENST00000629277 PCOTHQ58A44 107 aa11.41□□□□□ -0.58
MECP2-218ENST00000629277 KTN1-AS1Q86SY8 53 aa11.41□□□□□ -0.58
MECP2-218ENST00000629277 H3BPC8 53 aa11.4□□□□□ -0.58
MECP2-218ENST00000629277 FRAS1Q86XX4 4008 aa11.4□□□□□ -0.58
MECP2-218ENST00000629277 Q96NJ1 140 aa11.38□□□□□ -0.59
MECP2-218ENST00000629277 PRR15LQ9BU68 103 aa11.37□□□□□ -0.59
MECP2-218ENST00000629277 APLNQ9ULZ1 77 aa11.37□□□□□ -0.59
MECP2-218ENST00000629277 KRTAP13-1Q8IUC0 172 aa11.37□□□□□ -0.59
MECP2-218ENST00000629277 CHKB-CPT1BH3BT56 60 aa11.36□□□□□ -0.59
MECP2-218ENST00000629277 C14orf177Q52M58 125 aa11.36□□□□□ -0.59
MECP2-218ENST00000629277 COA5Q86WW8 74 aa11.35□□□□□ -0.59
MECP2-218ENST00000629277 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.33□□□□□ -0.6
MECP2-218ENST00000629277 MOBPQ13875 183 aa11.32□□□□□ -0.6
MECP2-218ENST00000629277 IGLV7-46A0A075B6I9 117 aa11.31□□□□□ -0.6
MECP2-218ENST00000629277 ANAPC11Q9NYG5 84 aa11.31□□□□□ -0.6
MECP2-218ENST00000629277 IGHV6-1A0A0B4J1U7 121 aa11.3□□□□□ -0.6
MECP2-218ENST00000629277 LIMD2Q9BT23 127 aa11.3□□□□□ -0.6
MECP2-218ENST00000629277 DYNC2H1Q8NCM8 4307 aaKnown RBP11.3□□□□□ -0.6
MECP2-218ENST00000629277 NDUFS5O43920 106 aa11.29□□□□□ -0.6
MECP2-218ENST00000629277 C8orf17Q9NRJ1 99 aa11.28□□□□□ -0.6
MECP2-218ENST00000629277 DNAH8Q96JB1 4490 aa11.27□□□□□ -0.61
MECP2-218ENST00000629277 ASB16-AS1Q495Z4 193 aa11.27□□□□□ -0.61
MECP2-218ENST00000629277 A0A087X002 238 aa11.26□□□□□ -0.61
MECP2-218ENST00000629277 NOTCH2NLQ7Z3S9 236 aa11.26□□□□□ -0.61
MECP2-218ENST00000629277 NBDYA0A0U1RRE5 68 aa11.25□□□□□ -0.61
MECP2-218ENST00000629277 Q6ZRN7 208 aaPredicted RBP11.24□□□□□ -0.61
MECP2-218ENST00000629277 HECTD4Q9Y4D8 3996 aa11.23□□□□□ -0.61
MECP2-218ENST00000629277 LCA10Q71F78 164 aa11.23□□□□□ -0.61
MECP2-218ENST00000629277 SPAG11AQ6PDA7 123 aa11.23□□□□□ -0.61
MECP2-218ENST00000629277 SPACA4Q8TDM5 124 aa11.23□□□□□ -0.61
MECP2-218ENST00000629277 SPTSSBQ8NFR3 76 aa11.22□□□□□ -0.61
MECP2-218ENST00000629277 MDFIQ99750 246 aa11.21□□□□□ -0.61
MECP2-218ENST00000629277 STARD9Q9P2P6 4700 aa11.21□□□□□ -0.62
MECP2-218ENST00000629277 Q6ZR54 194 aa11.21□□□□□ -0.62
MECP2-218ENST00000629277 TP53AIP1Q9HCN2 124 aa11.21□□□□□ -0.62
MECP2-218ENST00000629277 A0A1B0GVX0 72 aa11.2□□□□□ -0.62
MECP2-218ENST00000629277 A6NED7 52 aa11.2□□□□□ -0.62
MECP2-218ENST00000629277 WWC2-AS2Q96NR7 200 aa11.19□□□□□ -0.62
MECP2-218ENST00000629277 LINC00483Q53H64 154 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms