RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 MUC17Q685J3 4493 aa12.4□□□□□ -0.42
SF1-220ENST00000626028 SEC61BP60468 96 aaKnown RBP12.39□□□□□ -0.43
SF1-220ENST00000626028 C2orf91Q6ZV80 131 aa12.39□□□□□ -0.43
SF1-220ENST00000626028 RAB37Q96AX2 223 aa12.39□□□□□ -0.43
SF1-220ENST00000626028 TMEM238LA0A1B0GVL6 79 aa12.37□□□□□ -0.43
SF1-220ENST00000626028 A6NJY4 79 aa12.37□□□□□ -0.43
SF1-220ENST00000626028 SNCGO76070 127 aa12.37□□□□□ -0.43
SF1-220ENST00000626028 XP32Q5T750 250 aa12.37□□□□□ -0.43
SF1-220ENST00000626028 Q6JHZ5 121 aa12.37□□□□□ -0.43
SF1-220ENST00000626028 IGLV8-61A0A075B6I0 122 aa12.36□□□□□ -0.43
SF1-220ENST00000626028 H0YGX0 51 aa12.35□□□□□ -0.43
SF1-220ENST00000626028 CEND1Q8N111 149 aa12.34□□□□□ -0.43
SF1-220ENST00000626028 OCIAD2Q56VL3 154 aa12.33□□□□□ -0.44
SF1-220ENST00000626028 TCL1BO95988 128 aa12.32□□□□□ -0.44
SF1-220ENST00000626028 PYY3Q5JQD4 70 aa12.3□□□□□ -0.44
SF1-220ENST00000626028 CLEC2BQ92478 149 aa12.3□□□□□ -0.44
SF1-220ENST00000626028 PRO1854Q9UHT4 67 aa12.3□□□□□ -0.44
SF1-220ENST00000626028 C1orf195Q5TG92 126 aa12.29□□□□□ -0.44
SF1-220ENST00000626028 A0A0G2JQZ4 141 aa12.28□□□□□ -0.44
SF1-220ENST00000626028 SNHG12Q9BXW3 62 aa12.28□□□□□ -0.44
SF1-220ENST00000626028 GHRHP01286 108 aa12.27□□□□□ -0.45
SF1-220ENST00000626028 A0A1B0GX51 115 aa12.26□□□□□ -0.45
SF1-220ENST00000626028 IGFL1Q6UW32 110 aa12.24□□□□□ -0.45
SF1-220ENST00000626028 HSD52Q0P140 79 aa12.23□□□□□ -0.45
SF1-220ENST00000626028 TRBV7-7A0A0K0K1E9 115 aa12.22□□□□□ -0.45
SF1-220ENST00000626028 FXYD2P54710 66 aa12.22□□□□□ -0.45
SF1-220ENST00000626028 FAM218AQ96MZ4 157 aa12.19□□□□□ -0.46
SF1-220ENST00000626028 LCE2AQ5TA79 106 aaPredicted RBP12.18□□□□□ -0.46
SF1-220ENST00000626028 TMA7Q9Y2S6 64 aaKnown RBP12.18□□□□□ -0.46
SF1-220ENST00000626028 C9orf92A6NGG3 77 aa12.17□□□□□ -0.46
SF1-220ENST00000626028 UQCR10Q9UDW1 63 aa12.17□□□□□ -0.46
SF1-220ENST00000626028 FAT4Q6V0I7 4981 aa12.16□□□□□ -0.46
SF1-220ENST00000626028 NDUFV3P56181 108 aaKnown RBP12.15□□□□□ -0.46
SF1-220ENST00000626028 Q6Q795 121 aa12.15□□□□□ -0.46
SF1-220ENST00000626028 TRIAP1O43715 76 aa12.14□□□□□ -0.47
SF1-220ENST00000626028 H3BQ85 93 aa12.13□□□□□ -0.47
SF1-220ENST00000626028 H3BUT2 72 aa12.12□□□□□ -0.47
SF1-220ENST00000626028 KRTAP4-1Q9BYQ7 146 aa12.12□□□□□ -0.47
SF1-220ENST00000626028 COX6CP09669 75 aa12.1□□□□□ -0.47
SF1-220ENST00000626028 TEN1Q86WV5 123 aa12.1□□□□□ -0.47
SF1-220ENST00000626028 SS18L2Q9UHA2 77 aa12.1□□□□□ -0.47
SF1-220ENST00000626028 DNAL4O96015 105 aa12.08□□□□□ -0.48
SF1-220ENST00000626028 PSMB2P49721 201 aa12.08□□□□□ -0.48
SF1-220ENST00000626028 H3BMG7 143 aa12.06□□□□□ -0.48
SF1-220ENST00000626028 LST1O00453 97 aa12.06□□□□□ -0.48
SF1-220ENST00000626028 FABP2P12104 132 aa12.06□□□□□ -0.48
SF1-220ENST00000626028 PCOTHQ58A44 107 aa12.06□□□□□ -0.48
SF1-220ENST00000626028 K7ERJ3 54 aa12.04□□□□□ -0.48
SF1-220ENST00000626028 ORMDL1Q9P0S3 153 aa12.04□□□□□ -0.48
SF1-220ENST00000626028 RPL37P61927 97 aaKnown RBP12.03□□□□□ -0.48
SF1-220ENST00000626028 TMEM256-PLSCR3K7ERE1 68 aa12.01□□□□□ -0.49
SF1-220ENST00000626028 A0A087WSZ3 146 aa11.95□□□□□ -0.5
SF1-220ENST00000626028 TRACP01848 142 aa11.95□□□□□ -0.5
SF1-220ENST00000626028 TRBV7-4A0A0J9YYF1 115 aa11.93□□□□□ -0.5
SF1-220ENST00000626028 UBE2V1Q13404 147 aa11.93□□□□□ -0.5
SF1-220ENST00000626028 ANKRD29Q8N6D5 301 aa11.93□□□□□ -0.5
SF1-220ENST00000626028 A0A1W2PNM2 257 aa11.91□□□□□ -0.5
SF1-220ENST00000626028 OBSCN-AS1Q96MR7 158 aa11.91□□□□□ -0.5
SF1-220ENST00000626028 SCGB1C2P0DMR2 95 aa11.9□□□□□ -0.5
SF1-220ENST00000626028 Q75L30 129 aa11.9□□□□□ -0.5
SF1-220ENST00000626028 M0R143 59 aa11.89□□□□□ -0.51
SF1-220ENST00000626028 SMIM6P0DI80 62 aa11.89□□□□□ -0.51
SF1-220ENST00000626028 Q96NJ1 140 aa11.87□□□□□ -0.51
SF1-220ENST00000626028 KRTAP19-2Q3LHN2 52 aa11.85□□□□□ -0.51
SF1-220ENST00000626028 LCE2CQ5TA81 110 aa11.85□□□□□ -0.51
SF1-220ENST00000626028 ATP11AUNQ6ZP68 121 aa11.84□□□□□ -0.51
SF1-220ENST00000626028 CCKP06307 115 aa11.81□□□□□ -0.52
SF1-220ENST00000626028 RBM3P98179 157 aaKnown RBP11.79□□□□□ -0.52
SF1-220ENST00000626028 C20orf166-AS1Q96NR2 134 aa11.79□□□□□ -0.52
SF1-220ENST00000626028 A0A1B0GV72 72 aa11.77□□□□□ -0.53
SF1-220ENST00000626028 C21orf62-AS1Q17RA5 79 aa11.77□□□□□ -0.53
SF1-220ENST00000626028 DSCR8Q96T75 97 aa11.77□□□□□ -0.53
SF1-220ENST00000626028 KRTAP9-2Q9BYQ4 174 aa11.76□□□□□ -0.53
SF1-220ENST00000626028 A8MUU9 505 aa11.75□□□□□ -0.53
SF1-220ENST00000626028 BAALC-AS2P0C853 105 aa11.75□□□□□ -0.53
SF1-220ENST00000626028 SIGMAR1Q99720 223 aa11.75□□□□□ -0.53
SF1-220ENST00000626028 IGKV4-1P06312 121 aa11.74□□□□□ -0.53
SF1-220ENST00000626028 ATXN8Q156A1 80 aa11.74□□□□□ -0.53
SF1-220ENST00000626028 TSTD3H0UI37 97 aa11.73□□□□□ -0.53
SF1-220ENST00000626028 LINC00472Q9H8W2 130 aa11.73□□□□□ -0.53
SF1-220ENST00000626028 LINC00313P59037 77 aa11.7□□□□□ -0.54
SF1-220ENST00000626028 MT1HP80294 61 aa11.7□□□□□ -0.54
SF1-220ENST00000626028 LYRM7Q5U5X0 104 aa11.7□□□□□ -0.54
SF1-220ENST00000626028 C9JAW5 83 aa11.69□□□□□ -0.54
SF1-220ENST00000626028 JMJD7-PLA2G4BH0Y9G9 81 aa11.67□□□□□ -0.54
SF1-220ENST00000626028 DSCR10P59022 87 aa11.67□□□□□ -0.54
SF1-220ENST00000626028 A0A1B0GW54 56 aa11.66□□□□□ -0.54
SF1-220ENST00000626028 VPS25Q9BRG1 176 aa11.66□□□□□ -0.54
SF1-220ENST00000626028 TRBV20-1A0A075B6N2 111 aa11.65□□□□□ -0.54
SF1-220ENST00000626028 COX6B2Q6YFQ2 88 aa11.65□□□□□ -0.54
SF1-220ENST00000626028 PDE6GP18545 87 aa11.63□□□□□ -0.55
SF1-220ENST00000626028 NAA38Q9BRA0 125 aaKnown RBP11.62□□□□□ -0.55
SF1-220ENST00000626028 J3KT08 172 aa11.61□□□□□ -0.55
SF1-220ENST00000626028 LOC110117498A0A087WWA1 95 aa11.6□□□□□ -0.55
SF1-220ENST00000626028 KRTAP16-1A8MUX0 517 aa11.6□□□□□ -0.55
SF1-220ENST00000626028 DEFB116Q30KQ4 102 aa11.6□□□□□ -0.55
SF1-220ENST00000626028 Q6ZQT0 140 aa11.59□□□□□ -0.55
SF1-220ENST00000626028 LOC105371267A0A1B0GV96 52 aa11.58□□□□□ -0.56
SF1-220ENST00000626028 C8orf87E5RJ46 101 aa11.57□□□□□ -0.56
SF1-220ENST00000626028 IGHV6-1A0A0B4J1U7 121 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms