RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 C6orf99Q4VX62 202 aa7.5□□□□□ -1.21
SNX1-214ENST00000625244 COX7BP24311 80 aa7.49□□□□□ -1.21
SNX1-214ENST00000625244 LOC105371267A0A1B0GV96 52 aa7.48□□□□□ -1.21
SNX1-214ENST00000625244 VAMP3Q15836 100 aa7.48□□□□□ -1.21
SNX1-214ENST00000625244 SMCR5Q8TEV8 140 aa7.48□□□□□ -1.21
SNX1-214ENST00000625244 DHRS4-AS1Q9P1J3 65 aa7.48□□□□□ -1.21
SNX1-214ENST00000625244 TRBV7-6A0A0J9YX20 115 aa7.47□□□□□ -1.21
SNX1-214ENST00000625244 A0A1B0GWB2 263 aa7.47□□□□□ -1.21
SNX1-214ENST00000625244 SLC25A20O43772 301 aa7.47□□□□□ -1.21
SNX1-214ENST00000625244 SMIM11BQ8TCY0 68 aa7.47□□□□□ -1.21
SNX1-214ENST00000625244 PRO1933Q9H354 126 aa7.47□□□□□ -1.21
SNX1-214ENST00000625244 A0A0B4J2C4 111 aa7.46□□□□□ -1.22
SNX1-214ENST00000625244 TSTD3H0UI37 97 aa7.46□□□□□ -1.22
SNX1-214ENST00000625244 ELOF1P60002 83 aaKnown RBP7.46□□□□□ -1.22
SNX1-214ENST00000625244 RPS29P62273 56 aaKnown RBP7.46□□□□□ -1.22
SNX1-214ENST00000625244 NHP2Q9NX24 153 aaKnown RBP7.46□□□□□ -1.22
SNX1-214ENST00000625244 H7C2G1 150 aa7.45□□□□□ -1.22
SNX1-214ENST00000625244 CFC1P0CG37 223 aa7.45□□□□□ -1.22
SNX1-214ENST00000625244 Q1RN00 199 aa7.45□□□□□ -1.22
SNX1-214ENST00000625244 Q9BRP9 147 aa7.45□□□□□ -1.22
SNX1-214ENST00000625244 FXYD2P54710 66 aa7.43□□□□□ -1.22
SNX1-214ENST00000625244 BVES-AS1Q5T3Y7 98 aa7.43□□□□□ -1.22
SNX1-214ENST00000625244 KRTAP9-8Q9BYQ0 159 aa7.43□□□□□ -1.22
SNX1-214ENST00000625244 PRO1854Q9UHT4 67 aa7.43□□□□□ -1.22
SNX1-214ENST00000625244 GAGE2AQ6NT46 116 aa7.42□□□□□ -1.22
SNX1-214ENST00000625244 C9orf92A6NGG3 77 aa7.41□□□□□ -1.22
SNX1-214ENST00000625244 M0R143 59 aa7.41□□□□□ -1.22
SNX1-214ENST00000625244 ERC2-IT1O76042 136 aa7.41□□□□□ -1.22
SNX1-214ENST00000625244 SNCGO76070 127 aa7.41□□□□□ -1.22
SNX1-214ENST00000625244 NEBP20929 6669 aa7.41□□□□□ -1.22
SNX1-214ENST00000625244 MOBPQ13875 183 aa7.39□□□□□ -1.23
SNX1-214ENST00000625244 H0YGX0 51 aa7.37□□□□□ -1.23
SNX1-214ENST00000625244 PSMB2P49721 201 aa7.37□□□□□ -1.23
SNX1-214ENST00000625244 LINC00483Q53H64 154 aa7.37□□□□□ -1.23
SNX1-214ENST00000625244 ST20-AS1Q8NBB2 130 aa7.37□□□□□ -1.23
SNX1-214ENST00000625244 IGLV9-49A0A0B4J1Y8 123 aa7.36□□□□□ -1.23
SNX1-214ENST00000625244 hADV29S1A0JD25 119 aa7.36□□□□□ -1.23
SNX1-214ENST00000625244 LINC00575Q6W349 94 aa7.36□□□□□ -1.23
SNX1-214ENST00000625244 DEFB105AQ8NG35 78 aa7.36□□□□□ -1.23
SNX1-214ENST00000625244 K7ERJ3 54 aa7.35□□□□□ -1.23
SNX1-214ENST00000625244 COX6CP09669 75 aa7.35□□□□□ -1.23
SNX1-214ENST00000625244 SSBP3-AS1Q7Z2R9 100 aa7.35□□□□□ -1.23
SNX1-214ENST00000625244 LAMTOR3Q9UHA4 124 aa7.35□□□□□ -1.23
SNX1-214ENST00000625244 TEX49A0A1B0GTD5 131 aa7.34□□□□□ -1.23
SNX1-214ENST00000625244 C9orf153Q5TBE3 101 aa7.34□□□□□ -1.23
SNX1-214ENST00000625244 SPRR1BP22528 89 aa7.32□□□□□ -1.24
SNX1-214ENST00000625244 KRTAP6-3Q3LI67 103 aa7.32□□□□□ -1.24
SNX1-214ENST00000625244 TRIAP1O43715 76 aa7.31□□□□□ -1.24
SNX1-214ENST00000625244 GHRHP01286 108 aa7.31□□□□□ -1.24
SNX1-214ENST00000625244 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.31□□□□□ -1.24
SNX1-214ENST00000625244 Q6ZQY7 126 aa7.31□□□□□ -1.24
SNX1-214ENST00000625244 IGLV5-48A0A075B6I7 105 aa7.3□□□□□ -1.24
SNX1-214ENST00000625244 A0A1B0GX51 115 aa7.3□□□□□ -1.24
SNX1-214ENST00000625244 BATFQ16520 125 aa7.3□□□□□ -1.24
SNX1-214ENST00000625244 LOC100996750A0A140TA64 210 aa7.29□□□□□ -1.24
SNX1-214ENST00000625244 F8WEM9 126 aa7.29□□□□□ -1.24
SNX1-214ENST00000625244 DNAL4O96015 105 aa7.29□□□□□ -1.24
SNX1-214ENST00000625244 SCGB1C2P0DMR2 95 aa7.29□□□□□ -1.24
SNX1-214ENST00000625244 OCIAD2Q56VL3 154 aa7.29□□□□□ -1.24
SNX1-214ENST00000625244 Q6Q795 121 aa7.29□□□□□ -1.24
SNX1-214ENST00000625244 KRTAP4-6Q9BYQ5 205 aa7.29□□□□□ -1.24
SNX1-214ENST00000625244 MUC12Q9UKN1 5478 aa7.28□□□□□ -1.24
SNX1-214ENST00000625244 PPDPFLQ8WWR9 84 aa7.28□□□□□ -1.24
SNX1-214ENST00000625244 RPL37P61927 97 aaKnown RBP7.26□□□□□ -1.25
SNX1-214ENST00000625244 SNHG12Q9BXW3 62 aa7.26□□□□□ -1.25
SNX1-214ENST00000625244 LYRM7Q5U5X0 104 aa7.25□□□□□ -1.25
SNX1-214ENST00000625244 CLEC2BQ92478 149 aa7.25□□□□□ -1.25
SNX1-214ENST00000625244 FAM218AQ96MZ4 157 aa7.25□□□□□ -1.25
SNX1-214ENST00000625244 MT2AP02795 61 aa7.24□□□□□ -1.25
SNX1-214ENST00000625244 H3BQ85 93 aa7.23□□□□□ -1.25
SNX1-214ENST00000625244 KRTAP9-3Q9BYQ3 159 aa7.22□□□□□ -1.25
SNX1-214ENST00000625244 FABP2P12104 132 aa7.21□□□□□ -1.26
SNX1-214ENST00000625244 SMIM29Q86T20 159 aa7.21□□□□□ -1.26
SNX1-214ENST00000625244 ORMDL1Q9P0S3 153 aa7.21□□□□□ -1.26
SNX1-214ENST00000625244 TRACP01848 142 aa7.2□□□□□ -1.26
SNX1-214ENST00000625244 LST1O00453 97 aa7.19□□□□□ -1.26
SNX1-214ENST00000625244 MT1FP04733 61 aa7.19□□□□□ -1.26
SNX1-214ENST00000625244 KRTAP19-6Q3LI70 58 aa7.19□□□□□ -1.26
SNX1-214ENST00000625244 Q6JHZ5 121 aa7.19□□□□□ -1.26
SNX1-214ENST00000625244 NAA38Q9BRA0 125 aaKnown RBP7.19□□□□□ -1.26
SNX1-214ENST00000625244 LINC00846Q9NV44 126 aa7.19□□□□□ -1.26
SNX1-214ENST00000625244 TMEM256-PLSCR3K7ERE1 68 aa7.18□□□□□ -1.26
SNX1-214ENST00000625244 ATXN8Q156A1 80 aa7.18□□□□□ -1.26
SNX1-214ENST00000625244 LIMD2Q9BT23 127 aa7.18□□□□□ -1.26
SNX1-214ENST00000625244 NDUFV3P56181 108 aaKnown RBP7.17□□□□□ -1.26
SNX1-214ENST00000625244 CD164Q04900 197 aa7.17□□□□□ -1.26
SNX1-214ENST00000625244 HRCT1Q6UXD1 115 aa7.17□□□□□ -1.26
SNX1-214ENST00000625244 PCP4L1A6NKN8 68 aa7.16□□□□□ -1.26
SNX1-214ENST00000625244 H3BUT2 72 aa7.16□□□□□ -1.26
SNX1-214ENST00000625244 TRBV20-1A0A075B6N2 111 aa7.15□□□□□ -1.26
SNX1-214ENST00000625244 C9orf118A6NHY6 69 aa7.15□□□□□ -1.26
SNX1-214ENST00000625244 H3BMG7 143 aa7.14□□□□□ -1.27
SNX1-214ENST00000625244 COL5A1-AS1Q5SY13 56 aa7.14□□□□□ -1.27
SNX1-214ENST00000625244 TCL1BO95988 128 aa7.13□□□□□ -1.27
SNX1-214ENST00000625244 KRTAP20-1Q3LI63 56 aa7.13□□□□□ -1.27
SNX1-214ENST00000625244 TAX1BP3O14907 124 aa7.12□□□□□ -1.27
SNX1-214ENST00000625244 IGFL1Q6UW32 110 aa7.12□□□□□ -1.27
SNX1-214ENST00000625244 A0A1W2PPM0 123 aa7.11□□□□□ -1.27
SNX1-214ENST00000625244 UBE2V1Q13404 147 aa7.11□□□□□ -1.27
SNX1-214ENST00000625244 BAALC-AS2P0C853 105 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms