RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 PRR26Q8N8Z3 221 aa7.58□□□□□ -1.2
PNKP-217ENST00000625216 H3BT86 120 aa7.57□□□□□ -1.2
PNKP-217ENST00000625216 KRTAP1-4P0C5Y4 121 aa7.57□□□□□ -1.2
PNKP-217ENST00000625216 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.57□□□□□ -1.2
PNKP-217ENST00000625216 HIGD2AQ9BW72 106 aa7.57□□□□□ -1.2
PNKP-217ENST00000625216 ST20-AS1Q8NBB2 130 aa7.56□□□□□ -1.2
PNKP-217ENST00000625216 ORMDL1Q9P0S3 153 aa7.56□□□□□ -1.2
PNKP-217ENST00000625216 F8W1H4 67 aa7.55□□□□□ -1.2
PNKP-217ENST00000625216 SNCGO76070 127 aa7.55□□□□□ -1.2
PNKP-217ENST00000625216 LINC01547P58512 204 aaPredicted RBP7.55□□□□□ -1.2
PNKP-217ENST00000625216 ANKRD29Q8N6D5 301 aa7.55□□□□□ -1.2
PNKP-217ENST00000625216 BAALC-AS2P0C853 105 aa7.54□□□□□ -1.2
PNKP-217ENST00000625216 IGLV5-48A0A075B6I7 105 aa7.51□□□□□ -1.21
PNKP-217ENST00000625216 Q8N377 158 aa7.51□□□□□ -1.21
PNKP-217ENST00000625216 OCIAD2Q56VL3 154 aa7.5□□□□□ -1.21
PNKP-217ENST00000625216 DEFB105AQ8NG35 78 aa7.5□□□□□ -1.21
PNKP-217ENST00000625216 ETDBQ3ZM63 59 aa7.49□□□□□ -1.21
PNKP-217ENST00000625216 TMEM256-PLSCR3K7ERE1 68 aa7.48□□□□□ -1.21
PNKP-217ENST00000625216 TEN1Q86WV5 123 aa7.48□□□□□ -1.21
PNKP-217ENST00000625216 RNF213Q63HN8 5207 aa7.48□□□□□ -1.21
PNKP-217ENST00000625216 H3BQ85 93 aa7.47□□□□□ -1.21
PNKP-217ENST00000625216 CRYGAP11844 174 aa7.47□□□□□ -1.21
PNKP-217ENST00000625216 SPRR1BP22528 89 aa7.47□□□□□ -1.21
PNKP-217ENST00000625216 C3orf22Q8N5N4 141 aa7.47□□□□□ -1.21
PNKP-217ENST00000625216 PPDPFLQ8WWR9 84 aa7.47□□□□□ -1.21
PNKP-217ENST00000625216 SPRR4Q96PI1 79 aa7.47□□□□□ -1.21
PNKP-217ENST00000625216 A0A1B0GV72 72 aa7.46□□□□□ -1.22
PNKP-217ENST00000625216 TEX49A0A1B0GTD5 131 aa7.45□□□□□ -1.22
PNKP-217ENST00000625216 GAGE2AQ6NT46 116 aa7.45□□□□□ -1.22
PNKP-217ENST00000625216 SMIM29Q86T20 159 aa7.45□□□□□ -1.22
PNKP-217ENST00000625216 GHRHP01286 108 aa7.44□□□□□ -1.22
PNKP-217ENST00000625216 NDUFV3P56181 108 aaKnown RBP7.44□□□□□ -1.22
PNKP-217ENST00000625216 TYMSOSQ8TAI1 123 aa7.44□□□□□ -1.22
PNKP-217ENST00000625216 OBSCN-AS1Q96MR7 158 aa7.44□□□□□ -1.22
PNKP-217ENST00000625216 LAMTOR3Q9UHA4 124 aa7.44□□□□□ -1.22
PNKP-217ENST00000625216 A0A087X002 238 aa7.43□□□□□ -1.22
PNKP-217ENST00000625216 FAM229BQ4G0N7 80 aa7.43□□□□□ -1.22
PNKP-217ENST00000625216 LINC00483Q53H64 154 aa7.43□□□□□ -1.22
PNKP-217ENST00000625216 ZNF706Q9Y5V0 76 aaPredicted RBP7.43□□□□□ -1.22
PNKP-217ENST00000625216 LPAP08519 4548 aa7.42□□□□□ -1.22
PNKP-217ENST00000625216 C14orf132Q9NPU4 83 aa7.41□□□□□ -1.22
PNKP-217ENST00000625216 ANAPC11Q9NYG5 84 aa7.41□□□□□ -1.22
PNKP-217ENST00000625216 JMJD7-PLA2G4BH0Y9G9 81 aa7.4□□□□□ -1.22
PNKP-217ENST00000625216 PRR4Q16378 134 aa7.39□□□□□ -1.23
PNKP-217ENST00000625216 IGLV8-61A0A075B6I0 122 aa7.37□□□□□ -1.23
PNKP-217ENST00000625216 TRBV7-4A0A0J9YYF1 115 aa7.37□□□□□ -1.23
PNKP-217ENST00000625216 RBM3P98179 157 aaKnown RBP7.37□□□□□ -1.23
PNKP-217ENST00000625216 KRTAP13-2Q52LG2 175 aa7.37□□□□□ -1.23
PNKP-217ENST00000625216 F8WEM9 126 aa7.36□□□□□ -1.23
PNKP-217ENST00000625216 LOC110117498A0A087WWA1 95 aa7.35□□□□□ -1.23
PNKP-217ENST00000625216 IGLV9-49A0A0B4J1Y8 123 aa7.35□□□□□ -1.23
PNKP-217ENST00000625216 Q6ZQT0 140 aa7.35□□□□□ -1.23
PNKP-217ENST00000625216 A0A0G2JQZ4 141 aa7.34□□□□□ -1.23
PNKP-217ENST00000625216 IGFL1Q6UW32 110 aa7.34□□□□□ -1.23
PNKP-217ENST00000625216 LINC00304Q8N9R0 145 aa7.34□□□□□ -1.23
PNKP-217ENST00000625216 MOBPQ13875 183 aa7.33□□□□□ -1.24
PNKP-217ENST00000625216 C9orf153Q5TBE3 101 aa7.33□□□□□ -1.24
PNKP-217ENST00000625216 DSCR8Q96T75 97 aa7.33□□□□□ -1.24
PNKP-217ENST00000625216 CCKP06307 115 aa7.31□□□□□ -1.24
PNKP-217ENST00000625216 Q8NBF4 154 aa7.31□□□□□ -1.24
PNKP-217ENST00000625216 A0A1W2PNM2 257 aa7.3□□□□□ -1.24
PNKP-217ENST00000625216 SPAG11AQ6PDA7 123 aa7.3□□□□□ -1.24
PNKP-217ENST00000625216 PDE6GP18545 87 aa7.29□□□□□ -1.24
PNKP-217ENST00000625216 Q6JHZ5 121 aa7.29□□□□□ -1.24
PNKP-217ENST00000625216 VPS25Q9BRG1 176 aa7.29□□□□□ -1.24
PNKP-217ENST00000625216 K7ERU9 68 aa7.28□□□□□ -1.24
PNKP-217ENST00000625216 J3QR89 54 aa7.27□□□□□ -1.25
PNKP-217ENST00000625216 FAM240AA0A1B0GVK7 77 aa7.26□□□□□ -1.25
PNKP-217ENST00000625216 C4orf48Q5BLP8 95 aa7.26□□□□□ -1.25
PNKP-217ENST00000625216 C21orf62-AS1Q17RA5 79 aa7.24□□□□□ -1.25
PNKP-217ENST00000625216 MUC2Q02817 5179 aa7.24□□□□□ -1.25
PNKP-217ENST00000625216 Q6Q795 121 aa7.23□□□□□ -1.25
PNKP-217ENST00000625216 SSBP3-AS1Q7Z2R9 100 aa7.23□□□□□ -1.25
PNKP-217ENST00000625216 RETNLBQ9BQ08 111 aa7.23□□□□□ -1.25
PNKP-217ENST00000625216 LINC00846Q9NV44 126 aa7.23□□□□□ -1.25
PNKP-217ENST00000625216 IGLV7-46A0A075B6I9 117 aa7.22□□□□□ -1.25
PNKP-217ENST00000625216 TPRXLQ17RH7 258 aa7.22□□□□□ -1.25
PNKP-217ENST00000625216 SPINK1P00995 79 aa7.21□□□□□ -1.26
PNKP-217ENST00000625216 ACYP1P07311 99 aa7.21□□□□□ -1.26
PNKP-217ENST00000625216 HRCT1Q6UXD1 115 aa7.21□□□□□ -1.26
PNKP-217ENST00000625216 CDIP1Q9H305 208 aa7.21□□□□□ -1.26
PNKP-217ENST00000625216 TRBV7-7A0A0K0K1E9 115 aa7.2□□□□□ -1.26
PNKP-217ENST00000625216 FP248Q71RG6 208 aaPredicted RBP7.2□□□□□ -1.26
PNKP-217ENST00000625216 A0A087WSZ3 146 aa7.19□□□□□ -1.26
PNKP-217ENST00000625216 A0A1B0GW54 56 aa7.17□□□□□ -1.26
PNKP-217ENST00000625216 RPS29P62273 56 aaKnown RBP7.17□□□□□ -1.26
PNKP-217ENST00000625216 CD164Q04900 197 aa7.17□□□□□ -1.26
PNKP-217ENST00000625216 A0A0U1RQV1 116 aa7.16□□□□□ -1.26
PNKP-217ENST00000625216 Q6ZVQ6 151 aa7.16□□□□□ -1.26
PNKP-217ENST00000625216 MUC17Q685J3 4493 aa7.16□□□□□ -1.26
PNKP-217ENST00000625216 UBL5Q9BZL1 73 aa7.14□□□□□ -1.27
PNKP-217ENST00000625216 NREPQ16612 68 aa7.12□□□□□ -1.27
PNKP-217ENST00000625216 LINC00643Q86TS7 51 aa7.1□□□□□ -1.27
PNKP-217ENST00000625216 Q96NJ1 140 aa7.1□□□□□ -1.27
PNKP-217ENST00000625216 SS18L2Q9UHA2 77 aa7.1□□□□□ -1.27
PNKP-217ENST00000625216 KRTAP13-3Q3SY46 172 aa7.09□□□□□ -1.27
PNKP-217ENST00000625216 IGKV3D-7A0A0C4DH55 119 aa7.08□□□□□ -1.28
PNKP-217ENST00000625216 MT-ATP8P03928 68 aa7.08□□□□□ -1.28
PNKP-217ENST00000625216 Q5XG85 94 aa7.08□□□□□ -1.28
PNKP-217ENST00000625216 LINC00472Q9H8W2 130 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms