RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 C20orf166-AS1Q96NR2 134 aa3.86□□□□□ -1.79
CDKL5-205ENST00000623535 P0C880 135 aa3.85□□□□□ -1.79
CDKL5-205ENST00000623535 SPRR1BP22528 89 aa3.85□□□□□ -1.79
CDKL5-205ENST00000623535 PRO2289Q9P1D8 64 aa3.84□□□□□ -1.79
CDKL5-205ENST00000623535 A0A096LNJ9 63 aa3.84□□□□□ -1.79
CDKL5-205ENST00000623535 ADM2Q7Z4H4 148 aa3.84□□□□□ -1.8
CDKL5-205ENST00000623535 KRTAP1-1Q07627 177 aa3.84□□□□□ -1.8
CDKL5-205ENST00000623535 KRTAP1-3Q8IUG1 177 aa3.83□□□□□ -1.8
CDKL5-205ENST00000623535 URB1-AS1Q96HZ7 61 aa3.82□□□□□ -1.8
CDKL5-205ENST00000623535 KRTAP10-1P60331 282 aa3.82□□□□□ -1.8
CDKL5-205ENST00000623535 RPS29P62273 56 aaKnown RBP3.82□□□□□ -1.8
CDKL5-205ENST00000623535 KLKP1Q107X0 134 aa3.82□□□□□ -1.8
CDKL5-205ENST00000623535 Q8N9P0 234 aaPredicted RBP3.81□□□□□ -1.8
CDKL5-205ENST00000623535 A0A0G2JQZ4 141 aa3.8□□□□□ -1.8
CDKL5-205ENST00000623535 ROMO1P60602 79 aa3.8□□□□□ -1.8
CDKL5-205ENST00000623535 PANO1I0J062 215 aa3.78□□□□□ -1.8
CDKL5-205ENST00000623535 Q5W150 140 aa3.78□□□□□ -1.8
CDKL5-205ENST00000623535 TNP1P09430 55 aa3.78□□□□□ -1.8
CDKL5-205ENST00000623535 ITPR2Q14571 2701 aa3.78□□□□□ -1.81
CDKL5-205ENST00000623535 A8MUU9 505 aa3.76□□□□□ -1.81
CDKL5-205ENST00000623535 SPATA8Q6RVD6 105 aa3.76□□□□□ -1.81
CDKL5-205ENST00000623535 GCN1Q92616 2671 aaKnown RBP3.76□□□□□ -1.81
CDKL5-205ENST00000623535 KRTAP10-2P60368 255 aa3.76□□□□□ -1.81
CDKL5-205ENST00000623535 CHD6Q8TD26 2715 aa3.74□□□□□ -1.81
CDKL5-205ENST00000623535 MMP24-AS1A0A0U1RRL7 71 aa3.73□□□□□ -1.81
CDKL5-205ENST00000623535 Q75L30 129 aa3.73□□□□□ -1.81
CDKL5-205ENST00000623535 UTP20O75691 2785 aaKnown RBP3.72□□□□□ -1.81
CDKL5-205ENST00000623535 FLNCQ14315 2725 aa3.72□□□□□ -1.81
CDKL5-205ENST00000623535 LINC00310P59036 64 aa3.71□□□□□ -1.82
CDKL5-205ENST00000623535 NSD1Q96L73 2696 aaPredicted RBP3.71□□□□□ -1.82
CDKL5-205ENST00000623535 Q6ZR54 194 aa3.7□□□□□ -1.82
CDKL5-205ENST00000623535 MAP1AP78559 2803 aaPredicted RBP3.69□□□□□ -1.82
CDKL5-205ENST00000623535 ZNF292O60281 2723 aa3.68□□□□□ -1.82
CDKL5-205ENST00000623535 Q8NDZ9 215 aa3.68□□□□□ -1.82
CDKL5-205ENST00000623535 KRTAP10-8P60410 259 aa3.67□□□□□ -1.82
CDKL5-205ENST00000623535 SPRR1AP35321 89 aa3.66□□□□□ -1.82
CDKL5-205ENST00000623535 LINC01558Q9Y6Z2 57 aa3.66□□□□□ -1.82
CDKL5-205ENST00000623535 SMCPP49901 116 aaPredicted RBP3.65□□□□□ -1.83
CDKL5-205ENST00000623535 LINC00472Q9H8W2 130 aa3.63□□□□□ -1.83
CDKL5-205ENST00000623535 PRO0461Q9UI25 63 aa3.63□□□□□ -1.83
CDKL5-205ENST00000623535 OCR1Q9BZK8 76 aa3.63□□□□□ -1.83
CDKL5-205ENST00000623535 KRTAP10-10P60014 251 aa3.63□□□□□ -1.83
CDKL5-205ENST00000623535 ASB16-AS1Q495Z4 193 aa3.62□□□□□ -1.83
CDKL5-205ENST00000623535 PP632Q6XCG6 107 aa3.62□□□□□ -1.83
CDKL5-205ENST00000623535 KRTAP1-5Q9BYS1 174 aa3.6□□□□□ -1.83
CDKL5-205ENST00000623535 CENPFP49454 3210 aa3.6□□□□□ -1.83
CDKL5-205ENST00000623535 NOTCH2NLQ7Z3S9 236 aa3.59□□□□□ -1.83
CDKL5-205ENST00000623535 A0A087X002 238 aa3.58□□□□□ -1.84
CDKL5-205ENST00000623535 TPRXLQ17RH7 258 aa3.56□□□□□ -1.84
CDKL5-205ENST00000623535 Q5XG85 94 aa3.56□□□□□ -1.84
CDKL5-205ENST00000623535 C10orf95Q9H7T3 257 aa3.55□□□□□ -1.84
CDKL5-205ENST00000623535 KRTAP26-1Q6PEX3 210 aa3.55□□□□□ -1.84
CDKL5-205ENST00000623535 CHD9Q3L8U1 2897 aa3.54□□□□□ -1.84
CDKL5-205ENST00000623535 Q6ZRN7 208 aaPredicted RBP3.54□□□□□ -1.84
CDKL5-205ENST00000623535 EIF4EBP3O60516 100 aaPredicted RBP3.52□□□□□ -1.85
CDKL5-205ENST00000623535 KRTAP16-1A8MUX0 517 aa3.5□□□□□ -1.85
CDKL5-205ENST00000623535 KRTAP29-1A8MX34 341 aaPredicted RBP3.49□□□□□ -1.85
CDKL5-205ENST00000623535 A0A1B0GVY2 172 aa3.47□□□□□ -1.85
CDKL5-205ENST00000623535 TENM4Q6N022 2769 aa3.47□□□□□ -1.85
CDKL5-205ENST00000623535 KRTAP4-16G5E9R7 235 aaPredicted RBP3.47□□□□□ -1.85
CDKL5-205ENST00000623535 TRANK1O15050 2925 aa3.46□□□□□ -1.86
CDKL5-205ENST00000623535 UBR5O95071 2799 aaPredicted RBP3.46□□□□□ -1.86
CDKL5-205ENST00000623535 TENM1Q9UKZ4 2725 aa3.46□□□□□ -1.86
CDKL5-205ENST00000623535 Q5VV11 94 aa3.45□□□□□ -1.86
CDKL5-205ENST00000623535 TENM3Q9P273 2699 aa3.44□□□□□ -1.86
CDKL5-205ENST00000623535 KRTAP25-1Q3LHN0 102 aa3.44□□□□□ -1.86
CDKL5-205ENST00000623535 APCP25054 2843 aa3.43□□□□□ -1.86
CDKL5-205ENST00000623535 CRYBG3Q68DQ2 2970 aa3.43□□□□□ -1.86
CDKL5-205ENST00000623535 XP32Q5T750 250 aa3.43□□□□□ -1.86
CDKL5-205ENST00000623535 PRAC1Q96KF2 57 aa3.42□□□□□ -1.86
CDKL5-205ENST00000623535 HIVEP1P15822 2718 aa3.41□□□□□ -1.86
CDKL5-205ENST00000623535 CEP350Q5VT06 3117 aa3.4□□□□□ -1.86
CDKL5-205ENST00000623535 H3BS24 57 aa3.38□□□□□ -1.87
CDKL5-205ENST00000623535 KRTAP13-2Q52LG2 175 aa3.38□□□□□ -1.87
CDKL5-205ENST00000623535 A8MU10 97 aa3.38□□□□□ -1.87
CDKL5-205ENST00000623535 FRYQ5TBA9 3013 aa3.37□□□□□ -1.87
CDKL5-205ENST00000623535 NBEAL2Q6ZNJ1 2754 aa3.36□□□□□ -1.87
CDKL5-205ENST00000623535 NDUFAF8A1L188 74 aa3.36□□□□□ -1.87
CDKL5-205ENST00000623535 TNRC18O15417 2968 aaPredicted RBP3.35□□□□□ -1.87
CDKL5-205ENST00000623535 ITPR1Q14643 2758 aa3.35□□□□□ -1.87
CDKL5-205ENST00000623535 EP400Q96L91 3159 aa3.35□□□□□ -1.87
CDKL5-205ENST00000623535 NF1P21359 2839 aa3.33□□□□□ -1.88
CDKL5-205ENST00000623535 A6NN06 94 aa3.33□□□□□ -1.88
CDKL5-205ENST00000623535 KALRNO60229 2985 aa3.32□□□□□ -1.88
CDKL5-205ENST00000623535 REV3LO60673 3130 aa3.29□□□□□ -1.88
CDKL5-205ENST00000623535 DNAH12Q6ZR08 3092 aa3.29□□□□□ -1.88
CDKL5-205ENST00000623535 DSPP15924 2871 aaKnown RBP3.29□□□□□ -1.88
CDKL5-205ENST00000623535 KRTAP13-1Q8IUC0 172 aa3.28□□□□□ -1.89
CDKL5-205ENST00000623535 UTRNP46939 3433 aa3.27□□□□□ -1.89
CDKL5-205ENST00000623535 TENM2Q9NT68 2774 aa3.27□□□□□ -1.89
CDKL5-205ENST00000623535 KRTAP13-3Q3SY46 172 aa3.27□□□□□ -1.89
CDKL5-205ENST00000623535 C5orf42Q9H799 3197 aa3.25□□□□□ -1.89
CDKL5-205ENST00000623535 PDZD2O15018 2839 aa3.24□□□□□ -1.89
CDKL5-205ENST00000623535 SRCAPQ6ZRS2 3230 aa3.23□□□□□ -1.89
CDKL5-205ENST00000623535 GOLGB1Q14789 3259 aaKnown RBP3.22□□□□□ -1.89
CDKL5-205ENST00000623535 KRTAP11-1Q8IUC1 163 aa3.22□□□□□ -1.89
CDKL5-205ENST00000623535 TRIOO75962 3097 aa3.22□□□□□ -1.89
CDKL5-205ENST00000623535 A0A0C4DFX4 3053 aa3.22□□□□□ -1.89
CDKL5-205ENST00000623535 NIPBLQ6KC79 2804 aaeCLIP3.2□□□□□ -1.9
CDKL5-205ENST00000623535 MGAQ8IWI9 3026 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 758.1 ms