RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 V9GYY9 64 aa10□□□□□ -0.81
NPHP4-211ENST00000622020 IGFL1Q6UW32 110 aa9.99□□□□□ -0.81
NPHP4-211ENST00000622020 SPRR4Q96PI1 79 aa9.99□□□□□ -0.81
NPHP4-211ENST00000622020 F8WDY8 70 aa9.99□□□□□ -0.81
NPHP4-211ENST00000622020 PLA2G2DQ9UNK4 145 aa9.98□□□□□ -0.81
NPHP4-211ENST00000622020 C1orf64Q8NEQ6 169 aa9.98□□□□□ -0.81
NPHP4-211ENST00000622020 HCG22E2RYF7 251 aa9.97□□□□□ -0.81
NPHP4-211ENST00000622020 KRTAP24-1Q3LI83 254 aa9.97□□□□□ -0.81
NPHP4-211ENST00000622020 PSPHP1O15172 72 aa9.97□□□□□ -0.81
NPHP4-211ENST00000622020 hDV103S1A0JD37 113 aa9.95□□□□□ -0.82
NPHP4-211ENST00000622020 CHTF8P0CG12 524 aa9.95□□□□□ -0.82
NPHP4-211ENST00000622020 IGLV5-37A0A075B6J1 123 aa9.95□□□□□ -0.82
NPHP4-211ENST00000622020 SEC61GP60059 68 aa9.95□□□□□ -0.82
NPHP4-211ENST00000622020 CMYA5Q8N3K9 4069 aa9.94□□□□□ -0.82
NPHP4-211ENST00000622020 KRTAP1-5Q9BYS1 174 aa9.91□□□□□ -0.82
NPHP4-211ENST00000622020 UBE2AP49459 152 aa9.91□□□□□ -0.82
NPHP4-211ENST00000622020 KRTAP11-1Q8IUC1 163 aa9.91□□□□□ -0.82
NPHP4-211ENST00000622020 LINC00208Q96KT6 92 aa9.9□□□□□ -0.82
NPHP4-211ENST00000622020 PHF5AQ7RTV0 110 aaKnown RBP9.9□□□□□ -0.82
NPHP4-211ENST00000622020 A0A1B0GW54 56 aa9.89□□□□□ -0.83
NPHP4-211ENST00000622020 ZCCHC13Q8WW36 166 aaKnown RBP9.89□□□□□ -0.83
NPHP4-211ENST00000622020 DNAH1Q9P2D7 4330 aa9.88□□□□□ -0.83
NPHP4-211ENST00000622020 LCE6AA0A183 80 aa9.88□□□□□ -0.83
NPHP4-211ENST00000622020 A8MU10 97 aa9.85□□□□□ -0.83
NPHP4-211ENST00000622020 DNAH9Q9NYC9 4486 aa9.84□□□□□ -0.83
NPHP4-211ENST00000622020 TRAV22A0A0B4J277 110 aa9.84□□□□□ -0.83
NPHP4-211ENST00000622020 HUWE1Q7Z6Z7 4374 aaKnown RBP9.84□□□□□ -0.83
NPHP4-211ENST00000622020 MP68P56378 58 aa9.83□□□□□ -0.84
NPHP4-211ENST00000622020 C16orf90A8MZG2 172 aa9.83□□□□□ -0.84
NPHP4-211ENST00000622020 Q1T7F1 81 aa9.82□□□□□ -0.84
NPHP4-211ENST00000622020 PRR15Q8IV56 129 aa9.82□□□□□ -0.84
NPHP4-211ENST00000622020 A8MUN3 132 aa9.81□□□□□ -0.84
NPHP4-211ENST00000622020 CASC2Q6XLA1 102 aa9.81□□□□□ -0.84
NPHP4-211ENST00000622020 H0Y9J4 135 aa9.81□□□□□ -0.84
NPHP4-211ENST00000622020 PMAIP1Q13794 54 aa9.8□□□□□ -0.84
NPHP4-211ENST00000622020 UBE2DNLQ8IWF7 75 aa9.8□□□□□ -0.84
NPHP4-211ENST00000622020 H0Y9P7 68 aa9.79□□□□□ -0.84
NPHP4-211ENST00000622020 K7EIL1 84 aa9.79□□□□□ -0.84
NPHP4-211ENST00000622020 CNBPP62633 177 aaKnown RBP9.77□□□□□ -0.85
NPHP4-211ENST00000622020 DNAH7Q8WXX0 4024 aa9.76□□□□□ -0.85
NPHP4-211ENST00000622020 IGLV9-49A0A0B4J1Y8 123 aa9.74□□□□□ -0.85
NPHP4-211ENST00000622020 B9D2Q9BPU9 175 aa9.74□□□□□ -0.85
NPHP4-211ENST00000622020 KRTAP29-1A8MX34 341 aaPredicted RBP9.74□□□□□ -0.85
NPHP4-211ENST00000622020 PANO1I0J062 215 aa9.74□□□□□ -0.85
NPHP4-211ENST00000622020 DNAH3Q8TD57 4116 aa9.74□□□□□ -0.85
NPHP4-211ENST00000622020 NDUFB1O75438 58 aa9.73□□□□□ -0.85
NPHP4-211ENST00000622020 IGLV8-61A0A075B6I0 122 aa9.72□□□□□ -0.85
NPHP4-211ENST00000622020 CYP4F30PQ9H0H9 118 aa9.71□□□□□ -0.85
NPHP4-211ENST00000622020 PCOTHQ58A44 107 aa9.71□□□□□ -0.86
NPHP4-211ENST00000622020 A8MWP4 228 aa9.7□□□□□ -0.86
NPHP4-211ENST00000622020 LINC00472Q9H8W2 130 aa9.7□□□□□ -0.86
NPHP4-211ENST00000622020 Q5VV11 94 aa9.68□□□□□ -0.86
NPHP4-211ENST00000622020 CHKB-CPT1BH3BT56 60 aa9.66□□□□□ -0.86
NPHP4-211ENST00000622020 ANAPC11Q9NYG5 84 aa9.66□□□□□ -0.86
NPHP4-211ENST00000622020 NDUFS5O43920 106 aa9.64□□□□□ -0.87
NPHP4-211ENST00000622020 SPTSSBQ8NFR3 76 aa9.63□□□□□ -0.87
NPHP4-211ENST00000622020 PRR15LQ9BU68 103 aa9.63□□□□□ -0.87
NPHP4-211ENST00000622020 MMP24-AS1A0A0U1RRL7 71 aa9.62□□□□□ -0.87
NPHP4-211ENST00000622020 C9orf163Q8N9P6 203 aa9.62□□□□□ -0.87
NPHP4-211ENST00000622020 IGHV6-1A0A0B4J1U7 121 aa9.6□□□□□ -0.87
NPHP4-211ENST00000622020 Q8N9P0 234 aaPredicted RBP9.6□□□□□ -0.87
NPHP4-211ENST00000622020 SPRR1BP22528 89 aa9.6□□□□□ -0.87
NPHP4-211ENST00000622020 APLNQ9ULZ1 77 aa9.6□□□□□ -0.87
NPHP4-211ENST00000622020 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.6□□□□□ -0.87
NPHP4-211ENST00000622020 C14orf177Q52M58 125 aa9.58□□□□□ -0.88
NPHP4-211ENST00000622020 PLECQ15149 4684 aaKnown RBP9.58□□□□□ -0.88
NPHP4-211ENST00000622020 FRAS1Q86XX4 4008 aa9.57□□□□□ -0.88
NPHP4-211ENST00000622020 COA5Q86WW8 74 aa9.56□□□□□ -0.88
NPHP4-211ENST00000622020 MOBPQ13875 183 aa9.56□□□□□ -0.88
NPHP4-211ENST00000622020 SPANXA2-OT1Q8N9U9 137 aa9.55□□□□□ -0.88
NPHP4-211ENST00000622020 Q96NJ1 140 aa9.53□□□□□ -0.88
NPHP4-211ENST00000622020 A0A087X002 238 aa9.53□□□□□ -0.88
NPHP4-211ENST00000622020 CD164Q04900 197 aa9.53□□□□□ -0.88
NPHP4-211ENST00000622020 NOTCH2NLQ7Z3S9 236 aa9.53□□□□□ -0.88
NPHP4-211ENST00000622020 MDFIQ99750 246 aa9.53□□□□□ -0.88
NPHP4-211ENST00000622020 SPAG11AQ6PDA7 123 aa9.53□□□□□ -0.88
NPHP4-211ENST00000622020 SPINK6Q6UWN8 80 aa9.53□□□□□ -0.88
NPHP4-211ENST00000622020 LCA10Q71F78 164 aa9.52□□□□□ -0.89
NPHP4-211ENST00000622020 NBDYA0A0U1RRE5 68 aa9.52□□□□□ -0.89
NPHP4-211ENST00000622020 A6NED7 52 aa9.52□□□□□ -0.89
NPHP4-211ENST00000622020 H3BPC8 53 aa9.52□□□□□ -0.89
NPHP4-211ENST00000622020 KRTAP13-1Q8IUC0 172 aa9.5□□□□□ -0.89
NPHP4-211ENST00000622020 LIMD2Q9BT23 127 aa9.5□□□□□ -0.89
NPHP4-211ENST00000622020 TGP01266 2768 aa9.5□□□□□ -0.89
NPHP4-211ENST00000622020 C8orf17Q9NRJ1 99 aa9.5□□□□□ -0.89
NPHP4-211ENST00000622020 IGLV7-46A0A075B6I9 117 aa9.48□□□□□ -0.89
NPHP4-211ENST00000622020 CDK2AP2O75956 126 aa9.48□□□□□ -0.89
NPHP4-211ENST00000622020 PSORS1C2Q9UIG4 136 aa9.45□□□□□ -0.9
NPHP4-211ENST00000622020 KTN1-AS1Q86SY8 53 aa9.45□□□□□ -0.9
NPHP4-211ENST00000622020 Q6ZRN7 208 aaPredicted RBP9.45□□□□□ -0.9
NPHP4-211ENST00000622020 SPACA4Q8TDM5 124 aa9.44□□□□□ -0.9
NPHP4-211ENST00000622020 RBM12B-AS1Q9P1G2 102 aa9.43□□□□□ -0.9
NPHP4-211ENST00000622020 A0A1B0GVX0 72 aa9.43□□□□□ -0.9
NPHP4-211ENST00000622020 WWC2-AS2Q96NR7 200 aa9.42□□□□□ -0.9
NPHP4-211ENST00000622020 Q75L30 129 aa9.41□□□□□ -0.9
NPHP4-211ENST00000622020 STARD9Q9P2P6 4700 aa9.4□□□□□ -0.9
NPHP4-211ENST00000622020 KMT2AQ03164 3969 aa9.4□□□□□ -0.9
NPHP4-211ENST00000622020 TP53AIP1Q9HCN2 124 aa9.4□□□□□ -0.9
NPHP4-211ENST00000622020 MRPL34Q9BQ48 92 aaKnown RBP9.39□□□□□ -0.91
NPHP4-211ENST00000622020 DNAH8Q96JB1 4490 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms