RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 ACYP1P07311 99 aa6.47□□□□□ -1.37
VPS11-208ENST00000621676 UBL5Q9BZL1 73 aa6.47□□□□□ -1.37
VPS11-208ENST00000621676 DHRS4-AS1Q9P1J3 65 aa6.47□□□□□ -1.37
VPS11-208ENST00000621676 BPY2O14599 106 aa6.47□□□□□ -1.37
VPS11-208ENST00000621676 MOBPQ13875 183 aa6.47□□□□□ -1.37
VPS11-208ENST00000621676 Q6ZQT0 140 aa6.47□□□□□ -1.37
VPS11-208ENST00000621676 FAT2Q9NYQ8 4349 aa6.46□□□□□ -1.37
VPS11-208ENST00000621676 NREPQ16612 68 aa6.46□□□□□ -1.38
VPS11-208ENST00000621676 DNAH5Q8TE73 4624 aa6.46□□□□□ -1.38
VPS11-208ENST00000621676 IMUPQ9GZP8 106 aa6.46□□□□□ -1.38
VPS11-208ENST00000621676 LINC00474Q9P2X8 69 aa6.46□□□□□ -1.38
VPS11-208ENST00000621676 LINC01547P58512 204 aaPredicted RBP6.45□□□□□ -1.38
VPS11-208ENST00000621676 LINC00643Q86TS7 51 aa6.45□□□□□ -1.38
VPS11-208ENST00000621676 RYR3Q15413 4870 aa6.45□□□□□ -1.38
VPS11-208ENST00000621676 A0A1W2PNM2 257 aa6.44□□□□□ -1.38
VPS11-208ENST00000621676 Q6ZVQ6 151 aa6.44□□□□□ -1.38
VPS11-208ENST00000621676 F8WDY8 70 aa6.43□□□□□ -1.38
VPS11-208ENST00000621676 BCE1O60756 84 aa6.43□□□□□ -1.38
VPS11-208ENST00000621676 SPRR1AP35321 89 aa6.43□□□□□ -1.38
VPS11-208ENST00000621676 IGFL1Q6UW32 110 aa6.43□□□□□ -1.38
VPS11-208ENST00000621676 SMIM29Q86T20 159 aa6.42□□□□□ -1.38
VPS11-208ENST00000621676 A0A1B0GX51 115 aa6.41□□□□□ -1.38
VPS11-208ENST00000621676 UQCRQO14949 82 aa6.41□□□□□ -1.38
VPS11-208ENST00000621676 PLA2G2DQ9UNK4 145 aa6.41□□□□□ -1.38
VPS11-208ENST00000621676 Q6JHZ5 121 aa6.4□□□□□ -1.38
VPS11-208ENST00000621676 KIAA1109Q2LD37 5005 aa6.4□□□□□ -1.38
VPS11-208ENST00000621676 LCE6AA0A183 80 aa6.4□□□□□ -1.38
VPS11-208ENST00000621676 IGLV5-37A0A075B6J1 123 aa6.4□□□□□ -1.39
VPS11-208ENST00000621676 WFDC13Q8IUB5 93 aa6.4□□□□□ -1.39
VPS11-208ENST00000621676 H0Y9J4 135 aa6.38□□□□□ -1.39
VPS11-208ENST00000621676 TRBV7-4A0A0J9YYF1 115 aa6.38□□□□□ -1.39
VPS11-208ENST00000621676 COX7CP15954 63 aa6.38□□□□□ -1.39
VPS11-208ENST00000621676 OBSCN-AS1Q96MR7 158 aa6.38□□□□□ -1.39
VPS11-208ENST00000621676 VPS13BQ7Z7G8 4022 aa6.37□□□□□ -1.39
VPS11-208ENST00000621676 ZNF861PO60384 105 aa6.37□□□□□ -1.39
VPS11-208ENST00000621676 IGLV7-43P04211 117 aa6.36□□□□□ -1.39
VPS11-208ENST00000621676 CYSTM1Q9H1C7 97 aa6.36□□□□□ -1.39
VPS11-208ENST00000621676 PLAC8Q9NZF1 115 aa6.36□□□□□ -1.39
VPS11-208ENST00000621676 DYNC1H1Q14204 4646 aaKnown RBP6.36□□□□□ -1.39
VPS11-208ENST00000621676 A0A087X002 238 aa6.36□□□□□ -1.39
VPS11-208ENST00000621676 TRBV7-6A0A0J9YX20 115 aa6.35□□□□□ -1.39
VPS11-208ENST00000621676 GHRHP01286 108 aa6.34□□□□□ -1.39
VPS11-208ENST00000621676 RETNLBQ9BQ08 111 aa6.34□□□□□ -1.39
VPS11-208ENST00000621676 ATOX1O00244 68 aa6.34□□□□□ -1.39
VPS11-208ENST00000621676 PLA2G1BP04054 148 aaKnown RBP6.34□□□□□ -1.39
VPS11-208ENST00000621676 CRYGAP11844 174 aa6.34□□□□□ -1.39
VPS11-208ENST00000621676 SPRR4Q96PI1 79 aa6.33□□□□□ -1.4
VPS11-208ENST00000621676 K7EQZ3 153 aa6.33□□□□□ -1.4
VPS11-208ENST00000621676 RYR2Q92736 4967 aa6.32□□□□□ -1.4
VPS11-208ENST00000621676 Q8NBF4 154 aa6.32□□□□□ -1.4
VPS11-208ENST00000621676 C4orf48Q5BLP8 95 aa6.32□□□□□ -1.4
VPS11-208ENST00000621676 PRR26Q8N8Z3 221 aa6.32□□□□□ -1.4
VPS11-208ENST00000621676 J3KT08 172 aa6.32□□□□□ -1.4
VPS11-208ENST00000621676 IGLV5-48A0A075B6I7 105 aa6.31□□□□□ -1.4
VPS11-208ENST00000621676 SNURFQ9Y675 71 aa6.31□□□□□ -1.4
VPS11-208ENST00000621676 LRP1Q07954 4544 aaKnown RBP6.31□□□□□ -1.4
VPS11-208ENST00000621676 EPPK1P58107 5090 aaKnown RBP6.31□□□□□ -1.4
VPS11-208ENST00000621676 LOC110117498A0A087WWA1 95 aa6.3□□□□□ -1.4
VPS11-208ENST00000621676 IGKV4-1P06312 121 aa6.3□□□□□ -1.4
VPS11-208ENST00000621676 PKD1P98161 4303 aa6.29□□□□□ -1.4
VPS11-208ENST00000621676 IGHV6-1A0A0B4J1U7 121 aa6.29□□□□□ -1.4
VPS11-208ENST00000621676 NDUFS5O43920 106 aa6.29□□□□□ -1.4
VPS11-208ENST00000621676 SERP2Q8N6R1 65 aa6.29□□□□□ -1.4
VPS11-208ENST00000621676 MYCBP2O75592 4640 aa6.29□□□□□ -1.4
VPS11-208ENST00000621676 APOBP04114 4563 aaKnown RBP6.29□□□□□ -1.4
VPS11-208ENST00000621676 RPS28P62857 69 aaKnown RBP6.27□□□□□ -1.41
VPS11-208ENST00000621676 PRR4Q16378 134 aa6.27□□□□□ -1.41
VPS11-208ENST00000621676 KRTAP13-1Q8IUC0 172 aa6.27□□□□□ -1.41
VPS11-208ENST00000621676 C20orf197Q8N268 126 aa6.27□□□□□ -1.41
VPS11-208ENST00000621676 PDE6GP18545 87 aa6.25□□□□□ -1.41
VPS11-208ENST00000621676 FAT3Q8TDW7 4589 aa6.25□□□□□ -1.41
VPS11-208ENST00000621676 PKIGQ9Y2B9 76 aa6.25□□□□□ -1.41
VPS11-208ENST00000621676 OXTP01178 125 aa6.25□□□□□ -1.41
VPS11-208ENST00000621676 TMEM258P61165 79 aa6.25□□□□□ -1.41
VPS11-208ENST00000621676 C5orf47Q569G3 176 aa6.25□□□□□ -1.41
VPS11-208ENST00000621676 NOTCH2NLQ7Z3S9 236 aa6.24□□□□□ -1.41
VPS11-208ENST00000621676 DSCR10P59022 87 aa6.23□□□□□ -1.41
VPS11-208ENST00000621676 TYMSOSQ8TAI1 123 aa6.22□□□□□ -1.41
VPS11-208ENST00000621676 KRTAP13-2Q52LG2 175 aa6.22□□□□□ -1.41
VPS11-208ENST00000621676 ALMS1Q8TCU4 4167 aa6.21□□□□□ -1.42
VPS11-208ENST00000621676 CDK2AP2O75956 126 aa6.21□□□□□ -1.42
VPS11-208ENST00000621676 C4orf26Q17RF5 130 aa6.2□□□□□ -1.42
VPS11-208ENST00000621676 Q6ZSA8 131 aa6.2□□□□□ -1.42
VPS11-208ENST00000621676 ZNF706Q9Y5V0 76 aaPredicted RBP6.19□□□□□ -1.42
VPS11-208ENST00000621676 RYR1P21817 5038 aa6.19□□□□□ -1.42
VPS11-208ENST00000621676 H3BQ85 93 aa6.18□□□□□ -1.42
VPS11-208ENST00000621676 LINC00336Q6ZUF6 198 aa6.18□□□□□ -1.42
VPS11-208ENST00000621676 C9orf92A6NGG3 77 aa6.17□□□□□ -1.42
VPS11-208ENST00000621676 ATP5EP2Q5VTU8 51 aa6.17□□□□□ -1.42
VPS11-208ENST00000621676 KRTAP17-1Q9BYP8 105 aa6.17□□□□□ -1.42
VPS11-208ENST00000621676 Q5XG85 94 aa6.17□□□□□ -1.42
VPS11-208ENST00000621676 A0A1B0GVY2 172 aa6.16□□□□□ -1.42
VPS11-208ENST00000621676 SEC61GP60059 68 aa6.16□□□□□ -1.42
VPS11-208ENST00000621676 Q5VSD8 79 aa6.15□□□□□ -1.43
VPS11-208ENST00000621676 NDUFB1O75438 58 aa6.13□□□□□ -1.43
VPS11-208ENST00000621676 KRTAP1-4P0C5Y4 121 aa6.13□□□□□ -1.43
VPS11-208ENST00000621676 CASC2Q6XLA1 102 aa6.13□□□□□ -1.43
VPS11-208ENST00000621676 FAM229AH3BQW9 127 aa6.12□□□□□ -1.43
VPS11-208ENST00000621676 CXCL6P80162 114 aa6.12□□□□□ -1.43
VPS11-208ENST00000621676 SPRR1BP22528 89 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms