RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 H3BQ85 93 aa9.72□□□□□ -0.85
CD40-207ENST00000620709 OCIAD2Q56VL3 154 aa9.72□□□□□ -0.85
CD40-207ENST00000620709 Q9BRP9 147 aa9.72□□□□□ -0.85
CD40-207ENST00000620709 H0Y9J4 135 aa9.72□□□□□ -0.85
CD40-207ENST00000620709 GHRHP01286 108 aa9.72□□□□□ -0.85
CD40-207ENST00000620709 TMEM256-PLSCR3K7ERE1 68 aa9.71□□□□□ -0.86
CD40-207ENST00000620709 BCE1O60756 84 aa9.71□□□□□ -0.86
CD40-207ENST00000620709 RNF213Q63HN8 5207 aa9.69□□□□□ -0.86
CD40-207ENST00000620709 UBE2AP49459 152 aa9.69□□□□□ -0.86
CD40-207ENST00000620709 PRLHP81277 87 aa9.69□□□□□ -0.86
CD40-207ENST00000620709 SMCR5Q8TEV8 140 aa9.67□□□□□ -0.86
CD40-207ENST00000620709 PPDPFLQ8WWR9 84 aa9.67□□□□□ -0.86
CD40-207ENST00000620709 HIGD2AQ9BW72 106 aa9.66□□□□□ -0.86
CD40-207ENST00000620709 LPAP08519 4548 aa9.65□□□□□ -0.86
CD40-207ENST00000620709 TEX49A0A1B0GTD5 131 aa9.64□□□□□ -0.87
CD40-207ENST00000620709 ERC2-IT1O76042 136 aa9.64□□□□□ -0.87
CD40-207ENST00000620709 KRTAP13-1Q8IUC0 172 aa9.63□□□□□ -0.87
CD40-207ENST00000620709 IGLV5-48A0A075B6I7 105 aa9.61□□□□□ -0.87
CD40-207ENST00000620709 J3QR89 54 aa9.61□□□□□ -0.87
CD40-207ENST00000620709 KRTAP1-4P0C5Y4 121 aa9.61□□□□□ -0.87
CD40-207ENST00000620709 LAMTOR3Q9UHA4 124 aa9.61□□□□□ -0.87
CD40-207ENST00000620709 JMJD7-PLA2G4BH0Y9G9 81 aa9.61□□□□□ -0.87
CD40-207ENST00000620709 K7ERU9 68 aa9.61□□□□□ -0.87
CD40-207ENST00000620709 LINC01547P58512 204 aaPredicted RBP9.61□□□□□ -0.87
CD40-207ENST00000620709 ST20-AS1Q8NBB2 130 aa9.61□□□□□ -0.87
CD40-207ENST00000620709 DEFB105AQ8NG35 78 aa9.61□□□□□ -0.87
CD40-207ENST00000620709 OBSCN-AS1Q96MR7 158 aa9.61□□□□□ -0.87
CD40-207ENST00000620709 ZNF861PO60384 105 aa9.6□□□□□ -0.87
CD40-207ENST00000620709 Q8N377 158 aa9.59□□□□□ -0.87
CD40-207ENST00000620709 NDUFV3P56181 108 aaKnown RBP9.57□□□□□ -0.88
CD40-207ENST00000620709 A0A1B0GV72 72 aa9.56□□□□□ -0.88
CD40-207ENST00000620709 PRR4Q16378 134 aa9.56□□□□□ -0.88
CD40-207ENST00000620709 C14orf132Q9NPU4 83 aa9.56□□□□□ -0.88
CD40-207ENST00000620709 RBM3P98179 157 aaKnown RBP9.55□□□□□ -0.88
CD40-207ENST00000620709 ZNF706Q9Y5V0 76 aaPredicted RBP9.52□□□□□ -0.88
CD40-207ENST00000620709 SPRR1BP22528 89 aa9.51□□□□□ -0.89
CD40-207ENST00000620709 DSCR8Q96T75 97 aa9.51□□□□□ -0.89
CD40-207ENST00000620709 GAGE2AQ6NT46 116 aa9.51□□□□□ -0.89
CD40-207ENST00000620709 C3orf22Q8N5N4 141 aa9.51□□□□□ -0.89
CD40-207ENST00000620709 LOC110117498A0A087WWA1 95 aa9.49□□□□□ -0.89
CD40-207ENST00000620709 F8WEM9 126 aa9.49□□□□□ -0.89
CD40-207ENST00000620709 PDE6GP18545 87 aa9.49□□□□□ -0.89
CD40-207ENST00000620709 SPRR4Q96PI1 79 aa9.49□□□□□ -0.89
CD40-207ENST00000620709 A0A087X002 238 aa9.48□□□□□ -0.89
CD40-207ENST00000620709 SMIM29Q86T20 159 aa9.48□□□□□ -0.89
CD40-207ENST00000620709 TYMSOSQ8TAI1 123 aa9.48□□□□□ -0.89
CD40-207ENST00000620709 ANAPC11Q9NYG5 84 aa9.48□□□□□ -0.89
CD40-207ENST00000620709 TRBV7-4A0A0J9YYF1 115 aa9.47□□□□□ -0.89
CD40-207ENST00000620709 FAM240AA0A1B0GVK7 77 aa9.47□□□□□ -0.89
CD40-207ENST00000620709 CRYGAP11844 174 aa9.47□□□□□ -0.89
CD40-207ENST00000620709 CCKP06307 115 aa9.46□□□□□ -0.89
CD40-207ENST00000620709 C21orf62-AS1Q17RA5 79 aa9.46□□□□□ -0.89
CD40-207ENST00000620709 Q6ZQT0 140 aa9.46□□□□□ -0.89
CD40-207ENST00000620709 LINC00483Q53H64 154 aa9.46□□□□□ -0.9
CD40-207ENST00000620709 ACYP1P07311 99 aa9.45□□□□□ -0.9
CD40-207ENST00000620709 IGLV8-61A0A075B6I0 122 aa9.42□□□□□ -0.9
CD40-207ENST00000620709 VPS25Q9BRG1 176 aa9.4□□□□□ -0.91
CD40-207ENST00000620709 KRTAP13-2Q52LG2 175 aa9.38□□□□□ -0.91
CD40-207ENST00000620709 Q6JHZ5 121 aa9.38□□□□□ -0.91
CD40-207ENST00000620709 CDIP1Q9H305 208 aa9.37□□□□□ -0.91
CD40-207ENST00000620709 IGFL1Q6UW32 110 aa9.36□□□□□ -0.91
CD40-207ENST00000620709 IGLV9-49A0A0B4J1Y8 123 aa9.36□□□□□ -0.91
CD40-207ENST00000620709 FAM229BQ4G0N7 80 aa9.36□□□□□ -0.91
CD40-207ENST00000620709 C9orf153Q5TBE3 101 aa9.36□□□□□ -0.91
CD40-207ENST00000620709 LINC00304Q8N9R0 145 aa9.36□□□□□ -0.91
CD40-207ENST00000620709 RETNLBQ9BQ08 111 aa9.36□□□□□ -0.91
CD40-207ENST00000620709 Q8NBF4 154 aa9.35□□□□□ -0.91
CD40-207ENST00000620709 A0A1W2PNM2 257 aa9.34□□□□□ -0.91
CD40-207ENST00000620709 LINC00846Q9NV44 126 aa9.34□□□□□ -0.91
CD40-207ENST00000620709 A0A1B0GW54 56 aa9.32□□□□□ -0.92
CD40-207ENST00000620709 MOBPQ13875 183 aa9.31□□□□□ -0.92
CD40-207ENST00000620709 MUC2Q02817 5179 aa9.31□□□□□ -0.92
CD40-207ENST00000620709 A0A0G2JQZ4 141 aa9.3□□□□□ -0.92
CD40-207ENST00000620709 UBL5Q9BZL1 73 aa9.3□□□□□ -0.92
CD40-207ENST00000620709 Q6Q795 121 aa9.28□□□□□ -0.92
CD40-207ENST00000620709 LINC00643Q86TS7 51 aa9.27□□□□□ -0.93
CD40-207ENST00000620709 Q6ZVQ6 151 aa9.25□□□□□ -0.93
CD40-207ENST00000620709 SSBP3-AS1Q7Z2R9 100 aa9.25□□□□□ -0.93
CD40-207ENST00000620709 IGLV7-46A0A075B6I9 117 aa9.24□□□□□ -0.93
CD40-207ENST00000620709 A0A0U1RQV1 116 aa9.24□□□□□ -0.93
CD40-207ENST00000620709 SIGMAR1Q99720 223 aa9.23□□□□□ -0.93
CD40-207ENST00000620709 TRBV7-7A0A0K0K1E9 115 aa9.22□□□□□ -0.93
CD40-207ENST00000620709 MT-ATP8P03928 68 aa9.22□□□□□ -0.93
CD40-207ENST00000620709 C4orf48Q5BLP8 95 aa9.22□□□□□ -0.93
CD40-207ENST00000620709 A0A087WSZ3 146 aa9.21□□□□□ -0.93
CD40-207ENST00000620709 NREPQ16612 68 aa9.21□□□□□ -0.93
CD40-207ENST00000620709 ATP5EP2Q5VTU8 51 aa9.21□□□□□ -0.94
CD40-207ENST00000620709 SPAG11AQ6PDA7 123 aa9.19□□□□□ -0.94
CD40-207ENST00000620709 MUC17Q685J3 4493 aa9.18□□□□□ -0.94
CD40-207ENST00000620709 CD164Q04900 197 aa9.18□□□□□ -0.94
CD40-207ENST00000620709 TPRXLQ17RH7 258 aa9.17□□□□□ -0.94
CD40-207ENST00000620709 HRCT1Q6UXD1 115 aa9.17□□□□□ -0.94
CD40-207ENST00000620709 IGKV3D-7A0A0C4DH55 119 aa9.15□□□□□ -0.94
CD40-207ENST00000620709 SS18L2Q9UHA2 77 aa9.15□□□□□ -0.95
CD40-207ENST00000620709 CXCL6P80162 114 aa9.14□□□□□ -0.95
CD40-207ENST00000620709 FAT4Q6V0I7 4981 aa9.14□□□□□ -0.95
CD40-207ENST00000620709 BPY2O14599 106 aa9.13□□□□□ -0.95
CD40-207ENST00000620709 IMUPQ9GZP8 106 aa9.12□□□□□ -0.95
CD40-207ENST00000620709 FP248Q71RG6 208 aaPredicted RBP9.09□□□□□ -0.95
CD40-207ENST00000620709 SPINK1P00995 79 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms