RNA–Protein interactions for RNA: ENST00000620507.4

RBFOX1-223, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-223ENST00000620507 RBM12B-AS1Q9P1G2 102 aa5.91□□□□□ -1.46
RBFOX1-223ENST00000620507 IGLV5-48A0A075B6I7 105 aa5.91□□□□□ -1.46
RBFOX1-223ENST00000620507 A0A1W2PNN7 141 aa5.9□□□□□ -1.46
RBFOX1-223ENST00000620507 LY6G6CO95867 125 aa5.9□□□□□ -1.47
RBFOX1-223ENST00000620507 A0A1W2PNM2 257 aa5.9□□□□□ -1.47
RBFOX1-223ENST00000620507 APLNQ9ULZ1 77 aa5.9□□□□□ -1.47
RBFOX1-223ENST00000620507 ZNF706Q9Y5V0 76 aaPredicted RBP5.9□□□□□ -1.47
RBFOX1-223ENST00000620507 HCG22E2RYF7 251 aa5.89□□□□□ -1.47
RBFOX1-223ENST00000620507 H7BZZ5 65 aa5.89□□□□□ -1.47
RBFOX1-223ENST00000620507 CNBPP62633 177 aaKnown RBP5.89□□□□□ -1.47
RBFOX1-223ENST00000620507 FP248Q71RG6 208 aaPredicted RBP5.89□□□□□ -1.47
RBFOX1-223ENST00000620507 TENM3Q9P273 2699 aa5.89□□□□□ -1.47
RBFOX1-223ENST00000620507 STAB2Q8WWQ8 2551 aa5.88□□□□□ -1.47
RBFOX1-223ENST00000620507 ZNF469Q96JG9 3925 aaPredicted RBP5.88□□□□□ -1.47
RBFOX1-223ENST00000620507 IGKV4-1P06312 121 aa5.88□□□□□ -1.47
RBFOX1-223ENST00000620507 A0A0G2JQZ4 141 aa5.88□□□□□ -1.47
RBFOX1-223ENST00000620507 C9orf163Q8N9P6 203 aa5.88□□□□□ -1.47
RBFOX1-223ENST00000620507 PRR15LQ9BU68 103 aa5.87□□□□□ -1.47
RBFOX1-223ENST00000620507 IGFL1Q6UW32 110 aa5.87□□□□□ -1.47
RBFOX1-223ENST00000620507 SPRR1AP35321 89 aa5.87□□□□□ -1.47
RBFOX1-223ENST00000620507 KTN1-AS1Q86SY8 53 aa5.87□□□□□ -1.47
RBFOX1-223ENST00000620507 IGLV5-52A0A0A0MRZ9 124 aa5.86□□□□□ -1.47
RBFOX1-223ENST00000620507 KLKP1Q107X0 134 aa5.86□□□□□ -1.47
RBFOX1-223ENST00000620507 CASC2Q6XLA1 102 aa5.86□□□□□ -1.47
RBFOX1-223ENST00000620507 K7EQZ3 153 aa5.86□□□□□ -1.47
RBFOX1-223ENST00000620507 C1orf134Q5TEV5 83 aa5.85□□□□□ -1.47
RBFOX1-223ENST00000620507 LINC00208Q96KT6 92 aa5.85□□□□□ -1.47
RBFOX1-223ENST00000620507 KRTAP1-5Q9BYS1 174 aa5.85□□□□□ -1.47
RBFOX1-223ENST00000620507 PRR15Q8IV56 129 aa5.84□□□□□ -1.47
RBFOX1-223ENST00000620507 A8MUN3 132 aa5.83□□□□□ -1.48
RBFOX1-223ENST00000620507 SPINK6Q6UWN8 80 aa5.83□□□□□ -1.48
RBFOX1-223ENST00000620507 RPL37AP61513 92 aaKnown RBP5.82□□□□□ -1.48
RBFOX1-223ENST00000620507 ANK3Q12955 4377 aaKnown RBP5.82□□□□□ -1.48
RBFOX1-223ENST00000620507 FBN1P35555 2871 aaKnown RBP5.82□□□□□ -1.48
RBFOX1-223ENST00000620507 RTL8CO15255 209 aa5.82□□□□□ -1.48
RBFOX1-223ENST00000620507 SPRR4Q96PI1 79 aa5.81□□□□□ -1.48
RBFOX1-223ENST00000620507 KRTAP4-16G5E9R7 235 aaPredicted RBP5.81□□□□□ -1.48
RBFOX1-223ENST00000620507 A0A087WTM6 91 aa5.79□□□□□ -1.48
RBFOX1-223ENST00000620507 IGHV6-1A0A0B4J1U7 121 aa5.79□□□□□ -1.48
RBFOX1-223ENST00000620507 H0Y9P7 68 aa5.79□□□□□ -1.48
RBFOX1-223ENST00000620507 PKD1L1Q8TDX9 2849 aa5.79□□□□□ -1.48
RBFOX1-223ENST00000620507 MOBPQ13875 183 aa5.79□□□□□ -1.48
RBFOX1-223ENST00000620507 LCA10Q71F78 164 aa5.79□□□□□ -1.48
RBFOX1-223ENST00000620507 CIRBP-AS1Q8TBR5 109 aa5.78□□□□□ -1.48
RBFOX1-223ENST00000620507 OCR1Q9BZK8 76 aa5.78□□□□□ -1.48
RBFOX1-223ENST00000620507 DSCR10P59022 87 aa5.77□□□□□ -1.49
RBFOX1-223ENST00000620507 TRRAPQ9Y4A5 3859 aa5.76□□□□□ -1.49
RBFOX1-223ENST00000620507 A8MWP4 228 aa5.76□□□□□ -1.49
RBFOX1-223ENST00000620507 TNP2Q05952 138 aa5.76□□□□□ -1.49
RBFOX1-223ENST00000620507 FAM229BQ4G0N7 80 aa5.76□□□□□ -1.49
RBFOX1-223ENST00000620507 KRTAP7-1Q8IUC3 87 aa5.76□□□□□ -1.49
RBFOX1-223ENST00000620507 TRAV22A0A0B4J277 110 aa5.75□□□□□ -1.49
RBFOX1-223ENST00000620507 hDV103S1A0JD37 113 aa5.75□□□□□ -1.49
RBFOX1-223ENST00000620507 C8orf87E5RJ46 101 aa5.74□□□□□ -1.49
RBFOX1-223ENST00000620507 C1orf64Q8NEQ6 169 aa5.74□□□□□ -1.49
RBFOX1-223ENST00000620507 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.74□□□□□ -1.49
RBFOX1-223ENST00000620507 C7orf65Q6ZTY9 151 aa5.73□□□□□ -1.49
RBFOX1-223ENST00000620507 RETNLBQ9BQ08 111 aa5.73□□□□□ -1.49
RBFOX1-223ENST00000620507 PSORS1C2Q9UIG4 136 aa5.72□□□□□ -1.49
RBFOX1-223ENST00000620507 ZNF861PO60384 105 aa5.72□□□□□ -1.49
RBFOX1-223ENST00000620507 PCOTHQ58A44 107 aa5.72□□□□□ -1.49
RBFOX1-223ENST00000620507 LIMD2Q9BT23 127 aa5.71□□□□□ -1.5
RBFOX1-223ENST00000620507 ANAPC11Q9NYG5 84 aa5.71□□□□□ -1.5
RBFOX1-223ENST00000620507 AKAP9Q99996 3911 aa5.71□□□□□ -1.5
RBFOX1-223ENST00000620507 ATP11AUNQ6ZP68 121 aa5.71□□□□□ -1.5
RBFOX1-223ENST00000620507 IGLV8-61A0A075B6I0 122 aa5.7□□□□□ -1.5
RBFOX1-223ENST00000620507 SPACA4Q8TDM5 124 aa5.7□□□□□ -1.5
RBFOX1-223ENST00000620507 H3BPC8 53 aa5.7□□□□□ -1.5
RBFOX1-223ENST00000620507 TP53AIP1Q9HCN2 124 aa5.7□□□□□ -1.5
RBFOX1-223ENST00000620507 PRR26Q8N8Z3 221 aa5.69□□□□□ -1.5
RBFOX1-223ENST00000620507 SPRR1BP22528 89 aa5.69□□□□□ -1.5
RBFOX1-223ENST00000620507 PANO1I0J062 215 aa5.67□□□□□ -1.5
RBFOX1-223ENST00000620507 KRTAP11-1Q8IUC1 163 aa5.66□□□□□ -1.5
RBFOX1-223ENST00000620507 A0A0A0MQY5 61 aa5.65□□□□□ -1.5
RBFOX1-223ENST00000620507 WWC2-AS2Q96NR7 200 aa5.65□□□□□ -1.5
RBFOX1-223ENST00000620507 C8orf17Q9NRJ1 99 aa5.65□□□□□ -1.51
RBFOX1-223ENST00000620507 IGLV7-43P04211 117 aa5.64□□□□□ -1.51
RBFOX1-223ENST00000620507 LINC01554Q52M75 96 aa5.64□□□□□ -1.51
RBFOX1-223ENST00000620507 A0A1B0GVX0 72 aa5.64□□□□□ -1.51
RBFOX1-223ENST00000620507 LINC00472Q9H8W2 130 aa5.63□□□□□ -1.51
RBFOX1-223ENST00000620507 MRPL34Q9BQ48 92 aaKnown RBP5.63□□□□□ -1.51
RBFOX1-223ENST00000620507 Q1T7F1 81 aa5.63□□□□□ -1.51
RBFOX1-223ENST00000620507 Q6ZRN7 208 aaPredicted RBP5.63□□□□□ -1.51
RBFOX1-223ENST00000620507 PRAC1Q96KF2 57 aa5.63□□□□□ -1.51
RBFOX1-223ENST00000620507 PLAC8Q9NZF1 115 aa5.62□□□□□ -1.51
RBFOX1-223ENST00000620507 SSBP3-AS1Q7Z2R9 100 aa5.61□□□□□ -1.51
RBFOX1-223ENST00000620507 SPAG11AQ6PDA7 123 aa5.61□□□□□ -1.51
RBFOX1-223ENST00000620507 TENM2Q9NT68 2774 aa5.6□□□□□ -1.51
RBFOX1-223ENST00000620507 CYP4F30PQ9H0H9 118 aa5.59□□□□□ -1.51
RBFOX1-223ENST00000620507 MMP24-AS1A0A0U1RRL7 71 aa5.58□□□□□ -1.52
RBFOX1-223ENST00000620507 LINC00313P59037 77 aa5.58□□□□□ -1.52
RBFOX1-223ENST00000620507 Q6ZR54 194 aa5.58□□□□□ -1.52
RBFOX1-223ENST00000620507 A8MU10 97 aa5.56□□□□□ -1.52
RBFOX1-223ENST00000620507 SPANXA2-OT1Q8N9U9 137 aa5.56□□□□□ -1.52
RBFOX1-223ENST00000620507 LOC101927531A0A1B0GV80 90 aa5.55□□□□□ -1.52
RBFOX1-223ENST00000620507 PLA2G1BP04054 148 aaKnown RBP5.55□□□□□ -1.52
RBFOX1-223ENST00000620507 KRTAP29-1A8MX34 341 aaPredicted RBP5.55□□□□□ -1.52
RBFOX1-223ENST00000620507 LINC00483Q53H64 154 aa5.55□□□□□ -1.52
RBFOX1-223ENST00000620507 TYMSOSQ8TAI1 123 aa5.55□□□□□ -1.52
RBFOX1-223ENST00000620507 KRTAP13-1Q8IUC0 172 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms