RNA–Protein interactions for RNA: ENST00000619564.3

FGFR1-241, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 5 BASIC

Gene FGFR1, Length 5,482 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-241ENST00000619564 LINC00472Q9H8W2 130 aa12.24□□□□□ -0.45
FGFR1-241ENST00000619564 SPINK7P58062 85 aa12.23□□□□□ -0.45
FGFR1-241ENST00000619564 KRTAP10-1P60331 282 aa12.22□□□□□ -0.45
FGFR1-241ENST00000619564 DMAC1Q96GE9 116 aa12.2□□□□□ -0.46
FGFR1-241ENST00000619564 Q75L30 129 aa12.18□□□□□ -0.46
FGFR1-241ENST00000619564 CYSTM1Q9H1C7 97 aa12.18□□□□□ -0.46
FGFR1-241ENST00000619564 KRTAP26-1Q6PEX3 210 aa12.18□□□□□ -0.46
FGFR1-241ENST00000619564 KRTAP10-2P60368 255 aa12.17□□□□□ -0.46
FGFR1-241ENST00000619564 Q5XG85 94 aa12.17□□□□□ -0.46
FGFR1-241ENST00000619564 LINC01558Q9Y6Z2 57 aa12.15□□□□□ -0.46
FGFR1-241ENST00000619564 CENPEQ02224 2701 aa12.14□□□□□ -0.47
FGFR1-241ENST00000619564 R4GN34 69 aa12.13□□□□□ -0.47
FGFR1-241ENST00000619564 C5orf42Q9H799 3197 aa12.09□□□□□ -0.47
FGFR1-241ENST00000619564 CHD7Q9P2D1 2997 aa12.04□□□□□ -0.48
FGFR1-241ENST00000619564 FP248Q71RG6 208 aaPredicted RBP12.04□□□□□ -0.48
FGFR1-241ENST00000619564 TEX15Q9BXT5 2789 aa12.03□□□□□ -0.48
FGFR1-241ENST00000619564 TEP1Q99973 2627 aaKnown RBP12.03□□□□□ -0.48
FGFR1-241ENST00000619564 HTTP42858 3142 aa12.01□□□□□ -0.49
FGFR1-241ENST00000619564 AKAP13Q12802 2813 aa12□□□□□ -0.49
FGFR1-241ENST00000619564 SETXQ7Z333 2677 aaKnown RBP12□□□□□ -0.49
FGFR1-241ENST00000619564 Q6ZR54 194 aa11.97□□□□□ -0.49
FGFR1-241ENST00000619564 CHD6Q8TD26 2715 aa11.97□□□□□ -0.49
FGFR1-241ENST00000619564 OXTP01178 125 aa11.96□□□□□ -0.5
FGFR1-241ENST00000619564 NBEAL1Q6ZS30 2694 aa11.95□□□□□ -0.5
FGFR1-241ENST00000619564 A0A0C4DFX4 3053 aa11.95□□□□□ -0.5
FGFR1-241ENST00000619564 PANO1I0J062 215 aa11.93□□□□□ -0.5
FGFR1-241ENST00000619564 COL6A5A8TX70 2615 aa11.92□□□□□ -0.5
FGFR1-241ENST00000619564 FLG2Q5D862 2391 aaPredicted RBP11.88□□□□□ -0.51
FGFR1-241ENST00000619564 M0QZ58 72 aa11.88□□□□□ -0.51
FGFR1-241ENST00000619564 KRTAP4-16G5E9R7 235 aaPredicted RBP11.87□□□□□ -0.51
FGFR1-241ENST00000619564 RANBP2P49792 3224 aaKnown RBP11.86□□□□□ -0.51
FGFR1-241ENST00000619564 MKI67P46013 3256 aaKnown RBP11.86□□□□□ -0.51
FGFR1-241ENST00000619564 Q5VV11 94 aa11.86□□□□□ -0.51
FGFR1-241ENST00000619564 RPL37P61927 97 aaKnown RBP11.85□□□□□ -0.51
FGFR1-241ENST00000619564 CHD9Q3L8U1 2897 aa11.85□□□□□ -0.51
FGFR1-241ENST00000619564 PRAC1Q96KF2 57 aa11.83□□□□□ -0.51
FGFR1-241ENST00000619564 A0A087X002 238 aa11.82□□□□□ -0.52
FGFR1-241ENST00000619564 ZNF292O60281 2723 aa11.81□□□□□ -0.52
FGFR1-241ENST00000619564 UNC79Q9P2D8 2635 aa11.81□□□□□ -0.52
FGFR1-241ENST00000619564 LAMA3Q16787 3333 aa11.78□□□□□ -0.52
FGFR1-241ENST00000619564 H1FX-AS1Q4G0G2 97 aa11.78□□□□□ -0.52
FGFR1-241ENST00000619564 BRCA2P51587 3418 aa11.78□□□□□ -0.52
FGFR1-241ENST00000619564 MGAQ8IWI9 3026 aa11.76□□□□□ -0.53
FGFR1-241ENST00000619564 PLAC4Q8WY50 150 aa11.76□□□□□ -0.53
FGFR1-241ENST00000619564 ADM2Q7Z4H4 148 aa11.73□□□□□ -0.53
FGFR1-241ENST00000619564 NOTCH1P46531 2555 aa11.73□□□□□ -0.53
FGFR1-241ENST00000619564 GCN1Q92616 2671 aaKnown RBP11.73□□□□□ -0.53
FGFR1-241ENST00000619564 ROMO1P60602 79 aa11.73□□□□□ -0.53
FGFR1-241ENST00000619564 BAHCC1Q9P281 2608 aa11.71□□□□□ -0.53
FGFR1-241ENST00000619564 H3BS24 57 aa11.71□□□□□ -0.53
FGFR1-241ENST00000619564 CFAP54Q96N23 3096 aa11.71□□□□□ -0.53
FGFR1-241ENST00000619564 KRTAP29-1A8MX34 341 aaPredicted RBP11.69□□□□□ -0.54
FGFR1-241ENST00000619564 RPS29P62273 56 aaKnown RBP11.66□□□□□ -0.54
FGFR1-241ENST00000619564 Q6ZRN7 208 aaPredicted RBP11.65□□□□□ -0.54
FGFR1-241ENST00000619564 ASB16-AS1Q495Z4 193 aa11.63□□□□□ -0.55
FGFR1-241ENST00000619564 DMBT1Q9UGM3 2413 aaPredicted RBP11.61□□□□□ -0.55
FGFR1-241ENST00000619564 A0A0A0MQY5 61 aa11.59□□□□□ -0.55
FGFR1-241ENST00000619564 IGSF10Q6WRI0 2623 aa11.59□□□□□ -0.55
FGFR1-241ENST00000619564 SPATA8Q6RVD6 105 aa11.59□□□□□ -0.55
FGFR1-241ENST00000619564 NOTCH2NLQ7Z3S9 236 aa11.57□□□□□ -0.56
FGFR1-241ENST00000619564 KRTAP11-1Q8IUC1 163 aa11.57□□□□□ -0.56
FGFR1-241ENST00000619564 TRANK1O15050 2925 aa11.55□□□□□ -0.56
FGFR1-241ENST00000619564 UNC80Q8N2C7 3258 aa11.5□□□□□ -0.57
FGFR1-241ENST00000619564 PRUNE2Q8WUY3 3088 aa11.49□□□□□ -0.57
FGFR1-241ENST00000619564 UBR5O95071 2799 aaPredicted RBP11.48□□□□□ -0.57
FGFR1-241ENST00000619564 DSPP15924 2871 aaKnown RBP11.47□□□□□ -0.57
FGFR1-241ENST00000619564 NBEAL2Q6ZNJ1 2754 aa11.47□□□□□ -0.57
FGFR1-241ENST00000619564 STAB2Q8WWQ8 2551 aa11.46□□□□□ -0.58
FGFR1-241ENST00000619564 LAMA2P24043 3122 aaKnown RBP11.45□□□□□ -0.58
FGFR1-241ENST00000619564 KRTAP13-2Q52LG2 175 aa11.44□□□□□ -0.58
FGFR1-241ENST00000619564 KRTAP7-1Q8IUC3 87 aa11.44□□□□□ -0.58
FGFR1-241ENST00000619564 KRTAP21-3Q3LHN1 58 aa11.44□□□□□ -0.58
FGFR1-241ENST00000619564 NSD1Q96L73 2696 aaPredicted RBP11.43□□□□□ -0.58
FGFR1-241ENST00000619564 CDH23Q9H251 3354 aa11.41□□□□□ -0.58
FGFR1-241ENST00000619564 ITPR2Q14571 2701 aa11.4□□□□□ -0.58
FGFR1-241ENST00000619564 A8MUU9 505 aa11.39□□□□□ -0.59
FGFR1-241ENST00000619564 WDFY4Q6ZS81 3184 aa11.38□□□□□ -0.59
FGFR1-241ENST00000619564 KRTAP13-1Q8IUC0 172 aa11.38□□□□□ -0.59
FGFR1-241ENST00000619564 MAP1AP78559 2803 aaPredicted RBP11.37□□□□□ -0.59
FGFR1-241ENST00000619564 C20orf166-AS1Q96NR2 134 aa11.32□□□□□ -0.6
FGFR1-241ENST00000619564 XIRP2A4UGR9 3374 aa11.31□□□□□ -0.6
FGFR1-241ENST00000619564 FRYQ5TBA9 3013 aa11.25□□□□□ -0.61
FGFR1-241ENST00000619564 TRIOO75962 3097 aa11.22□□□□□ -0.61
FGFR1-241ENST00000619564 A8MU10 97 aa11.21□□□□□ -0.61
FGFR1-241ENST00000619564 FREM2Q5SZK8 3169 aa11.21□□□□□ -0.62
FGFR1-241ENST00000619564 ITPR1Q14643 2758 aa11.21□□□□□ -0.62
FGFR1-241ENST00000619564 KMT2BQ9UMN6 2715 aaPredicted RBP11.17□□□□□ -0.62
FGFR1-241ENST00000619564 SZT2Q5T011 3432 aa11.15□□□□□ -0.62
FGFR1-241ENST00000619564 A6NN06 94 aa11.12□□□□□ -0.63
FGFR1-241ENST00000619564 KRTAP25-1Q3LHN0 102 aa11.05□□□□□ -0.64
FGFR1-241ENST00000619564 VPS13AQ96RL7 3174 aa11.02□□□□□ -0.64
FGFR1-241ENST00000619564 TNP1P09430 55 aa11.02□□□□□ -0.65
FGFR1-241ENST00000619564 DNAH14Q0VDD8 3507 aa11.01□□□□□ -0.65
FGFR1-241ENST00000619564 HIVEP1P15822 2718 aa10.98□□□□□ -0.65
FGFR1-241ENST00000619564 UTP20O75691 2785 aaKnown RBP10.97□□□□□ -0.65
FGFR1-241ENST00000619564 CELSR3Q9NYQ7 3312 aa10.96□□□□□ -0.65
FGFR1-241ENST00000619564 FLNCQ14315 2725 aa10.96□□□□□ -0.65
FGFR1-241ENST00000619564 VCANP13611 3396 aa10.95□□□□□ -0.66
FGFR1-241ENST00000619564 TACC2O95359 2948 aa10.95□□□□□ -0.66
FGFR1-241ENST00000619564 TENM4Q6N022 2769 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms