RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 M0R2T5 61 aa0□□□□□ -2.41
TARDBP-220ENST00000618606 NDUFB1O75438 58 aa0□□□□□ -2.41
TARDBP-220ENST00000618606 HERC2O95714 4834 aa0□□□□□ -2.41
TARDBP-220ENST00000618606 SMIM13P0DJ93 91 aa0□□□□□ -2.41
TARDBP-220ENST00000618606 DEFA5Q01523 94 aa0□□□□□ -2.41
TARDBP-220ENST00000618606 URB2Q14146 1524 aaKnown RBP0□□□□□ -2.41
TARDBP-220ENST00000618606 ITPR3Q14573 2671 aa0□□□□□ -2.41
TARDBP-220ENST00000618606 KRTAP6-1Q3LI64 71 aa0□□□□□ -2.41
TARDBP-220ENST00000618606 DEFB121Q5J5C9 76 aa0□□□□□ -2.41
TARDBP-220ENST00000618606 BCORQ6W2J9 1755 aa0□□□□□ -2.41
TARDBP-220ENST00000618606 ZFHX4Q86UP3 3567 aa0□□□□□ -2.41
TARDBP-220ENST00000618606 SRRM2Q9UQ35 2752 aaKnown RBP0□□□□□ -2.41
TARDBP-220ENST00000618606 MYO15AQ9UKN7 3530 aa-0□□□□□ -2.41
TARDBP-220ENST00000618606 LAMA2P24043 3122 aaKnown RBP-0□□□□□ -2.41
TARDBP-220ENST00000618606 NF1P21359 2839 aa-0□□□□□ -2.41
TARDBP-220ENST00000618606 UTP20O75691 2785 aaKnown RBP-0□□□□□ -2.41
TARDBP-220ENST00000618606 TLN1Q9Y490 2541 aaKnown RBP-0.01□□□□□ -2.41
TARDBP-220ENST00000618606 DNHD1Q96M86 4753 aa-0.01□□□□□ -2.41
TARDBP-220ENST00000618606 POLR1AO95602 1720 aaPredicted RBP-0.01□□□□□ -2.41
TARDBP-220ENST00000618606 DOT1LQ8TEK3 1739 aa-0.01□□□□□ -2.41
TARDBP-220ENST00000618606 SZT2Q5T011 3432 aa-0.01□□□□□ -2.41
TARDBP-220ENST00000618606 PREX1Q8TCU6 1659 aa-0.01□□□□□ -2.41
TARDBP-220ENST00000618606 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.01□□□□□ -2.41
TARDBP-220ENST00000618606 DCAF1Q9Y4B6 1507 aa-0.01□□□□□ -2.41
TARDBP-220ENST00000618606 MAP1AP78559 2803 aaPredicted RBP-0.01□□□□□ -2.41
TARDBP-220ENST00000618606 TGP01266 2768 aa-0.01□□□□□ -2.41
TARDBP-220ENST00000618606 A0A087WXM4 84 aa-0.01□□□□□ -2.41
TARDBP-220ENST00000618606 DEFB135Q30KP9 77 aa-0.01□□□□□ -2.41
TARDBP-220ENST00000618606 KRTAP19-6Q3LI70 58 aa-0.01□□□□□ -2.41
TARDBP-220ENST00000618606 BIRC6Q9NR09 4857 aa-0.01□□□□□ -2.41
TARDBP-220ENST00000618606 SPEGQ15772 3267 aa-0.01□□□□□ -2.41
TARDBP-220ENST00000618606 LOC400499M0QZD8 3231 aa-0.01□□□□□ -2.41
TARDBP-220ENST00000618606 REV3LO60673 3130 aa-0.01□□□□□ -2.41
TARDBP-220ENST00000618606 MTORP42345 2549 aa-0.02□□□□□ -2.41
TARDBP-220ENST00000618606 PIK3C2BO00750 1634 aa-0.02□□□□□ -2.41
TARDBP-220ENST00000618606 VPS13DQ5THJ4 4388 aa-0.02□□□□□ -2.41
TARDBP-220ENST00000618606 MXRA5Q9NR99 2828 aa-0.02□□□□□ -2.41
TARDBP-220ENST00000618606 DNAH11Q96DT5 4516 aa-0.02□□□□□ -2.41
TARDBP-220ENST00000618606 H0YGG7 62 aa-0.02□□□□□ -2.41
TARDBP-220ENST00000618606 SPRR2EP22531 72 aa-0.02□□□□□ -2.41
TARDBP-220ENST00000618606 SPRR2BP35325 72 aa-0.02□□□□□ -2.41
TARDBP-220ENST00000618606 SPRR2AP35326 72 aa-0.02□□□□□ -2.41
TARDBP-220ENST00000618606 NREPQ16612 68 aa-0.02□□□□□ -2.41
TARDBP-220ENST00000618606 DSPP15924 2871 aaKnown RBP-0.03□□□□□ -2.41
TARDBP-220ENST00000618606 PRRC2CQ9Y520 2896 aaKnown RBP-0.03□□□□□ -2.41
TARDBP-220ENST00000618606 STARD9Q9P2P6 4700 aa-0.03□□□□□ -2.41
TARDBP-220ENST00000618606 LAMA1P25391 3075 aa-0.03□□□□□ -2.41
TARDBP-220ENST00000618606 CEP295Q9C0D2 2601 aa-0.03□□□□□ -2.41
TARDBP-220ENST00000618606 IFI27P40305 119 aaPredicted RBP-0.03□□□□□ -2.41
TARDBP-220ENST00000618606 KRTAP19-7Q3SYF9 63 aa-0.03□□□□□ -2.41
TARDBP-220ENST00000618606 ATP5EP2Q5VTU8 51 aa-0.03□□□□□ -2.41
TARDBP-220ENST00000618606 C18orf32Q8TCD1 76 aa-0.03□□□□□ -2.41
TARDBP-220ENST00000618606 LAMA5O15230 3695 aa-0.03□□□□□ -2.41
TARDBP-220ENST00000618606 PKHD1P08F94 4074 aa-0.03□□□□□ -2.41
TARDBP-220ENST00000618606 CUBNO60494 3623 aa-0.03□□□□□ -2.41
TARDBP-220ENST00000618606 TEX15Q9BXT5 2789 aa-0.03□□□□□ -2.41
TARDBP-220ENST00000618606 SVEP1Q4LDE5 3571 aa-0.04□□□□□ -2.42
TARDBP-220ENST00000618606 LTN1O94822 1766 aa-0.04□□□□□ -2.42
TARDBP-220ENST00000618606 BOD1L1Q8NFC6 3051 aa-0.04□□□□□ -2.42
TARDBP-220ENST00000618606 KALRNO60229 2985 aa-0.04□□□□□ -2.42
TARDBP-220ENST00000618606 FAT3Q8TDW7 4589 aa-0.04□□□□□ -2.42
TARDBP-220ENST00000618606 H3BNG1 76 aa-0.04□□□□□ -2.42
TARDBP-220ENST00000618606 HMGA1P17096 107 aaKnown RBP-0.04□□□□□ -2.42
TARDBP-220ENST00000618606 COX6B2Q6YFQ2 88 aa-0.04□□□□□ -2.42
TARDBP-220ENST00000618606 KDM5DQ9BY66 1539 aa-0.04□□□□□ -2.42
TARDBP-220ENST00000618606 MUC3AQ02505 3323 aa-0.04□□□□□ -2.42
TARDBP-220ENST00000618606 FAM186AA6NE01 2351 aa-0.04□□□□□ -2.42
TARDBP-220ENST00000618606 TACC2O95359 2948 aa-0.04□□□□□ -2.42
TARDBP-220ENST00000618606 CFAP47Q6ZTR5 3102 aa-0.04□□□□□ -2.42
TARDBP-220ENST00000618606 NIPBLQ6KC79 2804 aaeCLIP-0.05□□□□□ -2.42
TARDBP-220ENST00000618606 MUC17Q685J3 4493 aa-0.05□□□□□ -2.42
TARDBP-220ENST00000618606 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.05□□□□□ -2.42
TARDBP-220ENST00000618606 SPTAN1Q13813 2472 aaKnown RBP-0.05□□□□□ -2.42
TARDBP-220ENST00000618606 CFAP46Q8IYW2 2715 aa-0.05□□□□□ -2.42
TARDBP-220ENST00000618606 EYSQ5T1H1 3165 aa-0.05□□□□□ -2.42
TARDBP-220ENST00000618606 NWD1Q149M9 1564 aa-0.05□□□□□ -2.42
TARDBP-220ENST00000618606 LCE6AA0A183 80 aa-0.05□□□□□ -2.42
TARDBP-220ENST00000618606 NDUFA4O00483 81 aa-0.05□□□□□ -2.42
TARDBP-220ENST00000618606 KRTAP19-8Q3LI54 63 aa-0.05□□□□□ -2.42
TARDBP-220ENST00000618606 MAGI3Q5TCQ9 1506 aa-0.05□□□□□ -2.42
TARDBP-220ENST00000618606 ASPMQ8IZT6 3477 aa-0.05□□□□□ -2.42
TARDBP-220ENST00000618606 C5orf42Q9H799 3197 aa-0.05□□□□□ -2.42
TARDBP-220ENST00000618606 WDR87Q6ZQQ6 2873 aa-0.05□□□□□ -2.42
TARDBP-220ENST00000618606 NBPF19A0A087WUL8 3843 aa-0.05□□□□□ -2.42
TARDBP-220ENST00000618606 PLECQ15149 4684 aaKnown RBP-0.05□□□□□ -2.42
TARDBP-220ENST00000618606 RGPD8O14715 1765 aaPredicted RBP-0.06□□□□□ -2.42
TARDBP-220ENST00000618606 RGPD5Q99666 1765 aa-0.06□□□□□ -2.42
TARDBP-220ENST00000618606 ARFGEF2Q9Y6D5 1785 aa-0.06□□□□□ -2.42
TARDBP-220ENST00000618606 A0A0C4DFX4 3053 aa-0.06□□□□□ -2.42
TARDBP-220ENST00000618606 ABCC1P33527 1531 aa-0.06□□□□□ -2.42
TARDBP-220ENST00000618606 LINC00158P58513 81 aa-0.06□□□□□ -2.42
TARDBP-220ENST00000618606 KRTAP20-2Q3LI61 65 aa-0.06□□□□□ -2.42
TARDBP-220ENST00000618606 KRTAP6-2Q3LI66 62 aa-0.06□□□□□ -2.42
TARDBP-220ENST00000618606 LYSTQ99698 3801 aa-0.06□□□□□ -2.42
TARDBP-220ENST00000618606 PRO3102Q9H379 93 aa-0.06□□□□□ -2.42
TARDBP-220ENST00000618606 NBEAQ8NFP9 2946 aa-0.06□□□□□ -2.42
TARDBP-220ENST00000618606 APOBP04114 4563 aaKnown RBP-0.06□□□□□ -2.42
TARDBP-220ENST00000618606 RRBP1Q9P2E9 1410 aaKnown RBP-0.06□□□□□ -2.42
TARDBP-220ENST00000618606 BRCA2P51587 3418 aa-0.06□□□□□ -2.42
TARDBP-220ENST00000618606 DNAH2Q9P225 4427 aa-0.06□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms