RNA–Protein interactions for RNA: ENST00000618411.4

SRRT-217, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,893 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-217ENST00000618411 A6NED7 52 aa9.51□□□□□ -0.89
SRRT-217ENST00000618411 CNBPP62633 177 aaKnown RBP9.51□□□□□ -0.89
SRRT-217ENST00000618411 COA5Q86WW8 74 aa9.5□□□□□ -0.89
SRRT-217ENST00000618411 DNAH10OSP0CZ25 163 aa9.49□□□□□ -0.89
SRRT-217ENST00000618411 RBM12B-AS1Q9P1G2 102 aa9.49□□□□□ -0.89
SRRT-217ENST00000618411 IGLV7-46A0A075B6I9 117 aa9.49□□□□□ -0.89
SRRT-217ENST00000618411 PHF5AQ7RTV0 110 aaKnown RBP9.49□□□□□ -0.89
SRRT-217ENST00000618411 A8MWP4 228 aa9.49□□□□□ -0.89
SRRT-217ENST00000618411 A6NN06 94 aa9.48□□□□□ -0.89
SRRT-217ENST00000618411 CDC42SE1Q9NRR8 79 aa9.47□□□□□ -0.89
SRRT-217ENST00000618411 LINC00472Q9H8W2 130 aa9.45□□□□□ -0.9
SRRT-217ENST00000618411 F8P00451 2351 aa9.44□□□□□ -0.9
SRRT-217ENST00000618411 CASC10Q5T4H9 136 aa9.43□□□□□ -0.9
SRRT-217ENST00000618411 PRLHP81277 87 aa9.42□□□□□ -0.9
SRRT-217ENST00000618411 DEFB131BA0A096LNP1 70 aa9.42□□□□□ -0.9
SRRT-217ENST00000618411 LINC01558Q9Y6Z2 57 aa9.42□□□□□ -0.9
SRRT-217ENST00000618411 PKD1L1Q8TDX9 2849 aa9.42□□□□□ -0.9
SRRT-217ENST00000618411 PDZD2O15018 2839 aa9.41□□□□□ -0.9
SRRT-217ENST00000618411 PLAC8Q9NZF1 115 aa9.4□□□□□ -0.91
SRRT-217ENST00000618411 MMP24-AS1A0A0U1RRL7 71 aa9.38□□□□□ -0.91
SRRT-217ENST00000618411 NOTCH2Q04721 2471 aa9.38□□□□□ -0.91
SRRT-217ENST00000618411 SPRR1BP22528 89 aa9.38□□□□□ -0.91
SRRT-217ENST00000618411 C7orf65Q6ZTY9 151 aa9.37□□□□□ -0.91
SRRT-217ENST00000618411 USP24Q9UPU5 2620 aa9.37□□□□□ -0.91
SRRT-217ENST00000618411 SMR3AQ99954 134 aa9.36□□□□□ -0.91
SRRT-217ENST00000618411 H0Y9J4 135 aa9.36□□□□□ -0.91
SRRT-217ENST00000618411 TP53AIP1Q9HCN2 124 aa9.35□□□□□ -0.91
SRRT-217ENST00000618411 MOBPQ13875 183 aa9.35□□□□□ -0.91
SRRT-217ENST00000618411 PCOTHQ58A44 107 aa9.34□□□□□ -0.91
SRRT-217ENST00000618411 SPAG11AQ6PDA7 123 aa9.34□□□□□ -0.91
SRRT-217ENST00000618411 C11orf45Q8TAV5 145 aa9.34□□□□□ -0.91
SRRT-217ENST00000618411 TENM1Q9UKZ4 2725 aa9.34□□□□□ -0.91
SRRT-217ENST00000618411 ASB16-AS1Q495Z4 193 aa9.31□□□□□ -0.92
SRRT-217ENST00000618411 A0A096LNI7 61 aa9.3□□□□□ -0.92
SRRT-217ENST00000618411 Q6ZR54 194 aa9.3□□□□□ -0.92
SRRT-217ENST00000618411 TEP1Q99973 2627 aaKnown RBP9.29□□□□□ -0.92
SRRT-217ENST00000618411 ITPR2Q14571 2701 aa9.29□□□□□ -0.92
SRRT-217ENST00000618411 IGKV2-24A0A0C4DH68 120 aa9.28□□□□□ -0.92
SRRT-217ENST00000618411 SPINK7P58062 85 aa9.27□□□□□ -0.92
SRRT-217ENST00000618411 OTOGQ6ZRI0 2925 aa9.27□□□□□ -0.92
SRRT-217ENST00000618411 HRES1P13985 223 aa9.26□□□□□ -0.93
SRRT-217ENST00000618411 ATRQ13535 2644 aa9.25□□□□□ -0.93
SRRT-217ENST00000618411 BAHCC1Q9P281 2608 aa9.25□□□□□ -0.93
SRRT-217ENST00000618411 KMT2BQ9UMN6 2715 aaPredicted RBP9.25□□□□□ -0.93
SRRT-217ENST00000618411 TENM3Q9P273 2699 aa9.24□□□□□ -0.93
SRRT-217ENST00000618411 KRTAP10-11P60412 298 aa9.24□□□□□ -0.93
SRRT-217ENST00000618411 OXLD1Q5BKU9 147 aa9.24□□□□□ -0.93
SRRT-217ENST00000618411 C8orf17Q9NRJ1 99 aa9.22□□□□□ -0.93
SRRT-217ENST00000618411 KRTAP11-1Q8IUC1 163 aa9.22□□□□□ -0.93
SRRT-217ENST00000618411 Q96NJ1 140 aa9.22□□□□□ -0.93
SRRT-217ENST00000618411 TRRAPQ9Y4A5 3859 aa9.21□□□□□ -0.93
SRRT-217ENST00000618411 TENM2Q9NT68 2774 aa9.19□□□□□ -0.94
SRRT-217ENST00000618411 INAFM1C9JVW0 142 aa9.19□□□□□ -0.94
SRRT-217ENST00000618411 SRRM2Q9UQ35 2752 aaKnown RBP9.19□□□□□ -0.94
SRRT-217ENST00000618411 DNAH1Q9P2D7 4330 aa9.17□□□□□ -0.94
SRRT-217ENST00000618411 TENM4Q6N022 2769 aa9.16□□□□□ -0.94
SRRT-217ENST00000618411 A0A1B0GVX0 72 aa9.15□□□□□ -0.94
SRRT-217ENST00000618411 MRPL34Q9BQ48 92 aaKnown RBP9.14□□□□□ -0.95
SRRT-217ENST00000618411 IGHV6-1A0A0B4J1U7 121 aa9.12□□□□□ -0.95
SRRT-217ENST00000618411 CHTF8P0CG12 524 aa9.12□□□□□ -0.95
SRRT-217ENST00000618411 LINC00313P59037 77 aa9.11□□□□□ -0.95
SRRT-217ENST00000618411 NSD1Q96L73 2696 aaPredicted RBP9.11□□□□□ -0.95
SRRT-217ENST00000618411 PRR26Q8N8Z3 221 aa9.11□□□□□ -0.95
SRRT-217ENST00000618411 FASNP49327 2511 aaKnown RBP9.11□□□□□ -0.95
SRRT-217ENST00000618411 KRTAP13-1Q8IUC0 172 aa9.1□□□□□ -0.95
SRRT-217ENST00000618411 C8orf87E5RJ46 101 aa9.1□□□□□ -0.95
SRRT-217ENST00000618411 CDK2AP2O75956 126 aa9.09□□□□□ -0.95
SRRT-217ENST00000618411 IGLV9-49A0A0B4J1Y8 123 aa9.08□□□□□ -0.96
SRRT-217ENST00000618411 C14orf177Q52M58 125 aa9.08□□□□□ -0.96
SRRT-217ENST00000618411 MDFIQ99750 246 aa9.06□□□□□ -0.96
SRRT-217ENST00000618411 KRTAP1-5Q9BYS1 174 aa9.06□□□□□ -0.96
SRRT-217ENST00000618411 ACYP2P14621 99 aa9.06□□□□□ -0.96
SRRT-217ENST00000618411 FLNBO75369 2602 aaKnown RBP9.06□□□□□ -0.96
SRRT-217ENST00000618411 PLA2G1BP04054 148 aaKnown RBP9.05□□□□□ -0.96
SRRT-217ENST00000618411 HELZ2Q9BYK8 2649 aaKnown RBP9.04□□□□□ -0.96
SRRT-217ENST00000618411 PRAC1Q96KF2 57 aa9.03□□□□□ -0.96
SRRT-217ENST00000618411 LINC00483Q53H64 154 aa9.02□□□□□ -0.96
SRRT-217ENST00000618411 A0A087X002 238 aa9.02□□□□□ -0.97
SRRT-217ENST00000618411 NOTCH2NLQ7Z3S9 236 aa9.02□□□□□ -0.97
SRRT-217ENST00000618411 KRTAP13-3Q3SY46 172 aa9.01□□□□□ -0.97
SRRT-217ENST00000618411 K7EIL1 84 aa9.01□□□□□ -0.97
SRRT-217ENST00000618411 ANK2Q01484 3957 aa9□□□□□ -0.97
SRRT-217ENST00000618411 Q5W150 140 aa8.99□□□□□ -0.97
SRRT-217ENST00000618411 MAST4O15021 2626 aa8.98□□□□□ -0.97
SRRT-217ENST00000618411 FBN1P35555 2871 aaKnown RBP8.97□□□□□ -0.97
SRRT-217ENST00000618411 SPATA8Q6RVD6 105 aa8.97□□□□□ -0.97
SRRT-217ENST00000618411 C4orf48Q5BLP8 95 aa8.97□□□□□ -0.97
SRRT-217ENST00000618411 LINC01554Q52M75 96 aa8.96□□□□□ -0.97
SRRT-217ENST00000618411 ADM2Q7Z4H4 148 aa8.96□□□□□ -0.98
SRRT-217ENST00000618411 DMAC1Q96GE9 116 aa8.96□□□□□ -0.98
SRRT-217ENST00000618411 WWC2-AS2Q96NR7 200 aa8.96□□□□□ -0.98
SRRT-217ENST00000618411 ZNF706Q9Y5V0 76 aaPredicted RBP8.95□□□□□ -0.98
SRRT-217ENST00000618411 A0A1B0GU69 56 aa8.94□□□□□ -0.98
SRRT-217ENST00000618411 RTL8CO15255 209 aa8.94□□□□□ -0.98
SRRT-217ENST00000618411 J3QKU1 62 aa8.94□□□□□ -0.98
SRRT-217ENST00000618411 ALMS1Q8TCU4 4167 aa8.94□□□□□ -0.98
SRRT-217ENST00000618411 DNAH10Q8IVF4 4471 aa8.94□□□□□ -0.98
SRRT-217ENST00000618411 PANO1I0J062 215 aa8.93□□□□□ -0.98
SRRT-217ENST00000618411 HECTD1Q9ULT8 2610 aa8.9□□□□□ -0.98
SRRT-217ENST00000618411 UBE2DNLQ8IWF7 75 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms