RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 NSD1Q96L73 2696 aaPredicted RBP6.69□□□□□ -1.34
POLR2A-209ENST00000617998 PRR15Q8IV56 129 aa6.69□□□□□ -1.34
POLR2A-209ENST00000617998 FAM218AQ96MZ4 157 aa6.68□□□□□ -1.34
POLR2A-209ENST00000617998 LOC110117498A0A087WWA1 95 aa6.68□□□□□ -1.34
POLR2A-209ENST00000617998 H3BPC8 53 aa6.68□□□□□ -1.34
POLR2A-209ENST00000617998 C4orf26Q17RF5 130 aa6.66□□□□□ -1.34
POLR2A-209ENST00000617998 FRYQ5TBA9 3013 aa6.65□□□□□ -1.34
POLR2A-209ENST00000617998 WDFY4Q6ZS81 3184 aa6.65□□□□□ -1.34
POLR2A-209ENST00000617998 CRYBG3Q68DQ2 2970 aa6.65□□□□□ -1.34
POLR2A-209ENST00000617998 FLG2Q5D862 2391 aaPredicted RBP6.65□□□□□ -1.35
POLR2A-209ENST00000617998 LINC00310P59036 64 aa6.64□□□□□ -1.35
POLR2A-209ENST00000617998 SPINT4Q6UDR6 99 aa6.63□□□□□ -1.35
POLR2A-209ENST00000617998 KMT2BQ9UMN6 2715 aaPredicted RBP6.63□□□□□ -1.35
POLR2A-209ENST00000617998 PLAC4Q8WY50 150 aa6.61□□□□□ -1.35
POLR2A-209ENST00000617998 S4R3F8 94 aa6.61□□□□□ -1.35
POLR2A-209ENST00000617998 CFAP54Q96N23 3096 aa6.58□□□□□ -1.36
POLR2A-209ENST00000617998 ZCCHC13Q8WW36 166 aaKnown RBP6.58□□□□□ -1.36
POLR2A-209ENST00000617998 BRCA2P51587 3418 aa6.58□□□□□ -1.36
POLR2A-209ENST00000617998 A0A0D9SG42 100 aa6.56□□□□□ -1.36
POLR2A-209ENST00000617998 ITPR1Q14643 2758 aa6.55□□□□□ -1.36
POLR2A-209ENST00000617998 TNRC18O15417 2968 aaPredicted RBP6.55□□□□□ -1.36
POLR2A-209ENST00000617998 LITAFQ99732 161 aa6.55□□□□□ -1.36
POLR2A-209ENST00000617998 PRO0628Q9UI54 55 aa6.55□□□□□ -1.36
POLR2A-209ENST00000617998 LINC01600Q96MT4 127 aa6.54□□□□□ -1.36
POLR2A-209ENST00000617998 TRIOO75962 3097 aa6.54□□□□□ -1.36
POLR2A-209ENST00000617998 SPINK7P58062 85 aa6.53□□□□□ -1.36
POLR2A-209ENST00000617998 R4GN34 69 aa6.52□□□□□ -1.37
POLR2A-209ENST00000617998 PANO1I0J062 215 aa6.52□□□□□ -1.37
POLR2A-209ENST00000617998 Q6ZRN7 208 aaPredicted RBP6.51□□□□□ -1.37
POLR2A-209ENST00000617998 LCA10Q71F78 164 aa6.49□□□□□ -1.37
POLR2A-209ENST00000617998 A0A1W2PNM2 257 aa6.49□□□□□ -1.37
POLR2A-209ENST00000617998 FAM104AQ969W3 186 aa6.45□□□□□ -1.38
POLR2A-209ENST00000617998 FRYLO94915 3013 aa6.45□□□□□ -1.38
POLR2A-209ENST00000617998 A0A087X002 238 aa6.45□□□□□ -1.38
POLR2A-209ENST00000617998 CRIPTQ9P021 101 aa6.44□□□□□ -1.38
POLR2A-209ENST00000617998 EIF4EBP3O60516 100 aaPredicted RBP6.44□□□□□ -1.38
POLR2A-209ENST00000617998 TACC2O95359 2948 aa6.43□□□□□ -1.38
POLR2A-209ENST00000617998 SMCPP49901 116 aaPredicted RBP6.43□□□□□ -1.38
POLR2A-209ENST00000617998 UTP20O75691 2785 aaKnown RBP6.43□□□□□ -1.38
POLR2A-209ENST00000617998 KRTAP26-1Q6PEX3 210 aa6.43□□□□□ -1.38
POLR2A-209ENST00000617998 A8MUN3 132 aa6.42□□□□□ -1.38
POLR2A-209ENST00000617998 C20orf166-AS1Q96NR2 134 aa6.42□□□□□ -1.38
POLR2A-209ENST00000617998 COL6A3P12111 3177 aa6.41□□□□□ -1.38
POLR2A-209ENST00000617998 XIRP2A4UGR9 3374 aa6.4□□□□□ -1.38
POLR2A-209ENST00000617998 SPRR1AP35321 89 aa6.4□□□□□ -1.39
POLR2A-209ENST00000617998 SZT2Q5T011 3432 aa6.39□□□□□ -1.39
POLR2A-209ENST00000617998 COL12A1Q99715 3063 aa6.39□□□□□ -1.39
POLR2A-209ENST00000617998 APCP25054 2843 aa6.39□□□□□ -1.39
POLR2A-209ENST00000617998 SPRR1BP22528 89 aa6.38□□□□□ -1.39
POLR2A-209ENST00000617998 LAMA2P24043 3122 aaKnown RBP6.37□□□□□ -1.39
POLR2A-209ENST00000617998 COA5Q86WW8 74 aa6.36□□□□□ -1.39
POLR2A-209ENST00000617998 UQCR11O14957 56 aa6.36□□□□□ -1.39
POLR2A-209ENST00000617998 LINC00483Q53H64 154 aa6.36□□□□□ -1.39
POLR2A-209ENST00000617998 RPS29P62273 56 aaKnown RBP6.36□□□□□ -1.39
POLR2A-209ENST00000617998 KRTAP29-1A8MX34 341 aaPredicted RBP6.34□□□□□ -1.39
POLR2A-209ENST00000617998 M0QZ58 72 aa6.34□□□□□ -1.4
POLR2A-209ENST00000617998 EYSQ5T1H1 3165 aa6.32□□□□□ -1.4
POLR2A-209ENST00000617998 ATMQ13315 3056 aa6.32□□□□□ -1.4
POLR2A-209ENST00000617998 NBEAL2Q6ZNJ1 2754 aa6.32□□□□□ -1.4
POLR2A-209ENST00000617998 PRO0461Q9UI25 63 aa6.31□□□□□ -1.4
POLR2A-209ENST00000617998 ASH1LQ9NR48 2969 aaKnown RBP6.31□□□□□ -1.4
POLR2A-209ENST00000617998 DMXL2Q8TDJ6 3036 aa6.3□□□□□ -1.4
POLR2A-209ENST00000617998 RPS28P62857 69 aaKnown RBP6.3□□□□□ -1.4
POLR2A-209ENST00000617998 LAMA1P25391 3075 aa6.28□□□□□ -1.4
POLR2A-209ENST00000617998 UNC80Q8N2C7 3258 aa6.28□□□□□ -1.4
POLR2A-209ENST00000617998 RPL37P61927 97 aaKnown RBP6.28□□□□□ -1.4
POLR2A-209ENST00000617998 NBEAQ8NFP9 2946 aa6.27□□□□□ -1.41
POLR2A-209ENST00000617998 H1FX-AS1Q4G0G2 97 aa6.26□□□□□ -1.41
POLR2A-209ENST00000617998 CDH23Q9H251 3354 aa6.26□□□□□ -1.41
POLR2A-209ENST00000617998 MIR22HGQ0VDD5 57 aa6.25□□□□□ -1.41
POLR2A-209ENST00000617998 Q5W150 140 aa6.23□□□□□ -1.41
POLR2A-209ENST00000617998 CDC42SE1Q9NRR8 79 aa6.23□□□□□ -1.41
POLR2A-209ENST00000617998 TENM2Q9NT68 2774 aa6.23□□□□□ -1.41
POLR2A-209ENST00000617998 Q75L30 129 aa6.23□□□□□ -1.41
POLR2A-209ENST00000617998 LRBAP50851 2863 aa6.23□□□□□ -1.41
POLR2A-209ENST00000617998 ADM2Q7Z4H4 148 aa6.21□□□□□ -1.42
POLR2A-209ENST00000617998 MMP24-AS1A0A0U1RRL7 71 aa6.21□□□□□ -1.42
POLR2A-209ENST00000617998 A0A1B0GU33 70 aa6.21□□□□□ -1.42
POLR2A-209ENST00000617998 Q8N9P0 234 aaPredicted RBP6.21□□□□□ -1.42
POLR2A-209ENST00000617998 Q8NDZ9 215 aa6.2□□□□□ -1.42
POLR2A-209ENST00000617998 KRTAP13-2Q52LG2 175 aa6.2□□□□□ -1.42
POLR2A-209ENST00000617998 VPS13AQ96RL7 3174 aa6.2□□□□□ -1.42
POLR2A-209ENST00000617998 NIPBLQ6KC79 2804 aaeCLIP6.2□□□□□ -1.425e-7■■□□□ 13.4
POLR2A-209ENST00000617998 TENM1Q9UKZ4 2725 aa6.18□□□□□ -1.42
POLR2A-209ENST00000617998 CYP4F30PQ9H0H9 118 aa6.18□□□□□ -1.42
POLR2A-209ENST00000617998 VCANP13611 3396 aa6.18□□□□□ -1.42
POLR2A-209ENST00000617998 A0A1B0GVY2 172 aa6.17□□□□□ -1.42
POLR2A-209ENST00000617998 LINC00472Q9H8W2 130 aa6.17□□□□□ -1.42
POLR2A-209ENST00000617998 KLKP1Q107X0 134 aa6.17□□□□□ -1.42
POLR2A-209ENST00000617998 KRTAP10-10P60014 251 aa6.16□□□□□ -1.42
POLR2A-209ENST00000617998 TPRXLQ17RH7 258 aa6.16□□□□□ -1.42
POLR2A-209ENST00000617998 KTN1-AS1Q86SY8 53 aa6.15□□□□□ -1.42
POLR2A-209ENST00000617998 TENM3Q9P273 2699 aa6.14□□□□□ -1.43
POLR2A-209ENST00000617998 KRTAP11-1Q8IUC1 163 aa6.14□□□□□ -1.43
POLR2A-209ENST00000617998 DMAC1Q96GE9 116 aa6.13□□□□□ -1.43
POLR2A-209ENST00000617998 KALRNO60229 2985 aa6.12□□□□□ -1.43
POLR2A-209ENST00000617998 ZZEF1O43149 2961 aa6.1□□□□□ -1.43
POLR2A-209ENST00000617998 BOD1L1Q8NFC6 3051 aa6.1□□□□□ -1.43
POLR2A-209ENST00000617998 H7BZZ5 65 aa6.09□□□□□ -1.43
POLR2A-209ENST00000617998 A8MUU9 505 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms