RNA–Protein interactions for RNA: ENST00000617539.1

NEDD4L-237, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene NEDD4L, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-237ENST00000617539 TCL1BO95988 128 aa11.86□□□□□ -0.51
NEDD4L-237ENST00000617539 C12orf57Q99622 126 aa11.86□□□□□ -0.51
NEDD4L-237ENST00000617539 IGFL1Q6UW32 110 aa11.84□□□□□ -0.51
NEDD4L-237ENST00000617539 CLEC2BQ92478 149 aa11.83□□□□□ -0.52
NEDD4L-237ENST00000617539 S100A6P06703 90 aa11.82□□□□□ -0.52
NEDD4L-237ENST00000617539 Q6JHZ5 121 aa11.81□□□□□ -0.52
NEDD4L-237ENST00000617539 TRBV7-7A0A0K0K1E9 115 aa11.8□□□□□ -0.52
NEDD4L-237ENST00000617539 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.8□□□□□ -0.52
NEDD4L-237ENST00000617539 HIST1H4GQ99525 98 aa11.8□□□□□ -0.52
NEDD4L-237ENST00000617539 SCGB1D1O95968 90 aa11.79□□□□□ -0.52
NEDD4L-237ENST00000617539 COX8AP10176 69 aa11.79□□□□□ -0.52
NEDD4L-237ENST00000617539 OCIAD2Q56VL3 154 aa11.79□□□□□ -0.52
NEDD4L-237ENST00000617539 S100A1P23297 94 aa11.78□□□□□ -0.52
NEDD4L-237ENST00000617539 BVES-AS1Q5T3Y7 98 aa11.77□□□□□ -0.53
NEDD4L-237ENST00000617539 PPDPFLQ8WWR9 84 aa11.74□□□□□ -0.53
NEDD4L-237ENST00000617539 DLEU1O43261 78 aa11.73□□□□□ -0.53
NEDD4L-237ENST00000617539 FSIP2Q5CZC0 6907 aa11.73□□□□□ -0.53
NEDD4L-237ENST00000617539 H3BUT2 72 aa11.72□□□□□ -0.53
NEDD4L-237ENST00000617539 CFC1BP0CG36 223 aa11.72□□□□□ -0.53
NEDD4L-237ENST00000617539 CFC1P0CG37 223 aa11.72□□□□□ -0.53
NEDD4L-237ENST00000617539 FLGP20930 4061 aaPredicted RBP11.71□□□□□ -0.53
NEDD4L-237ENST00000617539 LORP23490 312 aaPredicted RBP11.71□□□□□ -0.53
NEDD4L-237ENST00000617539 C14orf144Q96I85 54 aa11.69□□□□□ -0.54
NEDD4L-237ENST00000617539 SNHG12Q9BXW3 62 aa11.69□□□□□ -0.54
NEDD4L-237ENST00000617539 KRTAP10-6P60371 365 aaPredicted RBP11.68□□□□□ -0.54
NEDD4L-237ENST00000617539 OBSCN-AS1Q96MR7 158 aa11.67□□□□□ -0.54
NEDD4L-237ENST00000617539 FAM218AQ96MZ4 157 aa11.67□□□□□ -0.54
NEDD4L-237ENST00000617539 C2orf91Q6ZV80 131 aa11.65□□□□□ -0.54
NEDD4L-237ENST00000617539 HIGD1BQ9P298 99 aa11.65□□□□□ -0.54
NEDD4L-237ENST00000617539 A0A0B4J2C4 111 aa11.64□□□□□ -0.55
NEDD4L-237ENST00000617539 RAB37Q96AX2 223 aa11.64□□□□□ -0.55
NEDD4L-237ENST00000617539 CRCT1Q9UGL9 99 aa11.64□□□□□ -0.55
NEDD4L-237ENST00000617539 PAM16Q9Y3D7 125 aa11.64□□□□□ -0.55
NEDD4L-237ENST00000617539 Q75L30 129 aa11.63□□□□□ -0.55
NEDD4L-237ENST00000617539 LST1O00453 97 aa11.62□□□□□ -0.55
NEDD4L-237ENST00000617539 SPATA45Q537H7 98 aa11.62□□□□□ -0.55
NEDD4L-237ENST00000617539 COX6B2Q6YFQ2 88 aa11.62□□□□□ -0.55
NEDD4L-237ENST00000617539 Q6Q795 121 aa11.61□□□□□ -0.55
NEDD4L-237ENST00000617539 H0YGX0 51 aa11.6□□□□□ -0.55
NEDD4L-237ENST00000617539 NDUFV3P56181 108 aaKnown RBP11.58□□□□□ -0.56
NEDD4L-237ENST00000617539 M0R2T5 61 aa11.57□□□□□ -0.56
NEDD4L-237ENST00000617539 VAMP8Q9BV40 100 aa11.56□□□□□ -0.56
NEDD4L-237ENST00000617539 ATP11AUNQ6ZP68 121 aa11.55□□□□□ -0.56
NEDD4L-237ENST00000617539 TEN1Q86WV5 123 aa11.55□□□□□ -0.56
NEDD4L-237ENST00000617539 CEND1Q8N111 149 aa11.55□□□□□ -0.56
NEDD4L-237ENST00000617539 SS18L2Q9UHA2 77 aa11.54□□□□□ -0.56
NEDD4L-237ENST00000617539 Q96NJ1 140 aa11.53□□□□□ -0.56
NEDD4L-237ENST00000617539 SNCGO76070 127 aa11.52□□□□□ -0.57
NEDD4L-237ENST00000617539 PRO1854Q9UHT4 67 aa11.52□□□□□ -0.57
NEDD4L-237ENST00000617539 A0A087WSZ3 146 aa11.51□□□□□ -0.57
NEDD4L-237ENST00000617539 FXYD2P54710 66 aa11.51□□□□□ -0.57
NEDD4L-237ENST00000617539 H3BMG7 143 aa11.5□□□□□ -0.57
NEDD4L-237ENST00000617539 C20orf166-AS1Q96NR2 134 aa11.5□□□□□ -0.57
NEDD4L-237ENST00000617539 A0A1B0GX51 115 aa11.49□□□□□ -0.57
NEDD4L-237ENST00000617539 TRIAP1O43715 76 aa11.48□□□□□ -0.57
NEDD4L-237ENST00000617539 A8MUU9 505 aa11.47□□□□□ -0.57
NEDD4L-237ENST00000617539 FABP2P12104 132 aa11.47□□□□□ -0.57
NEDD4L-237ENST00000617539 TMEM238LA0A1B0GVL6 79 aa11.46□□□□□ -0.57
NEDD4L-237ENST00000617539 A0A1W2PNM2 257 aa11.46□□□□□ -0.57
NEDD4L-237ENST00000617539 A6NJY4 79 aa11.46□□□□□ -0.57
NEDD4L-237ENST00000617539 DSCR10P59022 87 aa11.41□□□□□ -0.58
NEDD4L-237ENST00000617539 GHRHP01286 108 aa11.4□□□□□ -0.58
NEDD4L-237ENST00000617539 K7ERJ3 54 aa11.38□□□□□ -0.59
NEDD4L-237ENST00000617539 PYY3Q5JQD4 70 aa11.36□□□□□ -0.59
NEDD4L-237ENST00000617539 SIGMAR1Q99720 223 aa11.36□□□□□ -0.59
NEDD4L-237ENST00000617539 A0A1B0GV72 72 aa11.35□□□□□ -0.59
NEDD4L-237ENST00000617539 HSD52Q0P140 79 aa11.35□□□□□ -0.59
NEDD4L-237ENST00000617539 ORMDL1Q9P0S3 153 aa11.34□□□□□ -0.59
NEDD4L-237ENST00000617539 TRBV7-4A0A0J9YYF1 115 aa11.33□□□□□ -0.6
NEDD4L-237ENST00000617539 ANKRD29Q8N6D5 301 aa11.33□□□□□ -0.6
NEDD4L-237ENST00000617539 KRTAP16-1A8MUX0 517 aa11.32□□□□□ -0.6
NEDD4L-237ENST00000617539 DNAL4O96015 105 aa11.32□□□□□ -0.6
NEDD4L-237ENST00000617539 PSMB2P49721 201 aa11.31□□□□□ -0.6
NEDD4L-237ENST00000617539 IGKV4-1P06312 121 aa11.3□□□□□ -0.6
NEDD4L-237ENST00000617539 NOTCH2NLQ7Z3S9 236 aa11.29□□□□□ -0.6
NEDD4L-237ENST00000617539 LINC00313P59037 77 aa11.28□□□□□ -0.6
NEDD4L-237ENST00000617539 H3BQ85 93 aa11.26□□□□□ -0.61
NEDD4L-237ENST00000617539 TMEM256-PLSCR3K7ERE1 68 aa11.26□□□□□ -0.61
NEDD4L-237ENST00000617539 DEFB116Q30KQ4 102 aa11.26□□□□□ -0.61
NEDD4L-237ENST00000617539 LINC00472Q9H8W2 130 aa11.26□□□□□ -0.61
NEDD4L-237ENST00000617539 CCKP06307 115 aa11.25□□□□□ -0.61
NEDD4L-237ENST00000617539 KRTAP9-8Q9BYQ0 159 aa11.25□□□□□ -0.61
NEDD4L-237ENST00000617539 TRBV20-1A0A075B6N2 111 aa11.23□□□□□ -0.61
NEDD4L-237ENST00000617539 COX6CP09669 75 aa11.23□□□□□ -0.61
NEDD4L-237ENST00000617539 TRACP01848 142 aa11.21□□□□□ -0.61
NEDD4L-237ENST00000617539 UBE2V1Q13404 147 aa11.21□□□□□ -0.61
NEDD4L-237ENST00000617539 UQCR10Q9UDW1 63 aa11.19□□□□□ -0.62
NEDD4L-237ENST00000617539 IGHV6-1A0A0B4J1U7 121 aa11.17□□□□□ -0.62
NEDD4L-237ENST00000617539 MPLKIPQ8TAP9 179 aa11.16□□□□□ -0.62
NEDD4L-237ENST00000617539 HRES1P13985 223 aa11.14□□□□□ -0.63
NEDD4L-237ENST00000617539 USH2AO75445 5202 aa11.14□□□□□ -0.63
NEDD4L-237ENST00000617539 VPS25Q9BRG1 176 aa11.12□□□□□ -0.63
NEDD4L-237ENST00000617539 TMA7Q9Y2S6 64 aaKnown RBP11.11□□□□□ -0.63
NEDD4L-237ENST00000617539 RBM3P98179 157 aaKnown RBP11.1□□□□□ -0.63
NEDD4L-237ENST00000617539 A0A1B0GVX0 72 aa11.09□□□□□ -0.63
NEDD4L-237ENST00000617539 SCGB1C2P0DMR2 95 aa11.09□□□□□ -0.63
NEDD4L-237ENST00000617539 FAM236DA0A1B0GTK5 79 aa11.08□□□□□ -0.64
NEDD4L-237ENST00000617539 FAM236CP0DP71 79 aa11.08□□□□□ -0.64
NEDD4L-237ENST00000617539 MT2AP02795 61 aa11.07□□□□□ -0.64
NEDD4L-237ENST00000617539 SSPOA2VEC9 5147 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms