RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 PRO0461Q9UI25 63 aa6.57□□□□□ -1.36
SMARCA1-205ENST00000617310 SERP1Q9Y6X1 66 aa6.56□□□□□ -1.36
SMARCA1-205ENST00000617310 ZNF861PO60384 105 aa6.56□□□□□ -1.36
SMARCA1-205ENST00000617310 WIPF1O43516 503 aa6.56□□□□□ -1.36
SMARCA1-205ENST00000617310 Q6ZQT0 140 aa6.56□□□□□ -1.36
SMARCA1-205ENST00000617310 hDV103S1A0JD37 113 aa6.56□□□□□ -1.36
SMARCA1-205ENST00000617310 CDIP1Q9H305 208 aa6.56□□□□□ -1.36
SMARCA1-205ENST00000617310 ERC2-IT1O76042 136 aa6.55□□□□□ -1.36
SMARCA1-205ENST00000617310 TMEM254Q8TBM7 123 aa6.55□□□□□ -1.36
SMARCA1-205ENST00000617310 NDUFC1O43677 76 aa6.54□□□□□ -1.36
SMARCA1-205ENST00000617310 C1orf64Q8NEQ6 169 aa6.54□□□□□ -1.36
SMARCA1-205ENST00000617310 Q96NJ1 140 aa6.53□□□□□ -1.36
SMARCA1-205ENST00000617310 TRBV7-7A0A0K0K1E9 115 aa6.53□□□□□ -1.36
SMARCA1-205ENST00000617310 SVIPQ8NHG7 77 aa6.52□□□□□ -1.37
SMARCA1-205ENST00000617310 A6NED7 52 aa6.51□□□□□ -1.37
SMARCA1-205ENST00000617310 LINC00313P59037 77 aa6.51□□□□□ -1.37
SMARCA1-205ENST00000617310 LINC00336Q6ZUF6 198 aa6.51□□□□□ -1.37
SMARCA1-205ENST00000617310 Q8N377 158 aa6.51□□□□□ -1.37
SMARCA1-205ENST00000617310 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.51□□□□□ -1.37
SMARCA1-205ENST00000617310 C9orf92A6NGG3 77 aa6.51□□□□□ -1.37
SMARCA1-205ENST00000617310 IGFL1Q6UW32 110 aa6.51□□□□□ -1.37
SMARCA1-205ENST00000617310 TENM1Q9UKZ4 2725 aa6.5□□□□□ -1.37
SMARCA1-205ENST00000617310 CXCL6P80162 114 aa6.5□□□□□ -1.37
SMARCA1-205ENST00000617310 IGLV7-43P04211 117 aa6.5□□□□□ -1.37
SMARCA1-205ENST00000617310 LINC00304Q8N9R0 145 aa6.5□□□□□ -1.37
SMARCA1-205ENST00000617310 CNBPP62633 177 aaKnown RBP6.49□□□□□ -1.37
SMARCA1-205ENST00000617310 MXRA5Q9NR99 2828 aa6.49□□□□□ -1.37
SMARCA1-205ENST00000617310 TRRAPQ9Y4A5 3859 aa6.48□□□□□ -1.37
SMARCA1-205ENST00000617310 A0A0U1RQV1 116 aa6.48□□□□□ -1.37
SMARCA1-205ENST00000617310 K7ERS5 55 aa6.48□□□□□ -1.37
SMARCA1-205ENST00000617310 KRTAP1-5Q9BYS1 174 aa6.48□□□□□ -1.37
SMARCA1-205ENST00000617310 K7EQZ3 153 aa6.48□□□□□ -1.37
SMARCA1-205ENST00000617310 TRBV7-4A0A0J9YYF1 115 aa6.48□□□□□ -1.37
SMARCA1-205ENST00000617310 TLX1NBP0CAT3 122 aa6.48□□□□□ -1.37
SMARCA1-205ENST00000617310 DSCR10P59022 87 aa6.47□□□□□ -1.37
SMARCA1-205ENST00000617310 OBSCN-AS1Q96MR7 158 aa6.47□□□□□ -1.37
SMARCA1-205ENST00000617310 LOC110117498A0A087WWA1 95 aa6.46□□□□□ -1.38
SMARCA1-205ENST00000617310 C7orf65Q6ZTY9 151 aa6.45□□□□□ -1.38
SMARCA1-205ENST00000617310 PRR15LQ9BU68 103 aa6.45□□□□□ -1.38
SMARCA1-205ENST00000617310 FAM104AQ969W3 186 aa6.45□□□□□ -1.38
SMARCA1-205ENST00000617310 ATP11AUNQ6ZP68 121 aa6.45□□□□□ -1.38
SMARCA1-205ENST00000617310 PSPHP1O15172 72 aa6.44□□□□□ -1.38
SMARCA1-205ENST00000617310 TENM2Q9NT68 2774 aa6.44□□□□□ -1.38
SMARCA1-205ENST00000617310 SSBP3-AS1Q7Z2R9 100 aa6.43□□□□□ -1.38
SMARCA1-205ENST00000617310 SPRR4Q96PI1 79 aa6.43□□□□□ -1.38
SMARCA1-205ENST00000617310 ATP5EP56381 51 aaPredicted RBP6.43□□□□□ -1.38
SMARCA1-205ENST00000617310 TRAV22A0A0B4J277 110 aa6.42□□□□□ -1.38
SMARCA1-205ENST00000617310 VWFP04275 2813 aa6.42□□□□□ -1.38
SMARCA1-205ENST00000617310 FBN1P35555 2871 aaKnown RBP6.42□□□□□ -1.38
SMARCA1-205ENST00000617310 COX6B2Q6YFQ2 88 aa6.42□□□□□ -1.38
SMARCA1-205ENST00000617310 PRR26Q8N8Z3 221 aa6.41□□□□□ -1.38
SMARCA1-205ENST00000617310 A8MWP4 228 aa6.4□□□□□ -1.38
SMARCA1-205ENST00000617310 TP53AIP1Q9HCN2 124 aa6.39□□□□□ -1.39
SMARCA1-205ENST00000617310 PLA2G2DQ9UNK4 145 aa6.39□□□□□ -1.39
SMARCA1-205ENST00000617310 SRRM2Q9UQ35 2752 aaKnown RBP6.39□□□□□ -1.39
SMARCA1-205ENST00000617310 A0A1W2PNM2 257 aa6.39□□□□□ -1.39
SMARCA1-205ENST00000617310 V9GYY9 64 aa6.39□□□□□ -1.39
SMARCA1-205ENST00000617310 A0A1B0GW54 56 aa6.38□□□□□ -1.39
SMARCA1-205ENST00000617310 MRPL34Q9BQ48 92 aaKnown RBP6.38□□□□□ -1.39
SMARCA1-205ENST00000617310 IGLV8-61A0A075B6I0 122 aa6.38□□□□□ -1.39
SMARCA1-205ENST00000617310 Q8NDZ9 215 aa6.37□□□□□ -1.39
SMARCA1-205ENST00000617310 SMIM26A0A096LP01 95 aa6.37□□□□□ -1.39
SMARCA1-205ENST00000617310 C8orf17Q9NRJ1 99 aa6.36□□□□□ -1.39
SMARCA1-205ENST00000617310 SPAG11AQ6PDA7 123 aa6.35□□□□□ -1.39
SMARCA1-205ENST00000617310 OTOGQ6ZRI0 2925 aa6.35□□□□□ -1.39
SMARCA1-205ENST00000617310 ANK3Q12955 4377 aaKnown RBP6.35□□□□□ -1.39
SMARCA1-205ENST00000617310 KRTAP10-2P60368 255 aa6.35□□□□□ -1.39
SMARCA1-205ENST00000617310 PRR15Q8IV56 129 aa6.35□□□□□ -1.39
SMARCA1-205ENST00000617310 A0A1B0GVX0 72 aa6.33□□□□□ -1.4
SMARCA1-205ENST00000617310 C8orf87E5RJ46 101 aa6.32□□□□□ -1.4
SMARCA1-205ENST00000617310 LCE6AA0A183 80 aa6.32□□□□□ -1.4
SMARCA1-205ENST00000617310 PDZD2O15018 2839 aa6.31□□□□□ -1.4
SMARCA1-205ENST00000617310 KRTAP10-1P60331 282 aa6.3□□□□□ -1.4
SMARCA1-205ENST00000617310 IGLV5-37A0A075B6J1 123 aa6.3□□□□□ -1.4
SMARCA1-205ENST00000617310 ANK2Q01484 3957 aa6.3□□□□□ -1.4
SMARCA1-205ENST00000617310 ACYP2P14621 99 aa6.3□□□□□ -1.4
SMARCA1-205ENST00000617310 A0A1B0GU69 56 aa6.27□□□□□ -1.41
SMARCA1-205ENST00000617310 PANO1I0J062 215 aa6.27□□□□□ -1.41
SMARCA1-205ENST00000617310 TGP01266 2768 aa6.27□□□□□ -1.41
SMARCA1-205ENST00000617310 PLAC8Q9NZF1 115 aa6.27□□□□□ -1.41
SMARCA1-205ENST00000617310 LOC101927531A0A1B0GV80 90 aa6.26□□□□□ -1.41
SMARCA1-205ENST00000617310 KRTAP26-1Q6PEX3 210 aa6.25□□□□□ -1.41
SMARCA1-205ENST00000617310 IGLV5-48A0A075B6I7 105 aa6.25□□□□□ -1.41
SMARCA1-205ENST00000617310 IGLV7-46A0A075B6I9 117 aa6.25□□□□□ -1.41
SMARCA1-205ENST00000617310 Q8N1X5 172 aa6.24□□□□□ -1.41
SMARCA1-205ENST00000617310 Q5VSD8 79 aa6.23□□□□□ -1.41
SMARCA1-205ENST00000617310 PMAIP1Q13794 54 aa6.23□□□□□ -1.41
SMARCA1-205ENST00000617310 LYSTQ99698 3801 aa6.22□□□□□ -1.41
SMARCA1-205ENST00000617310 H3BPC8 53 aa6.21□□□□□ -1.41
SMARCA1-205ENST00000617310 Q6ZR54 194 aa6.19□□□□□ -1.42
SMARCA1-205ENST00000617310 SPRR1AP35321 89 aa6.18□□□□□ -1.42
SMARCA1-205ENST00000617310 Q6ZSA8 131 aa6.17□□□□□ -1.42
SMARCA1-205ENST00000617310 LINC01600Q96MT4 127 aa6.17□□□□□ -1.42
SMARCA1-205ENST00000617310 CMYA5Q8N3K9 4069 aa6.16□□□□□ -1.42
SMARCA1-205ENST00000617310 LINC01554Q52M75 96 aa6.16□□□□□ -1.42
SMARCA1-205ENST00000617310 COA5Q86WW8 74 aa6.16□□□□□ -1.42
SMARCA1-205ENST00000617310 C4orf26Q17RF5 130 aa6.14□□□□□ -1.43
SMARCA1-205ENST00000617310 RBM12B-AS1Q9P1G2 102 aa6.14□□□□□ -1.43
SMARCA1-205ENST00000617310 FAM229BQ4G0N7 80 aa6.13□□□□□ -1.43
SMARCA1-205ENST00000617310 A8MUN3 132 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms