RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 H0Y9J4 135 aa9.73□□□□□ -0.85
GPN1-212ENST00000616939 UBE2AP49459 152 aa9.73□□□□□ -0.85
GPN1-212ENST00000616939 DEFB116Q30KQ4 102 aa9.73□□□□□ -0.85
GPN1-212ENST00000616939 Q8N9P0 234 aaPredicted RBP9.72□□□□□ -0.85
GPN1-212ENST00000616939 LINC00472Q9H8W2 130 aa9.72□□□□□ -0.85
GPN1-212ENST00000616939 PRLHP81277 87 aa9.72□□□□□ -0.85
GPN1-212ENST00000616939 RPL37AP61513 92 aaKnown RBP9.71□□□□□ -0.85
GPN1-212ENST00000616939 KMT2BQ9UMN6 2715 aaPredicted RBP9.7□□□□□ -0.86
GPN1-212ENST00000616939 A0A096LNI7 61 aa9.7□□□□□ -0.86
GPN1-212ENST00000616939 ITPR2Q14571 2701 aa9.68□□□□□ -0.86
GPN1-212ENST00000616939 TENM4Q6N022 2769 aa9.67□□□□□ -0.86
GPN1-212ENST00000616939 MMP24-AS1A0A0U1RRL7 71 aa9.66□□□□□ -0.86
GPN1-212ENST00000616939 IGLV7-46A0A075B6I9 117 aa9.65□□□□□ -0.86
GPN1-212ENST00000616939 LOC101927531A0A1B0GV80 90 aa9.65□□□□□ -0.86
GPN1-212ENST00000616939 Q75L30 129 aa9.65□□□□□ -0.86
GPN1-212ENST00000616939 TENM1Q9UKZ4 2725 aa9.64□□□□□ -0.87
GPN1-212ENST00000616939 TEP1Q99973 2627 aaKnown RBP9.63□□□□□ -0.87
GPN1-212ENST00000616939 ASB16-AS1Q495Z4 193 aa9.62□□□□□ -0.87
GPN1-212ENST00000616939 NSD1Q96L73 2696 aaPredicted RBP9.61□□□□□ -0.87
GPN1-212ENST00000616939 CHKB-CPT1BH3BT56 60 aa9.61□□□□□ -0.87
GPN1-212ENST00000616939 COA5Q86WW8 74 aa9.61□□□□□ -0.87
GPN1-212ENST00000616939 PRR15LQ9BU68 103 aa9.61□□□□□ -0.87
GPN1-212ENST00000616939 TP53AIP1Q9HCN2 124 aa9.61□□□□□ -0.87
GPN1-212ENST00000616939 IGKV2-24A0A0C4DH68 120 aa9.6□□□□□ -0.87
GPN1-212ENST00000616939 PRB2P02812 416 aaPredicted RBP9.59□□□□□ -0.87
GPN1-212ENST00000616939 C14orf177Q52M58 125 aa9.59□□□□□ -0.87
GPN1-212ENST00000616939 DNAH3Q8TD57 4116 aa9.59□□□□□ -0.87
GPN1-212ENST00000616939 MOBPQ13875 183 aa9.59□□□□□ -0.88
GPN1-212ENST00000616939 FASNP49327 2511 aaKnown RBP9.58□□□□□ -0.88
GPN1-212ENST00000616939 TENM3Q9P273 2699 aa9.57□□□□□ -0.88
GPN1-212ENST00000616939 ATRQ13535 2644 aa9.57□□□□□ -0.88
GPN1-212ENST00000616939 CD164Q04900 197 aa9.56□□□□□ -0.88
GPN1-212ENST00000616939 ATP11AUNQ6ZP68 121 aa9.56□□□□□ -0.88
GPN1-212ENST00000616939 Q6ZR54 194 aa9.56□□□□□ -0.88
GPN1-212ENST00000616939 PHF5AQ7RTV0 110 aaKnown RBP9.56□□□□□ -0.88
GPN1-212ENST00000616939 KRTAP11-1Q8IUC1 163 aa9.56□□□□□ -0.88
GPN1-212ENST00000616939 PKD1L1Q8TDX9 2849 aa9.55□□□□□ -0.88
GPN1-212ENST00000616939 PLAC8Q9NZF1 115 aa9.54□□□□□ -0.88
GPN1-212ENST00000616939 A8MU10 97 aa9.54□□□□□ -0.88
GPN1-212ENST00000616939 LINC01558Q9Y6Z2 57 aa9.54□□□□□ -0.88
GPN1-212ENST00000616939 ANK2Q01484 3957 aa9.53□□□□□ -0.88
GPN1-212ENST00000616939 TRRAPQ9Y4A5 3859 aa9.53□□□□□ -0.88
GPN1-212ENST00000616939 KRTAP13-1Q8IUC0 172 aa9.53□□□□□ -0.88
GPN1-212ENST00000616939 Q96NJ1 140 aa9.53□□□□□ -0.88
GPN1-212ENST00000616939 CMYA5Q8N3K9 4069 aa9.52□□□□□ -0.89
GPN1-212ENST00000616939 KTN1-AS1Q86SY8 53 aa9.52□□□□□ -0.89
GPN1-212ENST00000616939 KRTAP1-5Q9BYS1 174 aa9.52□□□□□ -0.89
GPN1-212ENST00000616939 LCA10Q71F78 164 aa9.5□□□□□ -0.89
GPN1-212ENST00000616939 CDC42SE1Q9NRR8 79 aa9.5□□□□□ -0.89
GPN1-212ENST00000616939 C8orf17Q9NRJ1 99 aa9.49□□□□□ -0.89
GPN1-212ENST00000616939 HELZ2Q9BYK8 2649 aaKnown RBP9.48□□□□□ -0.89
GPN1-212ENST00000616939 A6NED7 52 aa9.48□□□□□ -0.89
GPN1-212ENST00000616939 NDUFS5O43920 106 aa9.48□□□□□ -0.89
GPN1-212ENST00000616939 CHTF8P0CG12 524 aa9.47□□□□□ -0.89
GPN1-212ENST00000616939 F8P00451 2351 aa9.46□□□□□ -0.9
GPN1-212ENST00000616939 A6NN06 94 aa9.45□□□□□ -0.9
GPN1-212ENST00000616939 LINC00483Q53H64 154 aa9.45□□□□□ -0.9
GPN1-212ENST00000616939 A0A1B0GVX0 72 aa9.44□□□□□ -0.9
GPN1-212ENST00000616939 KRTAP24-1Q3LI83 254 aa9.44□□□□□ -0.9
GPN1-212ENST00000616939 PCOTHQ58A44 107 aa9.44□□□□□ -0.9
GPN1-212ENST00000616939 OTOGQ6ZRI0 2925 aa9.41□□□□□ -0.9
GPN1-212ENST00000616939 SPTSSBQ8NFR3 76 aa9.4□□□□□ -0.9
GPN1-212ENST00000616939 MRPL34Q9BQ48 92 aaKnown RBP9.4□□□□□ -0.91
GPN1-212ENST00000616939 HRES1P13985 223 aa9.39□□□□□ -0.91
GPN1-212ENST00000616939 HUWE1Q7Z6Z7 4374 aaKnown RBP9.38□□□□□ -0.91
GPN1-212ENST00000616939 ZNF706Q9Y5V0 76 aaPredicted RBP9.38□□□□□ -0.91
GPN1-212ENST00000616939 UBE2DNLQ8IWF7 75 aa9.38□□□□□ -0.91
GPN1-212ENST00000616939 K7EIL1 84 aa9.37□□□□□ -0.91
GPN1-212ENST00000616939 APLNQ9ULZ1 77 aa9.36□□□□□ -0.91
GPN1-212ENST00000616939 SPAG11AQ6PDA7 123 aa9.35□□□□□ -0.91
GPN1-212ENST00000616939 IGLV9-49A0A0B4J1Y8 123 aa9.35□□□□□ -0.91
GPN1-212ENST00000616939 CDK2AP2O75956 126 aa9.35□□□□□ -0.91
GPN1-212ENST00000616939 IGHV6-1A0A0B4J1U7 121 aa9.33□□□□□ -0.92
GPN1-212ENST00000616939 C7orf65Q6ZTY9 151 aa9.33□□□□□ -0.92
GPN1-212ENST00000616939 RBM12B-AS1Q9P1G2 102 aa9.33□□□□□ -0.92
GPN1-212ENST00000616939 SPACA4Q8TDM5 124 aa9.32□□□□□ -0.92
GPN1-212ENST00000616939 WWC2-AS2Q96NR7 200 aa9.32□□□□□ -0.92
GPN1-212ENST00000616939 DNAH10Q8IVF4 4471 aa9.31□□□□□ -0.92
GPN1-212ENST00000616939 FLNBO75369 2602 aaKnown RBP9.31□□□□□ -0.92
GPN1-212ENST00000616939 PANO1I0J062 215 aa9.31□□□□□ -0.92
GPN1-212ENST00000616939 TENM2Q9NT68 2774 aa9.3□□□□□ -0.92
GPN1-212ENST00000616939 MAST4O15021 2626 aa9.3□□□□□ -0.92
GPN1-212ENST00000616939 BAHCC1Q9P281 2608 aa9.29□□□□□ -0.92
GPN1-212ENST00000616939 KRTAP13-3Q3SY46 172 aa9.29□□□□□ -0.92
GPN1-212ENST00000616939 DYNC2H1Q8NCM8 4307 aaKnown RBP9.29□□□□□ -0.92
GPN1-212ENST00000616939 SPINK7P58062 85 aa9.28□□□□□ -0.92
GPN1-212ENST00000616939 Q6ZRN7 208 aaPredicted RBP9.28□□□□□ -0.92
GPN1-212ENST00000616939 NBDYA0A0U1RRE5 68 aa9.26□□□□□ -0.93
GPN1-212ENST00000616939 DNAH9Q9NYC9 4486 aa9.25□□□□□ -0.93
GPN1-212ENST00000616939 MDFIQ99750 246 aa9.25□□□□□ -0.93
GPN1-212ENST00000616939 ALMS1Q8TCU4 4167 aa9.24□□□□□ -0.93
GPN1-212ENST00000616939 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.24□□□□□ -0.93
GPN1-212ENST00000616939 HECTD1Q9ULT8 2610 aa9.23□□□□□ -0.93
GPN1-212ENST00000616939 A0A087X002 238 aa9.22□□□□□ -0.93
GPN1-212ENST00000616939 NOTCH2NLQ7Z3S9 236 aa9.22□□□□□ -0.93
GPN1-212ENST00000616939 IGLV5-52A0A0A0MRZ9 124 aa9.21□□□□□ -0.93
GPN1-212ENST00000616939 ACYP2P14621 99 aa9.21□□□□□ -0.93
GPN1-212ENST00000616939 C8orf87E5RJ46 101 aa9.21□□□□□ -0.94
GPN1-212ENST00000616939 ZNF861PO60384 105 aa9.19□□□□□ -0.94
GPN1-212ENST00000616939 Q5W150 140 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms