RNA–Protein interactions for RNA: ENST00000613642.4

CCL16-206, Transcript of C-C motif chemokine ligand 16, humanhuman

TSL 3

Gene CCL16, Length 687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL16-206ENST00000613642 LINC00304Q8N9R0 145 aa3.29□□□□□ -1.88
CCL16-206ENST00000613642 C16orf74Q96GX8 76 aa3.29□□□□□ -1.88
CCL16-206ENST00000613642 Q96NJ1 140 aa3.29□□□□□ -1.88
CCL16-206ENST00000613642 UBR5O95071 2799 aaPredicted RBP3.29□□□□□ -1.88
CCL16-206ENST00000613642 TEX15Q9BXT5 2789 aa3.29□□□□□ -1.88
CCL16-206ENST00000613642 RP1P56715 2156 aa3.29□□□□□ -1.88
CCL16-206ENST00000613642 BOD1L1Q8NFC6 3051 aa3.28□□□□□ -1.88
CCL16-206ENST00000613642 SPTY2D1-AS1A0A0U1RR47 76 aa3.28□□□□□ -1.88
CCL16-206ENST00000613642 LCE1EQ5T753 118 aa3.28□□□□□ -1.88
CCL16-206ENST00000613642 WFDC10BQ8IUB3 73 aa3.28□□□□□ -1.88
CCL16-206ENST00000613642 DOPEY2Q9Y3R5 2298 aa3.28□□□□□ -1.88
CCL16-206ENST00000613642 MYO9AB2RTY4 2548 aa3.27□□□□□ -1.89
CCL16-206ENST00000613642 PTPN13Q12923 2485 aa3.27□□□□□ -1.89
CCL16-206ENST00000613642 IGKV2-24A0A0C4DH68 120 aa3.27□□□□□ -1.89
CCL16-206ENST00000613642 RPL37AP61513 92 aaKnown RBP3.27□□□□□ -1.89
CCL16-206ENST00000613642 KRTAP21-3Q3LHN1 58 aa3.27□□□□□ -1.89
CCL16-206ENST00000613642 MINOS1Q5TGZ0 78 aa3.27□□□□□ -1.89
CCL16-206ENST00000613642 KRTAP11-1Q8IUC1 163 aa3.27□□□□□ -1.89
CCL16-206ENST00000613642 C6orf48Q9UBA6 75 aa3.27□□□□□ -1.89
CCL16-206ENST00000613642 FAM168BA1KXE4 195 aa3.26□□□□□ -1.89
CCL16-206ENST00000613642 LY6G6CO95867 125 aa3.26□□□□□ -1.89
CCL16-206ENST00000613642 PCOTHQ58A44 107 aa3.26□□□□□ -1.89
CCL16-206ENST00000613642 C5orf56Q8N8D9 126 aa3.26□□□□□ -1.89
CCL16-206ENST00000613642 TEP1Q99973 2627 aaKnown RBP3.26□□□□□ -1.89
CCL16-206ENST00000613642 AHCTF1Q8WYP5 2266 aa3.26□□□□□ -1.89
CCL16-206ENST00000613642 MED13LQ71F56 2210 aa3.25□□□□□ -1.89
CCL16-206ENST00000613642 CREBBPQ92793 2442 aa3.25□□□□□ -1.89
CCL16-206ENST00000613642 BSNQ9UPA5 3926 aa3.24□□□□□ -1.89
CCL16-206ENST00000613642 A0A1W2PNN7 141 aa3.24□□□□□ -1.89
CCL16-206ENST00000613642 SSBP3-AS1Q7Z2R9 100 aa3.24□□□□□ -1.89
CCL16-206ENST00000613642 NBPF19A0A087WUL8 3843 aa3.23□□□□□ -1.89
CCL16-206ENST00000613642 A0A0G2JQZ4 141 aa3.23□□□□□ -1.89
CCL16-206ENST00000613642 ANKRD17O75179 2603 aaKnown RBP3.23□□□□□ -1.89
CCL16-206ENST00000613642 FBN2P35556 2912 aa3.23□□□□□ -1.89
CCL16-206ENST00000613642 DEFB131AP59861 70 aa3.23□□□□□ -1.89
CCL16-206ENST00000613642 SPTAN1Q13813 2472 aaKnown RBP3.23□□□□□ -1.89
CCL16-206ENST00000613642 DOPEY1Q5JWR5 2465 aa3.23□□□□□ -1.89
CCL16-206ENST00000613642 KNL1Q8NG31 2342 aa3.21□□□□□ -1.89
CCL16-206ENST00000613642 UTP20O75691 2785 aaKnown RBP3.21□□□□□ -1.9
CCL16-206ENST00000613642 GVQW2A0A096LPI5 108 aaPredicted RBP3.21□□□□□ -1.9
CCL16-206ENST00000613642 DEFB133Q30KQ1 61 aa3.21□□□□□ -1.9
CCL16-206ENST00000613642 Q8N377 158 aa3.21□□□□□ -1.9
CCL16-206ENST00000613642 U3KQA8 63 aa3.21□□□□□ -1.9
CCL16-206ENST00000613642 FLNCQ14315 2725 aa3.21□□□□□ -1.9
CCL16-206ENST00000613642 C2CD3Q4AC94 2353 aa3.2□□□□□ -1.9
CCL16-206ENST00000613642 NAV3Q8IVL0 2385 aa3.2□□□□□ -1.9
CCL16-206ENST00000613642 NOTCH2Q04721 2471 aa3.2□□□□□ -1.9
CCL16-206ENST00000613642 RTTNQ86VV8 2226 aa3.2□□□□□ -1.9
CCL16-206ENST00000613642 SORL1Q92673 2214 aa3.2□□□□□ -1.9
CCL16-206ENST00000613642 CRYBG3Q68DQ2 2970 aa3.2□□□□□ -1.9
CCL16-206ENST00000613642 ICE1Q9Y2F5 2266 aa3.2□□□□□ -1.9
CCL16-206ENST00000613642 IGKV2D-30A0A075B6S6 120 aa3.2□□□□□ -1.9
CCL16-206ENST00000613642 A8MTW9 85 aa3.2□□□□□ -1.9
CCL16-206ENST00000613642 DEFB116Q30KQ4 102 aa3.2□□□□□ -1.9
CCL16-206ENST00000613642 PRO2289Q9P1D8 64 aa3.2□□□□□ -1.9
CCL16-206ENST00000613642 PSORS1C2Q9UIG4 136 aa3.2□□□□□ -1.9
CCL16-206ENST00000613642 USP9YO00507 2555 aaPredicted RBP3.2□□□□□ -1.9
CCL16-206ENST00000613642 ABCA12Q86UK0 2595 aa3.2□□□□□ -1.9
CCL16-206ENST00000613642 LRRK2Q5S007 2527 aa3.19□□□□□ -1.9
CCL16-206ENST00000613642 CELSR2Q9HCU4 2923 aa3.19□□□□□ -1.9
CCL16-206ENST00000613642 DEFB109BQ30KR1 87 aa3.19□□□□□ -1.9
CCL16-206ENST00000613642 ABCA4P78363 2273 aa3.19□□□□□ -1.9
CCL16-206ENST00000613642 MMP24-AS1A0A0U1RRL7 71 aa3.18□□□□□ -1.9
CCL16-206ENST00000613642 ITPR2Q14571 2701 aa3.18□□□□□ -1.9
CCL16-206ENST00000613642 LRBAP50851 2863 aa3.18□□□□□ -1.9
CCL16-206ENST00000613642 CSMD1Q96PZ7 3565 aa3.17□□□□□ -1.9
CCL16-206ENST00000613642 SPTBN1Q01082 2364 aaKnown RBP3.17□□□□□ -1.9
CCL16-206ENST00000613642 GIG44P09565 113 aaPredicted RBP3.17□□□□□ -1.9
CCL16-206ENST00000613642 TLN1Q9Y490 2541 aaKnown RBP3.17□□□□□ -1.9
CCL16-206ENST00000613642 CNTRLQ7Z7A1 2325 aa3.16□□□□□ -1.9
CCL16-206ENST00000613642 SPENQ96T58 3664 aaKnown RBP3.16□□□□□ -1.9
CCL16-206ENST00000613642 ADGRG4Q8IZF6 3080 aa3.16□□□□□ -1.9
CCL16-206ENST00000613642 OTOGQ6ZRI0 2925 aa3.16□□□□□ -1.9
CCL16-206ENST00000613642 A0A1B0GUV1 79 aa3.16□□□□□ -1.9
CCL16-206ENST00000613642 DEFB108BQ8NET1 73 aa3.16□□□□□ -1.9
CCL16-206ENST00000613642 CELSR1Q9NYQ6 3014 aa3.15□□□□□ -1.9
CCL16-206ENST00000613642 H3BUA1 57 aa3.15□□□□□ -1.91
CCL16-206ENST00000613642 CSMD2Q7Z408 3487 aa3.15□□□□□ -1.91
CCL16-206ENST00000613642 ITPR3Q14573 2671 aa3.15□□□□□ -1.91
CCL16-206ENST00000613642 USMG5Q96IX5 58 aa3.14□□□□□ -1.91
CCL16-206ENST00000613642 MRPL34Q9BQ48 92 aaKnown RBP3.14□□□□□ -1.91
CCL16-206ENST00000613642 NBASA2RRP1 2371 aa3.14□□□□□ -1.91
CCL16-206ENST00000613642 CENPEQ02224 2701 aa3.13□□□□□ -1.91
CCL16-206ENST00000613642 SPINK13Q1W4C9 94 aa3.13□□□□□ -1.91
CCL16-206ENST00000613642 RHPN1-AS1Q9BWJ2 59 aa3.13□□□□□ -1.91
CCL16-206ENST00000613642 POLQO75417 2590 aa3.13□□□□□ -1.91
CCL16-206ENST00000613642 F8P00451 2351 aa3.12□□□□□ -1.91
CCL16-206ENST00000613642 PDZD2O15018 2839 aa3.12□□□□□ -1.91
CCL16-206ENST00000613642 CLPSL2Q6UWE3 100 aa3.12□□□□□ -1.91
CCL16-206ENST00000613642 COX6B2Q6YFQ2 88 aa3.12□□□□□ -1.91
CCL16-206ENST00000613642 DEFB105AQ8NG35 78 aa3.12□□□□□ -1.91
CCL16-206ENST00000613642 FBN3Q75N90 2809 aa3.12□□□□□ -1.91
CCL16-206ENST00000613642 PCNX1Q96RV3 2341 aa3.11□□□□□ -1.91
CCL16-206ENST00000613642 NF1P21359 2839 aa3.11□□□□□ -1.91
CCL16-206ENST00000613642 APCP25054 2843 aa3.11□□□□□ -1.91
CCL16-206ENST00000613642 G3V318 75 aa3.11□□□□□ -1.91
CCL16-206ENST00000613642 DEFB1P60022 68 aa3.11□□□□□ -1.91
CCL16-206ENST00000613642 Q6ZRX8 168 aa3.11□□□□□ -1.91
CCL16-206ENST00000613642 CRIPTQ9P021 101 aa3.11□□□□□ -1.91
CCL16-206ENST00000613642 SETD2Q9BYW2 2564 aaPredicted RBP3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms