RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 A0A1B0GX51 115 aa7.73□□□□□ -1.17
MDC1-209ENST00000613547 GHRHP01286 108 aa7.72□□□□□ -1.17
MDC1-209ENST00000613547 LINC01547P58512 204 aaPredicted RBP7.72□□□□□ -1.17
MDC1-209ENST00000613547 OCIAD2Q56VL3 154 aa7.72□□□□□ -1.17
MDC1-209ENST00000613547 PPDPFLQ8WWR9 84 aa7.72□□□□□ -1.17
MDC1-209ENST00000613547 F8WEM9 126 aa7.71□□□□□ -1.18
MDC1-209ENST00000613547 Q8N377 158 aa7.71□□□□□ -1.18
MDC1-209ENST00000613547 FAM218AQ96MZ4 157 aa7.7□□□□□ -1.18
MDC1-209ENST00000613547 DNAL4O96015 105 aa7.69□□□□□ -1.18
MDC1-209ENST00000613547 SPINK1P00995 79 aa7.69□□□□□ -1.18
MDC1-209ENST00000613547 SCGB1C2P0DMR2 95 aa7.69□□□□□ -1.18
MDC1-209ENST00000613547 BATFQ16520 125 aa7.69□□□□□ -1.18
MDC1-209ENST00000613547 SMIM29Q86T20 159 aa7.69□□□□□ -1.18
MDC1-209ENST00000613547 CLEC2BQ92478 149 aa7.69□□□□□ -1.18
MDC1-209ENST00000613547 SNHG12Q9BXW3 62 aa7.69□□□□□ -1.18
MDC1-209ENST00000613547 RPS29P62273 56 aaKnown RBP7.65□□□□□ -1.18
MDC1-209ENST00000613547 H3BQ85 93 aa7.64□□□□□ -1.19
MDC1-209ENST00000613547 TRACP01848 142 aa7.63□□□□□ -1.19
MDC1-209ENST00000613547 FABP2P12104 132 aa7.63□□□□□ -1.19
MDC1-209ENST00000613547 PRR4Q16378 134 aa7.63□□□□□ -1.19
MDC1-209ENST00000613547 LYRM7Q5U5X0 104 aa7.63□□□□□ -1.19
MDC1-209ENST00000613547 Q6JHZ5 121 aa7.63□□□□□ -1.19
MDC1-209ENST00000613547 ORMDL1Q9P0S3 153 aa7.63□□□□□ -1.19
MDC1-209ENST00000613547 LST1O00453 97 aa7.62□□□□□ -1.19
MDC1-209ENST00000613547 CD164Q04900 197 aa7.62□□□□□ -1.19
MDC1-209ENST00000613547 IGLV8-61A0A075B6I0 122 aa7.61□□□□□ -1.19
MDC1-209ENST00000613547 LIMD2Q9BT23 127 aa7.61□□□□□ -1.19
MDC1-209ENST00000613547 NDUFV3P56181 108 aaKnown RBP7.6□□□□□ -1.19
MDC1-209ENST00000613547 HRCT1Q6UXD1 115 aa7.6□□□□□ -1.19
MDC1-209ENST00000613547 NAA38Q9BRA0 125 aaKnown RBP7.6□□□□□ -1.19
MDC1-209ENST00000613547 TMEM256-PLSCR3K7ERE1 68 aa7.59□□□□□ -1.19
MDC1-209ENST00000613547 ATXN8Q156A1 80 aa7.59□□□□□ -1.19
MDC1-209ENST00000613547 RETNLBQ9BQ08 111 aa7.59□□□□□ -1.19
MDC1-209ENST00000613547 HMCN2Q8NDA2 5059 aa7.59□□□□□ -1.19
MDC1-209ENST00000613547 H3BUT2 72 aa7.57□□□□□ -1.2
MDC1-209ENST00000613547 TRBV20-1A0A075B6N2 111 aa7.56□□□□□ -1.2
MDC1-209ENST00000613547 C9orf118A6NHY6 69 aa7.56□□□□□ -1.2
MDC1-209ENST00000613547 H3BMG7 143 aa7.56□□□□□ -1.2
MDC1-209ENST00000613547 TCL1BO95988 128 aa7.56□□□□□ -1.2
MDC1-209ENST00000613547 IGFL1Q6UW32 110 aa7.56□□□□□ -1.2
MDC1-209ENST00000613547 A0A0G2JQZ4 141 aa7.55□□□□□ -1.2
MDC1-209ENST00000613547 FP248Q71RG6 208 aaPredicted RBP7.55□□□□□ -1.2
MDC1-209ENST00000613547 PCP4L1A6NKN8 68 aa7.54□□□□□ -1.2
MDC1-209ENST00000613547 TAX1BP3O14907 124 aa7.54□□□□□ -1.2
MDC1-209ENST00000613547 COL5A1-AS1Q5SY13 56 aa7.54□□□□□ -1.2
MDC1-209ENST00000613547 IGLV7-46A0A075B6I9 117 aa7.53□□□□□ -1.2
MDC1-209ENST00000613547 UBE2V1Q13404 147 aa7.53□□□□□ -1.2
MDC1-209ENST00000613547 A0A1W2PPM0 123 aa7.52□□□□□ -1.21
MDC1-209ENST00000613547 BAALC-AS2P0C853 105 aa7.52□□□□□ -1.21
MDC1-209ENST00000613547 Q5XG85 94 aa7.52□□□□□ -1.21
MDC1-209ENST00000613547 TRBV7-7A0A0K0K1E9 115 aa7.5□□□□□ -1.21
MDC1-209ENST00000613547 ANKRD29Q8N6D5 301 aa7.5□□□□□ -1.21
MDC1-209ENST00000613547 A0A1B0GV72 72 aa7.49□□□□□ -1.21
MDC1-209ENST00000613547 TEN1Q86WV5 123 aa7.49□□□□□ -1.21
MDC1-209ENST00000613547 TPRXLQ17RH7 258 aa7.48□□□□□ -1.21
MDC1-209ENST00000613547 Q6Q795 121 aa7.48□□□□□ -1.21
MDC1-209ENST00000613547 SS18L2Q9UHA2 77 aa7.48□□□□□ -1.21
MDC1-209ENST00000613547 C9JAW5 83 aa7.47□□□□□ -1.21
MDC1-209ENST00000613547 RBM3P98179 157 aaKnown RBP7.46□□□□□ -1.22
MDC1-209ENST00000613547 DSCR8Q96T75 97 aa7.46□□□□□ -1.22
MDC1-209ENST00000613547 JMJD7-PLA2G4BH0Y9G9 81 aa7.45□□□□□ -1.22
MDC1-209ENST00000613547 CDIP1Q9H305 208 aa7.44□□□□□ -1.22
MDC1-209ENST00000613547 SPCS1Q9Y6A9 102 aa7.44□□□□□ -1.22
MDC1-209ENST00000613547 ASB16-AS1Q495Z4 193 aa7.43□□□□□ -1.22
MDC1-209ENST00000613547 C1orf195Q5TG92 126 aa7.43□□□□□ -1.22
MDC1-209ENST00000613547 A0A087WSZ3 146 aa7.42□□□□□ -1.22
MDC1-209ENST00000613547 TRBV7-4A0A0J9YYF1 115 aa7.42□□□□□ -1.22
MDC1-209ENST00000613547 H3BT86 120 aa7.42□□□□□ -1.22
MDC1-209ENST00000613547 CCKP06307 115 aa7.42□□□□□ -1.22
MDC1-209ENST00000613547 A0A1W2PNM2 257 aa7.41□□□□□ -1.22
MDC1-209ENST00000613547 KRTAP13-3Q3SY46 172 aa7.4□□□□□ -1.22
MDC1-209ENST00000613547 VPS25Q9BRG1 176 aa7.4□□□□□ -1.22
MDC1-209ENST00000613547 PDE6GP18545 87 aa7.39□□□□□ -1.23
MDC1-209ENST00000613547 C21orf62-AS1Q17RA5 79 aa7.39□□□□□ -1.23
MDC1-209ENST00000613547 UBR4Q5T4S7 5183 aa7.39□□□□□ -1.23
MDC1-209ENST00000613547 LRP2P98164 4655 aa7.38□□□□□ -1.23
MDC1-209ENST00000613547 K7EP34 96 aa7.37□□□□□ -1.23
MDC1-209ENST00000613547 LOC110117498A0A087WWA1 95 aa7.36□□□□□ -1.23
MDC1-209ENST00000613547 GTF2H5Q6ZYL4 71 aa7.36□□□□□ -1.23
MDC1-209ENST00000613547 MTURNQ8N3F0 131 aa7.36□□□□□ -1.23
MDC1-209ENST00000613547 C14orf132Q9NPU4 83 aa7.35□□□□□ -1.23
MDC1-209ENST00000613547 Q6ZQT0 140 aa7.34□□□□□ -1.23
MDC1-209ENST00000613547 A0A1B0GW54 56 aa7.33□□□□□ -1.24
MDC1-209ENST00000613547 OBSCN-AS1Q96MR7 158 aa7.33□□□□□ -1.24
MDC1-209ENST00000613547 LPAP08519 4548 aa7.32□□□□□ -1.24
MDC1-209ENST00000613547 C9orf92A6NGG3 77 aa7.32□□□□□ -1.24
MDC1-209ENST00000613547 LCE2AQ5TA79 106 aaPredicted RBP7.31□□□□□ -1.24
MDC1-209ENST00000613547 LCE2CQ5TA81 110 aa7.31□□□□□ -1.24
MDC1-209ENST00000613547 SIGMAR1Q99720 223 aa7.3□□□□□ -1.24
MDC1-209ENST00000613547 XP32Q5T750 250 aa7.28□□□□□ -1.24
MDC1-209ENST00000613547 Q96NJ1 140 aa7.28□□□□□ -1.24
MDC1-209ENST00000613547 IGKV4-1P06312 121 aa7.27□□□□□ -1.25
MDC1-209ENST00000613547 PRO0461Q9UI25 63 aa7.27□□□□□ -1.25
MDC1-209ENST00000613547 F8W1H4 67 aa7.26□□□□□ -1.25
MDC1-209ENST00000613547 SEC61BP60468 96 aaKnown RBP7.26□□□□□ -1.25
MDC1-209ENST00000613547 LINC00472Q9H8W2 130 aa7.26□□□□□ -1.25
MDC1-209ENST00000613547 J3KT08 172 aa7.24□□□□□ -1.25
MDC1-209ENST00000613547 DEFB116Q30KQ4 102 aa7.24□□□□□ -1.25
MDC1-209ENST00000613547 NREPQ16612 68 aa7.22□□□□□ -1.25
MDC1-209ENST00000613547 NDUFB1O75438 58 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms