RNA–Protein interactions for RNA: ENST00000613228.1

PDE6A-204, Transcript of phosphodiesterase 6A, humanhuman

TSL 5 BASIC

Gene PDE6A, Length 5,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-204ENST00000613228 FLNAP21333 2647 aaKnown RBP5.34□□□□□ -1.55
PDE6A-204ENST00000613228 SPTBN5Q9NRC6 3674 aaKnown RBP5.34□□□□□ -1.56
PDE6A-204ENST00000613228 SPATA8Q6RVD6 105 aa5.33□□□□□ -1.56
PDE6A-204ENST00000613228 CDH23Q9H251 3354 aa5.33□□□□□ -1.56
PDE6A-204ENST00000613228 MTORP42345 2549 aa5.33□□□□□ -1.56
PDE6A-204ENST00000613228 A8MU10 97 aa5.32□□□□□ -1.56
PDE6A-204ENST00000613228 JMJD1CQ15652 2540 aa5.31□□□□□ -1.56
PDE6A-204ENST00000613228 LUZP6Q538Z0 58 aa5.3□□□□□ -1.56
PDE6A-204ENST00000613228 MMP24-AS1A0A0U1RRL7 71 aa5.3□□□□□ -1.56
PDE6A-204ENST00000613228 ITPR3Q14573 2671 aa5.29□□□□□ -1.56
PDE6A-204ENST00000613228 IGSF10Q6WRI0 2623 aa5.29□□□□□ -1.56
PDE6A-204ENST00000613228 KRTAP25-1Q3LHN0 102 aa5.29□□□□□ -1.56
PDE6A-204ENST00000613228 A0A0G2JQZ4 141 aa5.29□□□□□ -1.56
PDE6A-204ENST00000613228 ANAPC11Q9NYG5 84 aa5.28□□□□□ -1.56
PDE6A-204ENST00000613228 Q6ZRN7 208 aaPredicted RBP5.28□□□□□ -1.56
PDE6A-204ENST00000613228 LINC00472Q9H8W2 130 aa5.27□□□□□ -1.57
PDE6A-204ENST00000613228 ADM2Q7Z4H4 148 aa5.27□□□□□ -1.57
PDE6A-204ENST00000613228 SZT2Q5T011 3432 aa5.27□□□□□ -1.57
PDE6A-204ENST00000613228 ROMO1P60602 79 aa5.25□□□□□ -1.57
PDE6A-204ENST00000613228 A0A1B0GU33 70 aa5.25□□□□□ -1.57
PDE6A-204ENST00000613228 HECTD1Q9ULT8 2610 aa5.25□□□□□ -1.57
PDE6A-204ENST00000613228 HELZ2Q9BYK8 2649 aaKnown RBP5.24□□□□□ -1.57
PDE6A-204ENST00000613228 MGAQ8IWI9 3026 aa5.24□□□□□ -1.57
PDE6A-204ENST00000613228 SMR3BP02814 79 aaPredicted RBP5.24□□□□□ -1.57
PDE6A-204ENST00000613228 KRTAP29-1A8MX34 341 aaPredicted RBP5.23□□□□□ -1.57
PDE6A-204ENST00000613228 J3QL48 77 aa5.22□□□□□ -1.57
PDE6A-204ENST00000613228 XIRP2A4UGR9 3374 aa5.22□□□□□ -1.57
PDE6A-204ENST00000613228 PRRC2CQ9Y520 2896 aaKnown RBP5.21□□□□□ -1.57
PDE6A-204ENST00000613228 KRTAP10-1P60331 282 aa5.21□□□□□ -1.58
PDE6A-204ENST00000613228 RPS29P62273 56 aaKnown RBP5.2□□□□□ -1.58
PDE6A-204ENST00000613228 UNC80Q8N2C7 3258 aa5.19□□□□□ -1.58
PDE6A-204ENST00000613228 KRTAP10-2P60368 255 aa5.19□□□□□ -1.58
PDE6A-204ENST00000613228 KRTAP13-1Q8IUC0 172 aa5.17□□□□□ -1.58
PDE6A-204ENST00000613228 C9orf92A6NGG3 77 aa5.17□□□□□ -1.58
PDE6A-204ENST00000613228 KRTAP7-1Q8IUC3 87 aa5.17□□□□□ -1.58
PDE6A-204ENST00000613228 UNC79Q9P2D8 2635 aa5.17□□□□□ -1.58
PDE6A-204ENST00000613228 SETD2Q9BYW2 2564 aaPredicted RBP5.17□□□□□ -1.58
PDE6A-204ENST00000613228 SEC61BP60468 96 aaKnown RBP5.17□□□□□ -1.58
PDE6A-204ENST00000613228 REV3LO60673 3130 aa5.16□□□□□ -1.58
PDE6A-204ENST00000613228 KMT2BQ9UMN6 2715 aaPredicted RBP5.16□□□□□ -1.58
PDE6A-204ENST00000613228 PANO1I0J062 215 aa5.15□□□□□ -1.58
PDE6A-204ENST00000613228 UBR5O95071 2799 aaPredicted RBP5.14□□□□□ -1.59
PDE6A-204ENST00000613228 PRUNE2Q8WUY3 3088 aa5.14□□□□□ -1.59
PDE6A-204ENST00000613228 CFAP46Q8IYW2 2715 aa5.14□□□□□ -1.59
PDE6A-204ENST00000613228 NDUFAF8A1L188 74 aa5.13□□□□□ -1.59
PDE6A-204ENST00000613228 TRIOO75962 3097 aa5.11□□□□□ -1.59
PDE6A-204ENST00000613228 Q8N1X5 172 aa5.11□□□□□ -1.59
PDE6A-204ENST00000613228 FLNBO75369 2602 aaKnown RBP5.11□□□□□ -1.59
PDE6A-204ENST00000613228 Q5W150 140 aa5.1□□□□□ -1.59
PDE6A-204ENST00000613228 A0A0D9SG42 100 aa5.1□□□□□ -1.59
PDE6A-204ENST00000613228 BAHCC1Q9P281 2608 aa5.09□□□□□ -1.6
PDE6A-204ENST00000613228 Q5VSD8 79 aa5.09□□□□□ -1.6
PDE6A-204ENST00000613228 H1FX-AS1Q4G0G2 97 aa5.08□□□□□ -1.6
PDE6A-204ENST00000613228 NOTCH2NLQ7Z3S9 236 aa5.08□□□□□ -1.6
PDE6A-204ENST00000613228 KRTAP11-1Q8IUC1 163 aa5.08□□□□□ -1.6
PDE6A-204ENST00000613228 LAMA2P24043 3122 aaKnown RBP5.07□□□□□ -1.6
PDE6A-204ENST00000613228 LAMA1P25391 3075 aa5.07□□□□□ -1.6
PDE6A-204ENST00000613228 DNAH14Q0VDD8 3507 aa5.07□□□□□ -1.6
PDE6A-204ENST00000613228 DSPP15924 2871 aaKnown RBP5.06□□□□□ -1.6
PDE6A-204ENST00000613228 A8MUU9 505 aa5.06□□□□□ -1.6
PDE6A-204ENST00000613228 ATRQ13535 2644 aa5.06□□□□□ -1.6
PDE6A-204ENST00000613228 WDFY4Q6ZS81 3184 aa5.05□□□□□ -1.6
PDE6A-204ENST00000613228 RPL37P61927 97 aaKnown RBP5.05□□□□□ -1.6
PDE6A-204ENST00000613228 CAMK2N1Q7Z7J9 78 aa5.05□□□□□ -1.6
PDE6A-204ENST00000613228 EYSQ5T1H1 3165 aa5.04□□□□□ -1.6
PDE6A-204ENST00000613228 Q6ZSA8 131 aa5.03□□□□□ -1.6
PDE6A-204ENST00000613228 C20orf166-AS1Q96NR2 134 aa5.03□□□□□ -1.6
PDE6A-204ENST00000613228 VCANP13611 3396 aa5.01□□□□□ -1.61
PDE6A-204ENST00000613228 A0A0C4DFX4 3053 aa5.01□□□□□ -1.61
PDE6A-204ENST00000613228 TEX15Q9BXT5 2789 aa5.01□□□□□ -1.61
PDE6A-204ENST00000613228 HRNRQ86YZ3 2850 aaPredicted RBP5.01□□□□□ -1.61
PDE6A-204ENST00000613228 USP34Q70CQ2 3546 aa4.99□□□□□ -1.61
PDE6A-204ENST00000613228 COX6B2Q6YFQ2 88 aa4.99□□□□□ -1.61
PDE6A-204ENST00000613228 TEP1Q99973 2627 aaKnown RBP4.99□□□□□ -1.61
PDE6A-204ENST00000613228 VPS13AQ96RL7 3174 aa4.98□□□□□ -1.61
PDE6A-204ENST00000613228 SETXQ7Z333 2677 aaKnown RBP4.98□□□□□ -1.61
PDE6A-204ENST00000613228 KRTAP13-2Q52LG2 175 aa4.97□□□□□ -1.61
PDE6A-204ENST00000613228 APCP25054 2843 aa4.96□□□□□ -1.62
PDE6A-204ENST00000613228 UTP20O75691 2785 aaKnown RBP4.96□□□□□ -1.62
PDE6A-204ENST00000613228 CHD6Q8TD26 2715 aa4.96□□□□□ -1.62
PDE6A-204ENST00000613228 COL6A3P12111 3177 aa4.95□□□□□ -1.62
PDE6A-204ENST00000613228 S4R3F8 94 aa4.94□□□□□ -1.62
PDE6A-204ENST00000613228 CFAP54Q96N23 3096 aa4.94□□□□□ -1.62
PDE6A-204ENST00000613228 MAST4O15021 2626 aa4.93□□□□□ -1.62
PDE6A-204ENST00000613228 DMXL2Q8TDJ6 3036 aa4.93□□□□□ -1.62
PDE6A-204ENST00000613228 FLNCQ14315 2725 aa4.92□□□□□ -1.62
PDE6A-204ENST00000613228 DMXL1Q9Y485 3027 aa4.91□□□□□ -1.62
PDE6A-204ENST00000613228 FRYQ5TBA9 3013 aa4.91□□□□□ -1.62
PDE6A-204ENST00000613228 ITPR1Q14643 2758 aa4.9□□□□□ -1.62
PDE6A-204ENST00000613228 ANK3Q12955 4377 aaKnown RBP4.9□□□□□ -1.63
PDE6A-204ENST00000613228 ITPR2Q14571 2701 aa4.9□□□□□ -1.63
PDE6A-204ENST00000613228 ATMQ13315 3056 aa4.89□□□□□ -1.63
PDE6A-204ENST00000613228 LRBAP50851 2863 aa4.88□□□□□ -1.63
PDE6A-204ENST00000613228 HIVEP1P15822 2718 aa4.87□□□□□ -1.63
PDE6A-204ENST00000613228 KRTAP1-4P0C5Y4 121 aa4.87□□□□□ -1.63
PDE6A-204ENST00000613228 NSD1Q96L73 2696 aaPredicted RBP4.87□□□□□ -1.63
PDE6A-204ENST00000613228 CENPEQ02224 2701 aa4.86□□□□□ -1.63
PDE6A-204ENST00000613228 ADGRG4Q8IZF6 3080 aa4.85□□□□□ -1.63
PDE6A-204ENST00000613228 FRYLO94915 3013 aa4.85□□□□□ -1.63
PDE6A-204ENST00000613228 FREM2Q5SZK8 3169 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms