RNA–Protein interactions for RNA: ENST00000611067.4

SEMA3B-210, Transcript of semaphorin 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-210ENST00000611067 PRKDCP78527 4128 aaKnown RBP12.16□□□□□ -0.46
SEMA3B-210ENST00000611067 FAM168BA1KXE4 195 aa12.16□□□□□ -0.46
SEMA3B-210ENST00000611067 HCG22E2RYF7 251 aa12.14□□□□□ -0.47
SEMA3B-210ENST00000611067 CYP4F30PQ9H0H9 118 aa12.14□□□□□ -0.47
SEMA3B-210ENST00000611067 LRCOL1A6NCL2 159 aa12.13□□□□□ -0.47
SEMA3B-210ENST00000611067 KRTAP7-1Q8IUC3 87 aa12.12□□□□□ -0.47
SEMA3B-210ENST00000611067 UBE2BP63146 152 aa12.09□□□□□ -0.47
SEMA3B-210ENST00000611067 PSCAO43653 123 aa12.09□□□□□ -0.47
SEMA3B-210ENST00000611067 MRPL55Q7Z7F7 128 aaKnown RBP12.09□□□□□ -0.47
SEMA3B-210ENST00000611067 PRR15Q8IV56 129 aa12.08□□□□□ -0.48
SEMA3B-210ENST00000611067 LINC00476Q8WZB0 136 aa12.08□□□□□ -0.48
SEMA3B-210ENST00000611067 NDUFB1O75438 58 aa12.07□□□□□ -0.48
SEMA3B-210ENST00000611067 CSMD3Q7Z407 3707 aa12.07□□□□□ -0.48
SEMA3B-210ENST00000611067 V9GYY9 64 aa12.07□□□□□ -0.48
SEMA3B-210ENST00000611067 DYNC2H1Q8NCM8 4307 aaKnown RBP12.06□□□□□ -0.48
SEMA3B-210ENST00000611067 KRTAP1-5Q9BYS1 174 aa12.05□□□□□ -0.48
SEMA3B-210ENST00000611067 LYSTQ99698 3801 aa12.04□□□□□ -0.48
SEMA3B-210ENST00000611067 CASC10Q5T4H9 136 aa12.04□□□□□ -0.48
SEMA3B-210ENST00000611067 REG3GQ6UW15 175 aa12.03□□□□□ -0.48
SEMA3B-210ENST00000611067 TRAV22A0A0B4J277 110 aa12.03□□□□□ -0.48
SEMA3B-210ENST00000611067 IGFL1Q6UW32 110 aa12.03□□□□□ -0.48
SEMA3B-210ENST00000611067 PRR4Q16378 134 aa12.02□□□□□ -0.49
SEMA3B-210ENST00000611067 MP68P56378 58 aa12.01□□□□□ -0.49
SEMA3B-210ENST00000611067 DNAH7Q8WXX0 4024 aa12□□□□□ -0.49
SEMA3B-210ENST00000611067 PSPHP1O15172 72 aa11.99□□□□□ -0.49
SEMA3B-210ENST00000611067 WFDC13Q8IUB5 93 aa11.99□□□□□ -0.49
SEMA3B-210ENST00000611067 TENM2Q9NT68 2774 aa11.99□□□□□ -0.49
SEMA3B-210ENST00000611067 A0A0G2JQZ4 141 aa11.99□□□□□ -0.49
SEMA3B-210ENST00000611067 A0A1W2PNN7 141 aa11.99□□□□□ -0.49
SEMA3B-210ENST00000611067 DEFB116Q30KQ4 102 aa11.98□□□□□ -0.49
SEMA3B-210ENST00000611067 DNAH1Q9P2D7 4330 aa11.98□□□□□ -0.49
SEMA3B-210ENST00000611067 IGLV8-61A0A075B6I0 122 aa11.97□□□□□ -0.49
SEMA3B-210ENST00000611067 NBDYA0A0U1RRE5 68 aa11.97□□□□□ -0.49
SEMA3B-210ENST00000611067 FBN3Q75N90 2809 aa11.97□□□□□ -0.49
SEMA3B-210ENST00000611067 PLECQ15149 4684 aaKnown RBP11.96□□□□□ -0.49
SEMA3B-210ENST00000611067 A0A087WSZ3 146 aa11.96□□□□□ -0.49
SEMA3B-210ENST00000611067 KRTAP29-1A8MX34 341 aaPredicted RBP11.94□□□□□ -0.5
SEMA3B-210ENST00000611067 LINC00208Q96KT6 92 aa11.94□□□□□ -0.5
SEMA3B-210ENST00000611067 STARD9Q9P2P6 4700 aa11.94□□□□□ -0.5
SEMA3B-210ENST00000611067 SPANXA2-OT1Q8N9U9 137 aa11.92□□□□□ -0.5
SEMA3B-210ENST00000611067 H3BPC8 53 aa11.91□□□□□ -0.5
SEMA3B-210ENST00000611067 A8MUN3 132 aa11.9□□□□□ -0.5
SEMA3B-210ENST00000611067 SEC61GP60059 68 aa11.9□□□□□ -0.5
SEMA3B-210ENST00000611067 RPL37AP61513 92 aaKnown RBP11.9□□□□□ -0.5
SEMA3B-210ENST00000611067 PMAIP1Q13794 54 aa11.89□□□□□ -0.51
SEMA3B-210ENST00000611067 PRLHP81277 87 aa11.89□□□□□ -0.51
SEMA3B-210ENST00000611067 C14orf177Q52M58 125 aa11.89□□□□□ -0.51
SEMA3B-210ENST00000611067 H0Y9P7 68 aa11.88□□□□□ -0.51
SEMA3B-210ENST00000611067 CASC2Q6XLA1 102 aa11.87□□□□□ -0.51
SEMA3B-210ENST00000611067 WWC2-AS2Q96NR7 200 aa11.86□□□□□ -0.51
SEMA3B-210ENST00000611067 Q5VV11 94 aa11.85□□□□□ -0.51
SEMA3B-210ENST00000611067 UBE2AP49459 152 aa11.84□□□□□ -0.51
SEMA3B-210ENST00000611067 CNBPP62633 177 aaKnown RBP11.84□□□□□ -0.51
SEMA3B-210ENST00000611067 TGP01266 2768 aa11.82□□□□□ -0.52
SEMA3B-210ENST00000611067 A8MWP4 228 aa11.81□□□□□ -0.52
SEMA3B-210ENST00000611067 Q6ZRN7 208 aaPredicted RBP11.81□□□□□ -0.52
SEMA3B-210ENST00000611067 Q8N9P0 234 aaPredicted RBP11.81□□□□□ -0.52
SEMA3B-210ENST00000611067 DNAH10Q8IVF4 4471 aa11.81□□□□□ -0.52
SEMA3B-210ENST00000611067 A0A096LNI7 61 aa11.81□□□□□ -0.52
SEMA3B-210ENST00000611067 C16orf90A8MZG2 172 aa11.81□□□□□ -0.52
SEMA3B-210ENST00000611067 LIMD2Q9BT23 127 aa11.81□□□□□ -0.52
SEMA3B-210ENST00000611067 C9orf163Q8N9P6 203 aa11.79□□□□□ -0.52
SEMA3B-210ENST00000611067 LINC00472Q9H8W2 130 aa11.79□□□□□ -0.52
SEMA3B-210ENST00000611067 VPS13DQ5THJ4 4388 aa11.79□□□□□ -0.52
SEMA3B-210ENST00000611067 LY6G6CO95867 125 aa11.78□□□□□ -0.52
SEMA3B-210ENST00000611067 IGKV2-24A0A0C4DH68 120 aa11.77□□□□□ -0.52
SEMA3B-210ENST00000611067 SPRR1BP22528 89 aa11.77□□□□□ -0.52
SEMA3B-210ENST00000611067 Q6ZR54 194 aa11.76□□□□□ -0.53
SEMA3B-210ENST00000611067 A8MU10 97 aa11.74□□□□□ -0.53
SEMA3B-210ENST00000611067 CHKB-CPT1BH3BT56 60 aa11.73□□□□□ -0.53
SEMA3B-210ENST00000611067 H0Y9J4 135 aa11.72□□□□□ -0.53
SEMA3B-210ENST00000611067 PRR15LQ9BU68 103 aa11.71□□□□□ -0.54
SEMA3B-210ENST00000611067 MMP24-AS1A0A0U1RRL7 71 aa11.7□□□□□ -0.54
SEMA3B-210ENST00000611067 C1orf134Q5TEV5 83 aa11.7□□□□□ -0.54
SEMA3B-210ENST00000611067 IGLV7-46A0A075B6I9 117 aa11.69□□□□□ -0.54
SEMA3B-210ENST00000611067 A0A087WTM6 91 aa11.69□□□□□ -0.54
SEMA3B-210ENST00000611067 KRTAP11-1Q8IUC1 163 aa11.69□□□□□ -0.54
SEMA3B-210ENST00000611067 COA5Q86WW8 74 aa11.67□□□□□ -0.54
SEMA3B-210ENST00000611067 KMT2AQ03164 3969 aa11.67□□□□□ -0.54
SEMA3B-210ENST00000611067 PHF5AQ7RTV0 110 aaKnown RBP11.67□□□□□ -0.54
SEMA3B-210ENST00000611067 Q75L30 129 aa11.66□□□□□ -0.54
SEMA3B-210ENST00000611067 LOC101927531A0A1B0GV80 90 aa11.65□□□□□ -0.54
SEMA3B-210ENST00000611067 CHTF8P0CG12 524 aa11.62□□□□□ -0.55
SEMA3B-210ENST00000611067 TP53AIP1Q9HCN2 124 aa11.6□□□□□ -0.55
SEMA3B-210ENST00000611067 ASB16-AS1Q495Z4 193 aa11.59□□□□□ -0.55
SEMA3B-210ENST00000611067 LCA10Q71F78 164 aa11.58□□□□□ -0.55
SEMA3B-210ENST00000611067 RTL8CO15255 209 aa11.57□□□□□ -0.56
SEMA3B-210ENST00000611067 ATP11AUNQ6ZP68 121 aa11.57□□□□□ -0.56
SEMA3B-210ENST00000611067 A6NED7 52 aa11.57□□□□□ -0.56
SEMA3B-210ENST00000611067 CD164Q04900 197 aa11.57□□□□□ -0.56
SEMA3B-210ENST00000611067 PCOTHQ58A44 107 aa11.57□□□□□ -0.56
SEMA3B-210ENST00000611067 MOBPQ13875 183 aa11.56□□□□□ -0.56
SEMA3B-210ENST00000611067 Q96NJ1 140 aa11.56□□□□□ -0.56
SEMA3B-210ENST00000611067 DNAH2Q9P225 4427 aa11.55□□□□□ -0.56
SEMA3B-210ENST00000611067 SRRM2Q9UQ35 2752 aaKnown RBP11.55□□□□□ -0.56
SEMA3B-210ENST00000611067 ALMS1Q8TCU4 4167 aa11.55□□□□□ -0.56
SEMA3B-210ENST00000611067 KTN1-AS1Q86SY8 53 aa11.54□□□□□ -0.56
SEMA3B-210ENST00000611067 SPTSSBQ8NFR3 76 aa11.53□□□□□ -0.56
SEMA3B-210ENST00000611067 IGLV5-52A0A0A0MRZ9 124 aa11.53□□□□□ -0.56
SEMA3B-210ENST00000611067 DNAH6Q9C0G6 4158 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms