RNA–Protein interactions for RNA: ENST00000608568.1

SSX9-202, Transcript of Protein SSX9, humanhuman

TSL 4 BASIC

Gene SSX9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9-202ENST00000608568 PCLOQ9Y6V0 5065 aa3.43□□□□□ -1.86
SSX9-202ENST00000608568 DNAH5Q8TE73 4624 aa3.42□□□□□ -1.86
SSX9-202ENST00000608568 INSP01308 110 aa3.42□□□□□ -1.86
SSX9-202ENST00000608568 DEFB1P60022 68 aa3.42□□□□□ -1.86
SSX9-202ENST00000608568 SEC61BP60468 96 aaKnown RBP3.42□□□□□ -1.86
SSX9-202ENST00000608568 C7orf65Q6ZTY9 151 aa3.42□□□□□ -1.86
SSX9-202ENST00000608568 LCA10Q71F78 164 aa3.42□□□□□ -1.86
SSX9-202ENST00000608568 Q75L30 129 aa3.42□□□□□ -1.86
SSX9-202ENST00000608568 DIRC1Q969H9 104 aa3.42□□□□□ -1.86
SSX9-202ENST00000608568 CELA1Q9UNI1 258 aa3.42□□□□□ -1.86
SSX9-202ENST00000608568 ABCA13Q86UQ4 5058 aa3.41□□□□□ -1.86
SSX9-202ENST00000608568 APOBP04114 4563 aaKnown RBP3.41□□□□□ -1.86
SSX9-202ENST00000608568 LOC101927531A0A1B0GV80 90 aa3.41□□□□□ -1.86
SSX9-202ENST00000608568 ETDCA0A1B0GVM5 59 aa3.41□□□□□ -1.86
SSX9-202ENST00000608568 ZNF73O43830 326 aaPredicted RBP3.41□□□□□ -1.86
SSX9-202ENST00000608568 APOC4P55056 127 aa3.41□□□□□ -1.86
SSX9-202ENST00000608568 C6orf99Q4VX62 202 aa3.41□□□□□ -1.86
SSX9-202ENST00000608568 TOMM7Q9P0U1 55 aa3.41□□□□□ -1.86
SSX9-202ENST00000608568 LRP1BQ9NZR2 4599 aa3.41□□□□□ -1.86
SSX9-202ENST00000608568 TRGV2A0A075B6R0 118 aa3.4□□□□□ -1.87
SSX9-202ENST00000608568 IGHV3-73A0A0B4J1V6 119 aa3.4□□□□□ -1.87
SSX9-202ENST00000608568 A0A1B0GUV1 79 aa3.4□□□□□ -1.87
SSX9-202ENST00000608568 A6NN06 94 aa3.4□□□□□ -1.87
SSX9-202ENST00000608568 IGLV6-57P01721 117 aa3.4□□□□□ -1.87
SSX9-202ENST00000608568 HIGD2BQ4VC39 106 aa3.4□□□□□ -1.87
SSX9-202ENST00000608568 Q5VV11 94 aa3.4□□□□□ -1.87
SSX9-202ENST00000608568 HIGD2AQ9BW72 106 aa3.4□□□□□ -1.87
SSX9-202ENST00000608568 IGKV3-7A0A075B6H7 116 aa3.39□□□□□ -1.87
SSX9-202ENST00000608568 CDC42SE1Q9NRR8 79 aa3.39□□□□□ -1.87
SSX9-202ENST00000608568 LINC00959A0A1B0GUT2 108 aa3.38□□□□□ -1.87
SSX9-202ENST00000608568 CHKB-CPT1BH3BT56 60 aa3.38□□□□□ -1.87
SSX9-202ENST00000608568 PSPHP1O15172 72 aa3.38□□□□□ -1.87
SSX9-202ENST00000608568 ODF3L2Q3SX64 289 aa3.38□□□□□ -1.87
SSX9-202ENST00000608568 Q6ZQY7 126 aa3.38□□□□□ -1.87
SSX9-202ENST00000608568 A0A0J9YWU9 116 aa3.37□□□□□ -1.87
SSX9-202ENST00000608568 KRTAP9-7A8MTY7 169 aa3.37□□□□□ -1.87
SSX9-202ENST00000608568 A8MUN3 132 aa3.37□□□□□ -1.87
SSX9-202ENST00000608568 C16orf90A8MZG2 172 aa3.37□□□□□ -1.87
SSX9-202ENST00000608568 HCG22E2RYF7 251 aa3.37□□□□□ -1.87
SSX9-202ENST00000608568 IGKV3-20P01619 116 aa3.37□□□□□ -1.87
SSX9-202ENST00000608568 CMC4P56277 68 aaPredicted RBP3.37□□□□□ -1.87
SSX9-202ENST00000608568 MP68P56378 58 aa3.37□□□□□ -1.87
SSX9-202ENST00000608568 DEFB135Q30KP9 77 aa3.37□□□□□ -1.87
SSX9-202ENST00000608568 KRTAP19-4Q3LI73 84 aa3.37□□□□□ -1.87
SSX9-202ENST00000608568 Q8N9P0 234 aaPredicted RBP3.37□□□□□ -1.87
SSX9-202ENST00000608568 NKAPP1Q8N9T2 125 aa3.37□□□□□ -1.87
SSX9-202ENST00000608568 KCNQ1DNQ9H478 68 aa3.37□□□□□ -1.87
SSX9-202ENST00000608568 GVQW2A0A096LPI5 108 aaPredicted RBP3.36□□□□□ -1.87
SSX9-202ENST00000608568 C8orf87E5RJ46 101 aa3.36□□□□□ -1.87
SSX9-202ENST00000608568 M0R2N4 97 aa3.36□□□□□ -1.87
SSX9-202ENST00000608568 LINC00208Q96KT6 92 aa3.36□□□□□ -1.87
SSX9-202ENST00000608568 IGLV4-60A0A075B6I1 120 aa3.35□□□□□ -1.87
SSX9-202ENST00000608568 IGLV5-48A0A075B6I7 105 aa3.35□□□□□ -1.87
SSX9-202ENST00000608568 TRGV1A0A0A0MS02 117 aa3.35□□□□□ -1.87
SSX9-202ENST00000608568 DEFB131AP59861 70 aa3.35□□□□□ -1.87
SSX9-202ENST00000608568 KIAA0087Q14695 138 aa3.35□□□□□ -1.87
SSX9-202ENST00000608568 C16orf74Q96GX8 76 aa3.35□□□□□ -1.87
SSX9-202ENST00000608568 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.34□□□□□ -1.87
SSX9-202ENST00000608568 A6NED7 52 aa3.34□□□□□ -1.87
SSX9-202ENST00000608568 DEFB4AO15263 64 aa3.34□□□□□ -1.87
SSX9-202ENST00000608568 HTN1P15515 57 aa3.34□□□□□ -1.87
SSX9-202ENST00000608568 SCXQ7RTU7 201 aa3.34□□□□□ -1.87
SSX9-202ENST00000608568 SMIM29Q86T20 159 aa3.34□□□□□ -1.87
SSX9-202ENST00000608568 TRGV4A0A0C4DH28 118 aa3.33□□□□□ -1.88
SSX9-202ENST00000608568 LY6G6CO95867 125 aa3.33□□□□□ -1.88
SSX9-202ENST00000608568 GIG44P09565 113 aaPredicted RBP3.33□□□□□ -1.88
SSX9-202ENST00000608568 C9orf116Q5BN46 136 aaPredicted RBP3.33□□□□□ -1.88
SSX9-202ENST00000608568 LINC01558Q9Y6Z2 57 aa3.33□□□□□ -1.88
SSX9-202ENST00000608568 VPS13BQ7Z7G8 4022 aa3.32□□□□□ -1.88
SSX9-202ENST00000608568 C10orf25Q5T742 122 aa3.32□□□□□ -1.88
SSX9-202ENST00000608568 SPTSSBQ8NFR3 76 aa3.32□□□□□ -1.88
SSX9-202ENST00000608568 C11orf45Q8TAV5 145 aa3.32□□□□□ -1.88
SSX9-202ENST00000608568 SPRR4Q96PI1 79 aa3.32□□□□□ -1.88
SSX9-202ENST00000608568 PRR15LQ9BU68 103 aa3.32□□□□□ -1.88
SSX9-202ENST00000608568 FAT1Q14517 4588 aa3.32□□□□□ -1.88
SSX9-202ENST00000608568 PRM2P04554 102 aa3.31□□□□□ -1.88
SSX9-202ENST00000608568 CASC2Q6XLA1 102 aa3.31□□□□□ -1.88
SSX9-202ENST00000608568 LINC00612Q8N6U2 182 aa3.31□□□□□ -1.88
SSX9-202ENST00000608568 Q8NAQ8 132 aa3.31□□□□□ -1.88
SSX9-202ENST00000608568 KRTAP3-1Q9BYR8 98 aa3.31□□□□□ -1.88
SSX9-202ENST00000608568 LRCOL1A6NCL2 159 aa3.3□□□□□ -1.88
SSX9-202ENST00000608568 NUPR2A6NF83 97 aa3.3□□□□□ -1.88
SSX9-202ENST00000608568 CNBPP62633 177 aaKnown RBP3.3□□□□□ -1.88
SSX9-202ENST00000608568 PRR3P79522 188 aaKnown RBP3.3□□□□□ -1.88
SSX9-202ENST00000608568 Q8NBF4 154 aa3.3□□□□□ -1.88
SSX9-202ENST00000608568 PLAC8Q9NZF1 115 aa3.3□□□□□ -1.88
SSX9-202ENST00000608568 DNAH8Q96JB1 4490 aa3.3□□□□□ -1.88
SSX9-202ENST00000608568 HERC1Q15751 4861 aa3.29□□□□□ -1.88
SSX9-202ENST00000608568 IGLV7-46A0A075B6I9 117 aa3.29□□□□□ -1.88
SSX9-202ENST00000608568 IGKV3OR2-268A0A0C4DH90 116 aa3.29□□□□□ -1.88
SSX9-202ENST00000608568 LINC01554Q52M75 96 aa3.29□□□□□ -1.88
SSX9-202ENST00000608568 Q8N9L7 120 aa3.29□□□□□ -1.88
SSX9-202ENST00000608568 DHRS4-AS1Q9P1J3 65 aa3.29□□□□□ -1.88
SSX9-202ENST00000608568 SPAG11BQ08648 103 aa3.28□□□□□ -1.88
SSX9-202ENST00000608568 MOBPQ13875 183 aa3.28□□□□□ -1.88
SSX9-202ENST00000608568 C9orf163Q8N9P6 203 aa3.28□□□□□ -1.88
SSX9-202ENST00000608568 CSNK1G2-AS1Q8NCQ2 148 aa3.28□□□□□ -1.88
SSX9-202ENST00000608568 CHCHD10Q8WYQ3 142 aaPredicted RBP3.28□□□□□ -1.88
SSX9-202ENST00000608568 KRTAP9-3Q9BYQ3 159 aa3.28□□□□□ -1.88
SSX9-202ENST00000608568 APLNQ9ULZ1 77 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms