RNA–Protein interactions for RNA: ENST00000606055.1

LINC00458-204, long intergenic non-protein coding RNA 458, humanhuman

TSL 3

Gene LINC00458, Length 425 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-204ENST00000606055 LINC01547P58512 204 aaPredicted RBP4.28□□□□□ -1.72
LINC00458-204ENST00000606055 Q6ZQY7 126 aa4.28□□□□□ -1.72
LINC00458-204ENST00000606055 SSBP3-AS1Q7Z2R9 100 aa4.28□□□□□ -1.72
LINC00458-204ENST00000606055 FAM218AQ96MZ4 157 aa4.28□□□□□ -1.72
LINC00458-204ENST00000606055 H3BUT2 72 aa4.27□□□□□ -1.73
LINC00458-204ENST00000606055 KRTAP10-8P60410 259 aa4.27□□□□□ -1.73
LINC00458-204ENST00000606055 UBE2V1Q13404 147 aa4.27□□□□□ -1.73
LINC00458-204ENST00000606055 Q8N377 158 aa4.27□□□□□ -1.73
LINC00458-204ENST00000606055 ORMDL1Q9P0S3 153 aa4.27□□□□□ -1.73
LINC00458-204ENST00000606055 LAMTOR3Q9UHA4 124 aa4.27□□□□□ -1.73
LINC00458-204ENST00000606055 CLEC2BQ92478 149 aa4.26□□□□□ -1.73
LINC00458-204ENST00000606055 TCL1BO95988 128 aa4.25□□□□□ -1.73
LINC00458-204ENST00000606055 MT1HL1P0DM35 61 aa4.25□□□□□ -1.73
LINC00458-204ENST00000606055 RPS29P62273 56 aaKnown RBP4.25□□□□□ -1.73
LINC00458-204ENST00000606055 Q6JHZ5 121 aa4.25□□□□□ -1.73
LINC00458-204ENST00000606055 GAGE2AQ6NT46 116 aa4.25□□□□□ -1.73
LINC00458-204ENST00000606055 SMIM29Q86T20 159 aa4.25□□□□□ -1.73
LINC00458-204ENST00000606055 ST20-AS1Q8NBB2 130 aa4.25□□□□□ -1.73
LINC00458-204ENST00000606055 TNXBP22105 4242 aa4.25□□□□□ -1.73
LINC00458-204ENST00000606055 H3BT86 120 aa4.24□□□□□ -1.73
LINC00458-204ENST00000606055 CD164Q04900 197 aa4.24□□□□□ -1.73
LINC00458-204ENST00000606055 SPAG11AQ6PDA7 123 aa4.24□□□□□ -1.73
LINC00458-204ENST00000606055 GTF2H5Q6ZYL4 71 aa4.24□□□□□ -1.73
LINC00458-204ENST00000606055 Q8NBF4 154 aa4.24□□□□□ -1.73
LINC00458-204ENST00000606055 RNF213Q63HN8 5207 aa4.24□□□□□ -1.73
LINC00458-204ENST00000606055 A0A087X002 238 aa4.23□□□□□ -1.73
LINC00458-204ENST00000606055 F8WEM9 126 aa4.23□□□□□ -1.73
LINC00458-204ENST00000606055 KRTAP13-2Q52LG2 175 aa4.23□□□□□ -1.73
LINC00458-204ENST00000606055 PRR26Q8N8Z3 221 aa4.23□□□□□ -1.73
LINC00458-204ENST00000606055 SPCS1Q9Y6A9 102 aa4.23□□□□□ -1.73
LINC00458-204ENST00000606055 A0A1B0GW54 56 aa4.22□□□□□ -1.73
LINC00458-204ENST00000606055 JMJD7-PLA2G4BH0Y9G9 81 aa4.22□□□□□ -1.73
LINC00458-204ENST00000606055 K7EP34 96 aa4.22□□□□□ -1.73
LINC00458-204ENST00000606055 BAALC-AS2P0C853 105 aa4.22□□□□□ -1.73
LINC00458-204ENST00000606055 PDE6GP18545 87 aa4.22□□□□□ -1.73
LINC00458-204ENST00000606055 NDUFV3P56181 108 aaKnown RBP4.22□□□□□ -1.73
LINC00458-204ENST00000606055 TYMSOSQ8TAI1 123 aa4.22□□□□□ -1.73
LINC00458-204ENST00000606055 SPINK1P00995 79 aa4.21□□□□□ -1.74
LINC00458-204ENST00000606055 Q5XG85 94 aa4.21□□□□□ -1.74
LINC00458-204ENST00000606055 Q6Q795 121 aa4.21□□□□□ -1.74
LINC00458-204ENST00000606055 DEFB105AQ8NG35 78 aa4.21□□□□□ -1.74
LINC00458-204ENST00000606055 OBSCN-AS1Q96MR7 158 aa4.21□□□□□ -1.74
LINC00458-204ENST00000606055 NAA38Q9BRA0 125 aaKnown RBP4.21□□□□□ -1.74
LINC00458-204ENST00000606055 F8W1H4 67 aa4.2□□□□□ -1.74
LINC00458-204ENST00000606055 H3BMG7 143 aa4.2□□□□□ -1.74
LINC00458-204ENST00000606055 ANKRD29Q8N6D5 301 aa4.2□□□□□ -1.74
LINC00458-204ENST00000606055 C9JAW5 83 aa4.19□□□□□ -1.74
LINC00458-204ENST00000606055 MOBPQ13875 183 aa4.19□□□□□ -1.74
LINC00458-204ENST00000606055 ANAPC11Q9NYG5 84 aa4.19□□□□□ -1.74
LINC00458-204ENST00000606055 LOC110117498A0A087WWA1 95 aa4.18□□□□□ -1.74
LINC00458-204ENST00000606055 TRBV7-4A0A0J9YYF1 115 aa4.18□□□□□ -1.74
LINC00458-204ENST00000606055 RBM3P98179 157 aaKnown RBP4.18□□□□□ -1.74
LINC00458-204ENST00000606055 C4orf48Q5BLP8 95 aa4.18□□□□□ -1.74
LINC00458-204ENST00000606055 C9orf153Q5TBE3 101 aa4.18□□□□□ -1.74
LINC00458-204ENST00000606055 C3orf22Q8N5N4 141 aa4.18□□□□□ -1.74
LINC00458-204ENST00000606055 LINC00304Q8N9R0 145 aa4.18□□□□□ -1.74
LINC00458-204ENST00000606055 PRO0461Q9UI25 63 aa4.18□□□□□ -1.74
LINC00458-204ENST00000606055 IGLV9-49A0A0B4J1Y8 123 aa4.17□□□□□ -1.74
LINC00458-204ENST00000606055 ASB16-AS1Q495Z4 193 aa4.17□□□□□ -1.74
LINC00458-204ENST00000606055 TEN1Q86WV5 123 aa4.17□□□□□ -1.74
LINC00458-204ENST00000606055 IGFL1Q6UW32 110 aa4.16□□□□□ -1.74
LINC00458-204ENST00000606055 DSCR8Q96T75 97 aa4.16□□□□□ -1.74
LINC00458-204ENST00000606055 LIMD2Q9BT23 127 aa4.16□□□□□ -1.74
LINC00458-204ENST00000606055 TRBV7-7A0A0K0K1E9 115 aa4.14□□□□□ -1.75
LINC00458-204ENST00000606055 SMCPP49901 116 aaPredicted RBP4.14□□□□□ -1.75
LINC00458-204ENST00000606055 SS18L2Q9UHA2 77 aa4.14□□□□□ -1.75
LINC00458-204ENST00000606055 Q6ZQT0 140 aa4.13□□□□□ -1.75
LINC00458-204ENST00000606055 FP248Q71RG6 208 aaPredicted RBP4.13□□□□□ -1.75
LINC00458-204ENST00000606055 A0A1W2PNM2 257 aa4.11□□□□□ -1.75
LINC00458-204ENST00000606055 CCKP06307 115 aa4.11□□□□□ -1.75
LINC00458-204ENST00000606055 A0A1B0GV90 55 aa4.1□□□□□ -1.75
LINC00458-204ENST00000606055 PRR4Q16378 134 aa4.1□□□□□ -1.75
LINC00458-204ENST00000606055 LRP2P98164 4655 aa4.1□□□□□ -1.75
LINC00458-204ENST00000606055 KRTAP9-6A0A140TA67 174 aa4.09□□□□□ -1.75
LINC00458-204ENST00000606055 KRTAP9-2Q9BYQ4 174 aa4.09□□□□□ -1.75
LINC00458-204ENST00000606055 C14orf132Q9NPU4 83 aa4.09□□□□□ -1.75
LINC00458-204ENST00000606055 FAM240AA0A1B0GVK7 77 aa4.08□□□□□ -1.76
LINC00458-204ENST00000606055 ETDBQ3ZM63 59 aa4.08□□□□□ -1.76
LINC00458-204ENST00000606055 MTURNQ8N3F0 131 aa4.08□□□□□ -1.76
LINC00458-204ENST00000606055 A0A087WSZ3 146 aa4.07□□□□□ -1.76
LINC00458-204ENST00000606055 J3KT08 172 aa4.07□□□□□ -1.76
LINC00458-204ENST00000606055 ACYP1P07311 99 aa4.07□□□□□ -1.76
LINC00458-204ENST00000606055 C1orf195Q5TG92 126 aa4.06□□□□□ -1.76
LINC00458-204ENST00000606055 TPRXLQ17RH7 258 aa4.05□□□□□ -1.76
LINC00458-204ENST00000606055 RETNLBQ9BQ08 111 aa4.05□□□□□ -1.76
LINC00458-204ENST00000606055 LINC00472Q9H8W2 130 aa4.05□□□□□ -1.76
LINC00458-204ENST00000606055 A0A0G2JQZ4 141 aa4.04□□□□□ -1.76
LINC00458-204ENST00000606055 HRCT1Q6UXD1 115 aa4.04□□□□□ -1.76
LINC00458-204ENST00000606055 LPAP08519 4548 aa4.04□□□□□ -1.76
LINC00458-204ENST00000606055 J3QR89 54 aa4.03□□□□□ -1.76
LINC00458-204ENST00000606055 Q96NJ1 140 aa4.03□□□□□ -1.76
LINC00458-204ENST00000606055 VPS25Q9BRG1 176 aa4.03□□□□□ -1.76
LINC00458-204ENST00000606055 FAT4Q6V0I7 4981 aa4.03□□□□□ -1.76
LINC00458-204ENST00000606055 MUC2Q02817 5179 aa4.03□□□□□ -1.76
LINC00458-204ENST00000606055 IGLV7-46A0A075B6I9 117 aa4.02□□□□□ -1.77
LINC00458-204ENST00000606055 A0A1B0GV72 72 aa4.02□□□□□ -1.77
LINC00458-204ENST00000606055 NREPQ16612 68 aa4.02□□□□□ -1.77
LINC00458-204ENST00000606055 UBL5Q9BZL1 73 aa4.02□□□□□ -1.77
LINC00458-204ENST00000606055 KRTAP13-3Q3SY46 172 aa4□□□□□ -1.77
LINC00458-204ENST00000606055 A8MWP4 228 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms