RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 Q5XG85 94 aa5.8□□□□□ -1.48
TUBE1-210ENST00000604967 Q6ZQY7 126 aa5.8□□□□□ -1.48
TUBE1-210ENST00000604967 LCE2CQ5TA81 110 aa5.79□□□□□ -1.48
TUBE1-210ENST00000604967 FAM218AQ96MZ4 157 aa5.79□□□□□ -1.48
TUBE1-210ENST00000604967 IGLV8-61A0A075B6I0 122 aa5.78□□□□□ -1.48
TUBE1-210ENST00000604967 hADV29S1A0JD25 119 aa5.78□□□□□ -1.48
TUBE1-210ENST00000604967 LIMD2Q9BT23 127 aa5.78□□□□□ -1.48
TUBE1-210ENST00000604967 HIGD1BQ9P298 99 aa5.78□□□□□ -1.48
TUBE1-210ENST00000604967 IGFL1Q6UW32 110 aa5.77□□□□□ -1.49
TUBE1-210ENST00000604967 A0A0U1RQV1 116 aa5.76□□□□□ -1.49
TUBE1-210ENST00000604967 SEC61BP60468 96 aaKnown RBP5.76□□□□□ -1.49
TUBE1-210ENST00000604967 PYY3Q5JQD4 70 aa5.76□□□□□ -1.49
TUBE1-210ENST00000604967 NHP2Q9NX24 153 aaKnown RBP5.76□□□□□ -1.49
TUBE1-210ENST00000604967 FXYD2P54710 66 aa5.75□□□□□ -1.49
TUBE1-210ENST00000604967 PCOTHQ58A44 107 aa5.75□□□□□ -1.49
TUBE1-210ENST00000604967 VAMP8Q9BV40 100 aa5.75□□□□□ -1.49
TUBE1-210ENST00000604967 H3BUT2 72 aa5.74□□□□□ -1.49
TUBE1-210ENST00000604967 VAMP3Q15836 100 aa5.74□□□□□ -1.49
TUBE1-210ENST00000604967 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.74□□□□□ -1.49
TUBE1-210ENST00000604967 KRTAP9-2Q9BYQ4 174 aa5.74□□□□□ -1.49
TUBE1-210ENST00000604967 A0A0B4J2C4 111 aa5.73□□□□□ -1.49
TUBE1-210ENST00000604967 OCIAD2Q56VL3 154 aa5.73□□□□□ -1.49
TUBE1-210ENST00000604967 CEND1Q8N111 149 aa5.73□□□□□ -1.49
TUBE1-210ENST00000604967 TRBV7-7A0A0K0K1E9 115 aa5.72□□□□□ -1.49
TUBE1-210ENST00000604967 BVES-AS1Q5T3Y7 98 aa5.72□□□□□ -1.49
TUBE1-210ENST00000604967 CLEC2BQ92478 149 aa5.71□□□□□ -1.5
TUBE1-210ENST00000604967 K7ERJ3 54 aa5.7□□□□□ -1.5
TUBE1-210ENST00000604967 RAB37Q96AX2 223 aa5.7□□□□□ -1.5
TUBE1-210ENST00000604967 TRIAP1O43715 76 aa5.69□□□□□ -1.5
TUBE1-210ENST00000604967 Q6JHZ5 121 aa5.69□□□□□ -1.5
TUBE1-210ENST00000604967 TMA7Q9Y2S6 64 aaKnown RBP5.69□□□□□ -1.5
TUBE1-210ENST00000604967 F8WEM9 126 aa5.68□□□□□ -1.5
TUBE1-210ENST00000604967 PRO1854Q9UHT4 67 aa5.68□□□□□ -1.5
TUBE1-210ENST00000604967 RPL37P61927 97 aaKnown RBP5.67□□□□□ -1.5
TUBE1-210ENST00000604967 PPDPFLQ8WWR9 84 aa5.67□□□□□ -1.5
TUBE1-210ENST00000604967 FLGP20930 4061 aaPredicted RBP5.66□□□□□ -1.5
TUBE1-210ENST00000604967 TCL1BO95988 128 aa5.66□□□□□ -1.5
TUBE1-210ENST00000604967 NDUFV3P56181 108 aaKnown RBP5.66□□□□□ -1.5
TUBE1-210ENST00000604967 SNHG12Q9BXW3 62 aa5.66□□□□□ -1.5
TUBE1-210ENST00000604967 H0YGX0 51 aa5.65□□□□□ -1.5
TUBE1-210ENST00000604967 MT1HP80294 61 aa5.65□□□□□ -1.5
TUBE1-210ENST00000604967 Q96NJ1 140 aa5.65□□□□□ -1.5
TUBE1-210ENST00000604967 HSD52Q0P140 79 aa5.64□□□□□ -1.51
TUBE1-210ENST00000604967 Q6Q795 121 aa5.64□□□□□ -1.51
TUBE1-210ENST00000604967 A0A1W2PNM2 257 aa5.63□□□□□ -1.51
TUBE1-210ENST00000604967 OBSCN-AS1Q96MR7 158 aa5.62□□□□□ -1.51
TUBE1-210ENST00000604967 TMEM238LA0A1B0GVL6 79 aa5.61□□□□□ -1.51
TUBE1-210ENST00000604967 A6NJY4 79 aa5.61□□□□□ -1.51
TUBE1-210ENST00000604967 H3BMG7 143 aa5.61□□□□□ -1.51
TUBE1-210ENST00000604967 A0A1B0GX51 115 aa5.6□□□□□ -1.51
TUBE1-210ENST00000604967 FABP2P12104 132 aa5.6□□□□□ -1.51
TUBE1-210ENST00000604967 A0A087WSZ3 146 aa5.59□□□□□ -1.51
TUBE1-210ENST00000604967 A0A1B0GV72 72 aa5.59□□□□□ -1.51
TUBE1-210ENST00000604967 TEN1Q86WV5 123 aa5.59□□□□□ -1.51
TUBE1-210ENST00000604967 UQCR10Q9UDW1 63 aa5.59□□□□□ -1.51
TUBE1-210ENST00000604967 LST1O00453 97 aa5.58□□□□□ -1.52
TUBE1-210ENST00000604967 Q75L30 129 aa5.56□□□□□ -1.52
TUBE1-210ENST00000604967 KRTAP16-1A8MUX0 517 aa5.55□□□□□ -1.52
TUBE1-210ENST00000604967 LORP23490 312 aaPredicted RBP5.55□□□□□ -1.52
TUBE1-210ENST00000604967 PSMB2P49721 201 aa5.55□□□□□ -1.52
TUBE1-210ENST00000604967 A8MUU9 505 aa5.54□□□□□ -1.52
TUBE1-210ENST00000604967 DSCR10P59022 87 aa5.54□□□□□ -1.52
TUBE1-210ENST00000604967 NOTCH2NLQ7Z3S9 236 aa5.54□□□□□ -1.52
TUBE1-210ENST00000604967 C20orf166-AS1Q96NR2 134 aa5.54□□□□□ -1.52
TUBE1-210ENST00000604967 ORMDL1Q9P0S3 153 aa5.54□□□□□ -1.52
TUBE1-210ENST00000604967 KRTAP10-6P60371 365 aaPredicted RBP5.53□□□□□ -1.52
TUBE1-210ENST00000604967 SNCGO76070 127 aa5.52□□□□□ -1.53
TUBE1-210ENST00000604967 DEFB116Q30KQ4 102 aa5.52□□□□□ -1.53
TUBE1-210ENST00000604967 NAA38Q9BRA0 125 aaKnown RBP5.52□□□□□ -1.53
TUBE1-210ENST00000604967 SS18L2Q9UHA2 77 aa5.52□□□□□ -1.53
TUBE1-210ENST00000604967 TRBV7-4A0A0J9YYF1 115 aa5.51□□□□□ -1.53
TUBE1-210ENST00000604967 KRTAP9-6A0A140TA67 174 aa5.51□□□□□ -1.53
TUBE1-210ENST00000604967 ANKRD29Q8N6D5 301 aa5.51□□□□□ -1.53
TUBE1-210ENST00000604967 LINC00472Q9H8W2 130 aa5.51□□□□□ -1.53
TUBE1-210ENST00000604967 DNAL4O96015 105 aa5.5□□□□□ -1.53
TUBE1-210ENST00000604967 TRACP01848 142 aa5.5□□□□□ -1.53
TUBE1-210ENST00000604967 TMEM256-PLSCR3K7ERE1 68 aa5.49□□□□□ -1.53
TUBE1-210ENST00000604967 CCKP06307 115 aa5.48□□□□□ -1.53
TUBE1-210ENST00000604967 UBE2V1Q13404 147 aa5.48□□□□□ -1.53
TUBE1-210ENST00000604967 IGKV4-1P06312 121 aa5.47□□□□□ -1.53
TUBE1-210ENST00000604967 COX6CP09669 75 aa5.47□□□□□ -1.53
TUBE1-210ENST00000604967 ATP11AUNQ6ZP68 121 aa5.47□□□□□ -1.53
TUBE1-210ENST00000604967 SIGMAR1Q99720 223 aa5.47□□□□□ -1.53
TUBE1-210ENST00000604967 GHRHP01286 108 aa5.46□□□□□ -1.54
TUBE1-210ENST00000604967 SCGB1C2P0DMR2 95 aa5.46□□□□□ -1.54
TUBE1-210ENST00000604967 BAALC-AS2P0C853 105 aa5.45□□□□□ -1.54
TUBE1-210ENST00000604967 H3BQ85 93 aa5.44□□□□□ -1.54
TUBE1-210ENST00000604967 SMIM6P0DI80 62 aa5.44□□□□□ -1.54
TUBE1-210ENST00000604967 COX6B2Q6YFQ2 88 aa5.44□□□□□ -1.54
TUBE1-210ENST00000604967 LOC105371267A0A1B0GV96 52 aa5.43□□□□□ -1.54
TUBE1-210ENST00000604967 LINC00313P59037 77 aa5.42□□□□□ -1.54
TUBE1-210ENST00000604967 RBM3P98179 157 aaKnown RBP5.42□□□□□ -1.54
TUBE1-210ENST00000604967 VPS25Q9BRG1 176 aa5.42□□□□□ -1.54
TUBE1-210ENST00000604967 IGHV6-1A0A0B4J1U7 121 aa5.41□□□□□ -1.54
TUBE1-210ENST00000604967 M0R143 59 aa5.4□□□□□ -1.54
TUBE1-210ENST00000604967 M0R2T5 61 aa5.4□□□□□ -1.54
TUBE1-210ENST00000604967 Q6ZQT0 140 aa5.4□□□□□ -1.54
TUBE1-210ENST00000604967 MPLKIPQ8TAP9 179 aa5.4□□□□□ -1.54
TUBE1-210ENST00000604967 HRES1P13985 223 aa5.39□□□□□ -1.55
TUBE1-210ENST00000604967 CRCT1Q9UGL9 99 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms