RNA–Protein interactions for RNA: ENST00000601849.1

VRK3-224, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-224ENST00000601849 TRBV7-6A0A0J9YX20 115 aa5.16□□□□□ -1.58
VRK3-224ENST00000601849 SPATA45Q537H7 98 aa5.16□□□□□ -1.58
VRK3-224ENST00000601849 TTTY13Q9BZ97 58 aa5.16□□□□□ -1.58
VRK3-224ENST00000601849 ZNF815PA8K554 130 aa5.15□□□□□ -1.59
VRK3-224ENST00000601849 KRTAP19-2Q3LHN2 52 aa5.15□□□□□ -1.59
VRK3-224ENST00000601849 A0A1B0GWB2 263 aa5.14□□□□□ -1.59
VRK3-224ENST00000601849 A4D1N5 150 aa5.14□□□□□ -1.59
VRK3-224ENST00000601849 KRTAP10-6P60371 365 aaPredicted RBP5.14□□□□□ -1.59
VRK3-224ENST00000601849 RPL37P61927 97 aaKnown RBP5.14□□□□□ -1.59
VRK3-224ENST00000601849 C1orf195Q5TG92 126 aa5.14□□□□□ -1.59
VRK3-224ENST00000601849 PCP2Q8IVA1 136 aa5.14□□□□□ -1.59
VRK3-224ENST00000601849 LITAFQ99732 161 aa5.14□□□□□ -1.59
VRK3-224ENST00000601849 NHP2Q9NX24 153 aaKnown RBP5.14□□□□□ -1.59
VRK3-224ENST00000601849 A6NDN8 102 aa5.13□□□□□ -1.59
VRK3-224ENST00000601849 LORP23490 312 aaPredicted RBP5.13□□□□□ -1.59
VRK3-224ENST00000601849 F8WEM9 126 aa5.12□□□□□ -1.59
VRK3-224ENST00000601849 TSTD3H0UI37 97 aa5.12□□□□□ -1.59
VRK3-224ENST00000601849 SCGB1D4Q6XE38 83 aa5.12□□□□□ -1.59
VRK3-224ENST00000601849 SMIM29Q86T20 159 aa5.12□□□□□ -1.59
VRK3-224ENST00000601849 C14orf144Q96I85 54 aa5.11□□□□□ -1.59
VRK3-224ENST00000601849 IGLV5-48A0A075B6I7 105 aa5.1□□□□□ -1.59
VRK3-224ENST00000601849 COX8AP10176 69 aa5.1□□□□□ -1.59
VRK3-224ENST00000601849 IFITM1P13164 125 aa5.1□□□□□ -1.59
VRK3-224ENST00000601849 VAMP3Q15836 100 aa5.1□□□□□ -1.59
VRK3-224ENST00000601849 ATP11AUNQ6ZP68 121 aa5.1□□□□□ -1.59
VRK3-224ENST00000601849 Q6ZVH6 145 aa5.1□□□□□ -1.59
VRK3-224ENST00000601849 UQCR10Q9UDW1 63 aa5.1□□□□□ -1.59
VRK3-224ENST00000601849 Q6Q795 121 aa5.09□□□□□ -1.59
VRK3-224ENST00000601849 TRAV13-2A0A0B4J235 113 aa5.08□□□□□ -1.6
VRK3-224ENST00000601849 DLEU1O43261 78 aa5.08□□□□□ -1.6
VRK3-224ENST00000601849 FLGP20930 4061 aaPredicted RBP5.06□□□□□ -1.6
VRK3-224ENST00000601849 A0A0G2JQZ4 141 aa5.05□□□□□ -1.6
VRK3-224ENST00000601849 PCP4L1A6NKN8 68 aa5.05□□□□□ -1.6
VRK3-224ENST00000601849 Q6JHZ5 121 aa5.05□□□□□ -1.6
VRK3-224ENST00000601849 MUSTN1Q8IVN3 82 aa5.05□□□□□ -1.6
VRK3-224ENST00000601849 HIST1H4GQ99525 98 aa5.04□□□□□ -1.6
VRK3-224ENST00000601849 HIGD1BQ9P298 99 aa5.04□□□□□ -1.6
VRK3-224ENST00000601849 SMIM11BQ8TCY0 68 aa5.03□□□□□ -1.6
VRK3-224ENST00000601849 TRBV20-1A0A075B6N2 111 aa5.02□□□□□ -1.61
VRK3-224ENST00000601849 CFC1P0CG37 223 aa5.02□□□□□ -1.61
VRK3-224ENST00000601849 C2orf91Q6ZV80 131 aa5.02□□□□□ -1.61
VRK3-224ENST00000601849 Q75L30 129 aa5.02□□□□□ -1.61
VRK3-224ENST00000601849 CLEC2BQ92478 149 aa5.02□□□□□ -1.61
VRK3-224ENST00000601849 OBSCN-AS1Q96MR7 158 aa5.02□□□□□ -1.61
VRK3-224ENST00000601849 TRBV7-7A0A0K0K1E9 115 aa5.01□□□□□ -1.61
VRK3-224ENST00000601849 hADV29S1A0JD25 119 aa5.01□□□□□ -1.61
VRK3-224ENST00000601849 LST1O00453 97 aa5.01□□□□□ -1.61
VRK3-224ENST00000601849 HSD52Q0P140 79 aa5.01□□□□□ -1.61
VRK3-224ENST00000601849 M0R143 59 aa5□□□□□ -1.61
VRK3-224ENST00000601849 OCIAD2Q56VL3 154 aa5□□□□□ -1.61
VRK3-224ENST00000601849 SNCGO76070 127 aa4.99□□□□□ -1.61
VRK3-224ENST00000601849 LINC00575Q6W349 94 aa4.99□□□□□ -1.61
VRK3-224ENST00000601849 Q6ZQY7 126 aa4.99□□□□□ -1.61
VRK3-224ENST00000601849 Q96NJ1 140 aa4.99□□□□□ -1.61
VRK3-224ENST00000601849 SNHG12Q9BXW3 62 aa4.99□□□□□ -1.61
VRK3-224ENST00000601849 BATFQ16520 125 aa4.98□□□□□ -1.61
VRK3-224ENST00000601849 CEND1Q8N111 149 aa4.98□□□□□ -1.61
VRK3-224ENST00000601849 PPDPFLQ8WWR9 84 aa4.98□□□□□ -1.61
VRK3-224ENST00000601849 SS18L2Q9UHA2 77 aa4.98□□□□□ -1.61
VRK3-224ENST00000601849 IGFL1Q6UW32 110 aa4.97□□□□□ -1.61
VRK3-224ENST00000601849 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.97□□□□□ -1.61
VRK3-224ENST00000601849 BVES-AS1Q5T3Y7 98 aa4.96□□□□□ -1.62
VRK3-224ENST00000601849 USH2AO75445 5202 aa4.96□□□□□ -1.62
VRK3-224ENST00000601849 FXYD2P54710 66 aa4.95□□□□□ -1.62
VRK3-224ENST00000601849 RAB37Q96AX2 223 aa4.94□□□□□ -1.62
VRK3-224ENST00000601849 SSPOA2VEC9 5147 aa4.93□□□□□ -1.62
VRK3-224ENST00000601849 A0A0B4J2C4 111 aa4.93□□□□□ -1.62
VRK3-224ENST00000601849 KRTAP9-7A8MTY7 169 aa4.93□□□□□ -1.62
VRK3-224ENST00000601849 FAM236DA0A1B0GTK5 79 aa4.91□□□□□ -1.62
VRK3-224ENST00000601849 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.91□□□□□ -1.62
VRK3-224ENST00000601849 K7ERJ3 54 aa4.91□□□□□ -1.62
VRK3-224ENST00000601849 FAM236CP0DP71 79 aa4.91□□□□□ -1.62
VRK3-224ENST00000601849 COL5A1-AS1Q5SY13 56 aa4.91□□□□□ -1.62
VRK3-224ENST00000601849 TEN1Q86WV5 123 aa4.91□□□□□ -1.62
VRK3-224ENST00000601849 C20orf166-AS1Q96NR2 134 aa4.91□□□□□ -1.62
VRK3-224ENST00000601849 PRO1854Q9UHT4 67 aa4.91□□□□□ -1.62
VRK3-224ENST00000601849 A8MUU9 505 aa4.89□□□□□ -1.63
VRK3-224ENST00000601849 H3BUT2 72 aa4.89□□□□□ -1.63
VRK3-224ENST00000601849 RBM12B-AS1Q9P1G2 102 aa4.89□□□□□ -1.63
VRK3-224ENST00000601849 KRTAP9-8Q9BYQ0 159 aa4.88□□□□□ -1.63
VRK3-224ENST00000601849 H0YGX0 51 aa4.87□□□□□ -1.63
VRK3-224ENST00000601849 PSMB2P49721 201 aa4.87□□□□□ -1.63
VRK3-224ENST00000601849 MACF1Q9UPN3 7388 aaKnown RBP4.86□□□□□ -1.63
VRK3-224ENST00000601849 A0A087WSZ3 146 aa4.86□□□□□ -1.63
VRK3-224ENST00000601849 NDUFV3P56181 108 aaKnown RBP4.86□□□□□ -1.63
VRK3-224ENST00000601849 LINC00313P59037 77 aa4.86□□□□□ -1.63
VRK3-224ENST00000601849 LINC00846Q9NV44 126 aa4.86□□□□□ -1.63
VRK3-224ENST00000601849 SYNE2Q8WXH0 6885 aaKnown RBP4.86□□□□□ -1.63
VRK3-224ENST00000601849 H3BMG7 143 aa4.85□□□□□ -1.63
VRK3-224ENST00000601849 TAX1BP3O14907 124 aa4.85□□□□□ -1.63
VRK3-224ENST00000601849 COX6CP09669 75 aa4.85□□□□□ -1.63
VRK3-224ENST00000601849 LYRM7Q5U5X0 104 aa4.85□□□□□ -1.63
VRK3-224ENST00000601849 MTURNQ8N3F0 131 aa4.85□□□□□ -1.63
VRK3-224ENST00000601849 C9orf118A6NHY6 69 aa4.84□□□□□ -1.63
VRK3-224ENST00000601849 TRIAP1O43715 76 aa4.84□□□□□ -1.63
VRK3-224ENST00000601849 SCGB1C2P0DMR2 95 aa4.84□□□□□ -1.63
VRK3-224ENST00000601849 DSCR10P59022 87 aa4.84□□□□□ -1.63
VRK3-224ENST00000601849 SIGMAR1Q99720 223 aa4.84□□□□□ -1.63
VRK3-224ENST00000601849 NAA38Q9BRA0 125 aaKnown RBP4.84□□□□□ -1.63
VRK3-224ENST00000601849 FABP2P12104 132 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms