RNA–Protein interactions for RNA: ENST00000600840.1

TRIM28-214, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 338 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-214ENST00000600840 TRBV7-6A0A0J9YX20 115 aa5.3□□□□□ -1.56
TRIM28-214ENST00000600840 S100A7L2Q5SY68 101 aa5.3□□□□□ -1.56
TRIM28-214ENST00000600840 SPINK6Q6UWN8 80 aa5.3□□□□□ -1.56
TRIM28-214ENST00000600840 LINC00643Q86TS7 51 aa5.3□□□□□ -1.56
TRIM28-214ENST00000600840 MT-ATP8P03928 68 aa5.29□□□□□ -1.56
TRIM28-214ENST00000600840 UBE2BP63146 152 aa5.29□□□□□ -1.56
TRIM28-214ENST00000600840 OBSCN-AS1Q96MR7 158 aa5.29□□□□□ -1.56
TRIM28-214ENST00000600840 FAM218AQ96MZ4 157 aa5.29□□□□□ -1.56
TRIM28-214ENST00000600840 TRBV7-7A0A0K0K1E9 115 aa5.28□□□□□ -1.56
TRIM28-214ENST00000600840 BCE1O60756 84 aa5.28□□□□□ -1.56
TRIM28-214ENST00000600840 IGLV7-43P04211 117 aa5.28□□□□□ -1.56
TRIM28-214ENST00000600840 PRYO14603 147 aa5.27□□□□□ -1.57
TRIM28-214ENST00000600840 PDE6GP18545 87 aa5.27□□□□□ -1.57
TRIM28-214ENST00000600840 C1orf137Q5JT78 98 aa5.27□□□□□ -1.57
TRIM28-214ENST00000600840 REG3GQ6UW15 175 aa5.27□□□□□ -1.57
TRIM28-214ENST00000600840 H0Y9J4 135 aa5.26□□□□□ -1.57
TRIM28-214ENST00000600840 ZNF861PO60384 105 aa5.26□□□□□ -1.57
TRIM28-214ENST00000600840 LPAP08519 4548 aa5.25□□□□□ -1.57
TRIM28-214ENST00000600840 TRAV23DV6A0A075B6W5 121 aa5.25□□□□□ -1.57
TRIM28-214ENST00000600840 B5MCH6 92 aa5.25□□□□□ -1.57
TRIM28-214ENST00000600840 ZNF73O43830 326 aaPredicted RBP5.25□□□□□ -1.57
TRIM28-214ENST00000600840 ATP5EP2Q5VTU8 51 aa5.25□□□□□ -1.57
TRIM28-214ENST00000600840 LINC00575Q6W349 94 aa5.25□□□□□ -1.57
TRIM28-214ENST00000600840 DIRC1Q969H9 104 aa5.25□□□□□ -1.57
TRIM28-214ENST00000600840 hADV29S1A0JD25 119 aa5.24□□□□□ -1.57
TRIM28-214ENST00000600840 C6orf99Q4VX62 202 aa5.24□□□□□ -1.57
TRIM28-214ENST00000600840 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.24□□□□□ -1.57
TRIM28-214ENST00000600840 ANAPC13Q9BS18 74 aa5.24□□□□□ -1.57
TRIM28-214ENST00000600840 PRLHP81277 87 aa5.23□□□□□ -1.57
TRIM28-214ENST00000600840 LCE2AQ5TA79 106 aaPredicted RBP5.23□□□□□ -1.57
TRIM28-214ENST00000600840 GAGE2AQ6NT46 116 aa5.23□□□□□ -1.57
TRIM28-214ENST00000600840 SMCR5Q8TEV8 140 aa5.23□□□□□ -1.57
TRIM28-214ENST00000600840 Q9BRP9 147 aa5.23□□□□□ -1.57
TRIM28-214ENST00000600840 CCKP06307 115 aa5.22□□□□□ -1.57
TRIM28-214ENST00000600840 KRTAP1-4P0C5Y4 121 aa5.22□□□□□ -1.57
TRIM28-214ENST00000600840 NDUFV3P56181 108 aaKnown RBP5.22□□□□□ -1.57
TRIM28-214ENST00000600840 Q6ZRX8 168 aa5.22□□□□□ -1.57
TRIM28-214ENST00000600840 FAM19A1Q7Z5A9 133 aa5.22□□□□□ -1.57
TRIM28-214ENST00000600840 PRR26Q8N8Z3 221 aa5.22□□□□□ -1.57
TRIM28-214ENST00000600840 LOC110117498A0A087WWA1 95 aa5.21□□□□□ -1.58
TRIM28-214ENST00000600840 ERC2-IT1O76042 136 aa5.21□□□□□ -1.58
TRIM28-214ENST00000600840 COX7BP24311 80 aa5.21□□□□□ -1.58
TRIM28-214ENST00000600840 ELOF1P60002 83 aaKnown RBP5.21□□□□□ -1.58
TRIM28-214ENST00000600840 Q6JHZ5 121 aa5.21□□□□□ -1.58
TRIM28-214ENST00000600840 ETDCA0A1B0GVM5 59 aa5.2□□□□□ -1.58
TRIM28-214ENST00000600840 C14orf132Q9NPU4 83 aa5.2□□□□□ -1.58
TRIM28-214ENST00000600840 UBE2AP49459 152 aa5.19□□□□□ -1.58
TRIM28-214ENST00000600840 RBM3P98179 157 aaKnown RBP5.19□□□□□ -1.58
TRIM28-214ENST00000600840 DSCR8Q96T75 97 aa5.18□□□□□ -1.58
TRIM28-214ENST00000600840 UBL5Q9BZL1 73 aa5.18□□□□□ -1.58
TRIM28-214ENST00000600840 FAT4Q6V0I7 4981 aa5.17□□□□□ -1.58
TRIM28-214ENST00000600840 A0A1B0GW54 56 aa5.17□□□□□ -1.58
TRIM28-214ENST00000600840 LINC01547P58512 204 aaPredicted RBP5.17□□□□□ -1.58
TRIM28-214ENST00000600840 LAMTOR3Q9UHA4 124 aa5.17□□□□□ -1.58
TRIM28-214ENST00000600840 A0A0U1RQV1 116 aa5.16□□□□□ -1.58
TRIM28-214ENST00000600840 ATOX1O00244 68 aa5.16□□□□□ -1.58
TRIM28-214ENST00000600840 SPRR4Q96PI1 79 aa5.16□□□□□ -1.58
TRIM28-214ENST00000600840 HIGD2AQ9BW72 106 aa5.16□□□□□ -1.58
TRIM28-214ENST00000600840 DHRS4-AS1Q9P1J3 65 aa5.16□□□□□ -1.58
TRIM28-214ENST00000600840 SPRR1BP22528 89 aa5.15□□□□□ -1.59
TRIM28-214ENST00000600840 LINC00483Q53H64 154 aa5.15□□□□□ -1.59
TRIM28-214ENST00000600840 Q6ZQT0 140 aa5.15□□□□□ -1.59
TRIM28-214ENST00000600840 Q6ZQY7 126 aa5.15□□□□□ -1.59
TRIM28-214ENST00000600840 ST20-AS1Q8NBB2 130 aa5.15□□□□□ -1.59
TRIM28-214ENST00000600840 LINC00846Q9NV44 126 aa5.15□□□□□ -1.59
TRIM28-214ENST00000600840 ANAPC11Q9NYG5 84 aa5.15□□□□□ -1.59
TRIM28-214ENST00000600840 MUC2Q02817 5179 aa5.15□□□□□ -1.59
TRIM28-214ENST00000600840 A0A087X002 238 aa5.14□□□□□ -1.59
TRIM28-214ENST00000600840 FAM236AA0A1B0GUQ0 79 aa5.14□□□□□ -1.59
TRIM28-214ENST00000600840 FAM236BA0A1B0GV22 79 aa5.14□□□□□ -1.59
TRIM28-214ENST00000600840 KRTAP13-2Q52LG2 175 aa5.14□□□□□ -1.59
TRIM28-214ENST00000600840 IGLV5-48A0A075B6I7 105 aa5.13□□□□□ -1.59
TRIM28-214ENST00000600840 HIST1H4AP62805 103 aaKnown RBP5.13□□□□□ -1.59
TRIM28-214ENST00000600840 SMIM29Q86T20 159 aa5.13□□□□□ -1.59
TRIM28-214ENST00000600840 TRBV7-4A0A0J9YYF1 115 aa5.12□□□□□ -1.59
TRIM28-214ENST00000600840 UQCRQO14949 82 aa5.12□□□□□ -1.59
TRIM28-214ENST00000600840 FAM229BQ4G0N7 80 aa5.12□□□□□ -1.59
TRIM28-214ENST00000600840 CXCL6P80162 114 aa5.11□□□□□ -1.59
TRIM28-214ENST00000600840 Q8N377 158 aa5.11□□□□□ -1.59
TRIM28-214ENST00000600840 SMIM20Q8N5G0 67 aa5.11□□□□□ -1.59
TRIM28-214ENST00000600840 CRCT1Q9UGL9 99 aa5.1□□□□□ -1.59
TRIM28-214ENST00000600840 ZNF706Q9Y5V0 76 aaPredicted RBP5.1□□□□□ -1.59
TRIM28-214ENST00000600840 C3orf22Q8N5N4 141 aa5.09□□□□□ -1.59
TRIM28-214ENST00000600840 CRYGAP11844 174 aa5.08□□□□□ -1.6
TRIM28-214ENST00000600840 COX7CP15954 63 aa5.08□□□□□ -1.6
TRIM28-214ENST00000600840 PRR4Q16378 134 aa5.08□□□□□ -1.6
TRIM28-214ENST00000600840 SERP2Q8N6R1 65 aa5.07□□□□□ -1.6
TRIM28-214ENST00000600840 IGKV3D-7A0A0C4DH55 119 aa5.06□□□□□ -1.6
TRIM28-214ENST00000600840 Q6ZVQ6 151 aa5.06□□□□□ -1.6
TRIM28-214ENST00000600840 DEFB105AQ8NG35 78 aa5.06□□□□□ -1.6
TRIM28-214ENST00000600840 C9orf153Q5TBE3 101 aa5.05□□□□□ -1.6
TRIM28-214ENST00000600840 IGLV8-61A0A075B6I0 122 aa5.04□□□□□ -1.6
TRIM28-214ENST00000600840 CCDC179H3BU77 68 aa5.04□□□□□ -1.6
TRIM28-214ENST00000600840 SSBP3-AS1Q7Z2R9 100 aa5.04□□□□□ -1.6
TRIM28-214ENST00000600840 F8WEM9 126 aa5.03□□□□□ -1.6
TRIM28-214ENST00000600840 LCE2DQ5TA82 110 aaPredicted RBP5.03□□□□□ -1.6
TRIM28-214ENST00000600840 TYMSOSQ8TAI1 123 aa5.03□□□□□ -1.6
TRIM28-214ENST00000600840 RETNLBQ9BQ08 111 aa5.02□□□□□ -1.61
TRIM28-214ENST00000600840 TRAV7A0A075B6U4 112 aa5.01□□□□□ -1.61
TRIM28-214ENST00000600840 IGLV9-49A0A0B4J1Y8 123 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms