RNA–Protein interactions for RNA: ENST00000600237.5

SYMPK-215, Transcript of symplekin, humanhuman

TSL 5

Gene SYMPK, Length 5,164 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-215ENST00000600237 SPRR1BP22528 89 aa8.99□□□□□ -0.97
SYMPK-215ENST00000600237 Q75L30 129 aa8.99□□□□□ -0.97
SYMPK-215ENST00000600237 HRES1P13985 223 aa8.99□□□□□ -0.97
SYMPK-215ENST00000600237 IGSF10Q6WRI0 2623 aa8.97□□□□□ -0.97
SYMPK-215ENST00000600237 CFAP54Q96N23 3096 aa8.97□□□□□ -0.97
SYMPK-215ENST00000600237 DSPP15924 2871 aaKnown RBP8.96□□□□□ -0.98
SYMPK-215ENST00000600237 PLAC8Q9NZF1 115 aa8.96□□□□□ -0.98
SYMPK-215ENST00000600237 NOTCH1P46531 2555 aa8.95□□□□□ -0.98
SYMPK-215ENST00000600237 GCN1Q92616 2671 aaKnown RBP8.95□□□□□ -0.98
SYMPK-215ENST00000600237 LINC01558Q9Y6Z2 57 aa8.95□□□□□ -0.98
SYMPK-215ENST00000600237 Q8N9P0 234 aaPredicted RBP8.95□□□□□ -0.98
SYMPK-215ENST00000600237 WDFY4Q6ZS81 3184 aa8.94□□□□□ -0.98
SYMPK-215ENST00000600237 A0A0D9SG42 100 aa8.93□□□□□ -0.98
SYMPK-215ENST00000600237 A0A0C4DFX4 3053 aa8.93□□□□□ -0.98
SYMPK-215ENST00000600237 Q5XG85 94 aa8.93□□□□□ -0.98
SYMPK-215ENST00000600237 LINC00472Q9H8W2 130 aa8.93□□□□□ -0.98
SYMPK-215ENST00000600237 BRCA2P51587 3418 aa8.93□□□□□ -0.98
SYMPK-215ENST00000600237 BAHCC1Q9P281 2608 aa8.92□□□□□ -0.98
SYMPK-215ENST00000600237 CYSTM1Q9H1C7 97 aa8.92□□□□□ -0.98
SYMPK-215ENST00000600237 FP248Q71RG6 208 aaPredicted RBP8.91□□□□□ -0.98
SYMPK-215ENST00000600237 PRUNE2Q8WUY3 3088 aa8.91□□□□□ -0.98
SYMPK-215ENST00000600237 A0A1B0GU33 70 aa8.9□□□□□ -0.98
SYMPK-215ENST00000600237 LINC01554Q52M75 96 aa8.88□□□□□ -0.99
SYMPK-215ENST00000600237 KRTAP26-1Q6PEX3 210 aa8.87□□□□□ -0.99
SYMPK-215ENST00000600237 FLG2Q5D862 2391 aaPredicted RBP8.86□□□□□ -0.99
SYMPK-215ENST00000600237 ZCCHC13Q8WW36 166 aaKnown RBP8.86□□□□□ -0.99
SYMPK-215ENST00000600237 Q6ZSA8 131 aa8.83□□□□□ -1
SYMPK-215ENST00000600237 Q5W150 140 aa8.81□□□□□ -1
SYMPK-215ENST00000600237 LAMA2P24043 3122 aaKnown RBP8.8□□□□□ -1
SYMPK-215ENST00000600237 Q5VV11 94 aa8.8□□□□□ -1
SYMPK-215ENST00000600237 MAP1AP78559 2803 aaPredicted RBP8.79□□□□□ -1
SYMPK-215ENST00000600237 KRTAP1-5Q9BYS1 174 aa8.79□□□□□ -1
SYMPK-215ENST00000600237 TRIOO75962 3097 aa8.77□□□□□ -1.01
SYMPK-215ENST00000600237 LCE6AA0A183 80 aa8.76□□□□□ -1.01
SYMPK-215ENST00000600237 DMAC1Q96GE9 116 aa8.75□□□□□ -1.01
SYMPK-215ENST00000600237 UBR5O95071 2799 aaPredicted RBP8.75□□□□□ -1.01
SYMPK-215ENST00000600237 NBEAL2Q6ZNJ1 2754 aa8.74□□□□□ -1.01
SYMPK-215ENST00000600237 LUZP6Q538Z0 58 aa8.73□□□□□ -1.01
SYMPK-215ENST00000600237 UNC80Q8N2C7 3258 aa8.72□□□□□ -1.01
SYMPK-215ENST00000600237 KRTAP4-16G5E9R7 235 aaPredicted RBP8.72□□□□□ -1.01
SYMPK-215ENST00000600237 CSAG1Q6PB30 78 aa8.7□□□□□ -1.02
SYMPK-215ENST00000600237 OXTP01178 125 aa8.69□□□□□ -1.02
SYMPK-215ENST00000600237 LINC00483Q53H64 154 aa8.69□□□□□ -1.02
SYMPK-215ENST00000600237 SPINK7P58062 85 aa8.69□□□□□ -1.02
SYMPK-215ENST00000600237 CAMK2N1Q7Z7J9 78 aa8.69□□□□□ -1.02
SYMPK-215ENST00000600237 XIRP2A4UGR9 3374 aa8.69□□□□□ -1.02
SYMPK-215ENST00000600237 DMBT1Q9UGM3 2413 aaPredicted RBP8.68□□□□□ -1.02
SYMPK-215ENST00000600237 STAB2Q8WWQ8 2551 aa8.67□□□□□ -1.02
SYMPK-215ENST00000600237 Q6ZR54 194 aa8.65□□□□□ -1.02
SYMPK-215ENST00000600237 S4R3F8 94 aa8.65□□□□□ -1.03
SYMPK-215ENST00000600237 KRTAP29-1A8MX34 341 aaPredicted RBP8.64□□□□□ -1.03
SYMPK-215ENST00000600237 KRTAP10-1P60331 282 aa8.64□□□□□ -1.03
SYMPK-215ENST00000600237 VPS13AQ96RL7 3174 aa8.64□□□□□ -1.03
SYMPK-215ENST00000600237 KRTAP10-2P60368 255 aa8.63□□□□□ -1.03
SYMPK-215ENST00000600237 PRAC1Q96KF2 57 aa8.63□□□□□ -1.03
SYMPK-215ENST00000600237 Q5VSD8 79 aa8.61□□□□□ -1.03
SYMPK-215ENST00000600237 FLNCQ14315 2725 aa8.61□□□□□ -1.03
SYMPK-215ENST00000600237 NSD1Q96L73 2696 aaPredicted RBP8.61□□□□□ -1.03
SYMPK-215ENST00000600237 ITPR2Q14571 2701 aa8.6□□□□□ -1.03
SYMPK-215ENST00000600237 FRYQ5TBA9 3013 aa8.59□□□□□ -1.03
SYMPK-215ENST00000600237 CDH23Q9H251 3354 aa8.58□□□□□ -1.04
SYMPK-215ENST00000600237 ITPR1Q14643 2758 aa8.57□□□□□ -1.04
SYMPK-215ENST00000600237 RPL37P61927 97 aaKnown RBP8.53□□□□□ -1.04
SYMPK-215ENST00000600237 PANO1I0J062 215 aa8.53□□□□□ -1.04
SYMPK-215ENST00000600237 R4GN34 69 aa8.52□□□□□ -1.05
SYMPK-215ENST00000600237 SEC61BP60468 96 aaKnown RBP8.49□□□□□ -1.05
SYMPK-215ENST00000600237 ASB16-AS1Q495Z4 193 aa8.49□□□□□ -1.05
SYMPK-215ENST00000600237 M0R2T5 61 aa8.49□□□□□ -1.05
SYMPK-215ENST00000600237 ATMQ13315 3056 aa8.48□□□□□ -1.05
SYMPK-215ENST00000600237 H1FX-AS1Q4G0G2 97 aa8.47□□□□□ -1.05
SYMPK-215ENST00000600237 KRTAP21-3Q3LHN1 58 aa8.46□□□□□ -1.06
SYMPK-215ENST00000600237 TACC2O95359 2948 aa8.45□□□□□ -1.06
SYMPK-215ENST00000600237 FRYLO94915 3013 aa8.45□□□□□ -1.06
SYMPK-215ENST00000600237 ROMO1P60602 79 aa8.45□□□□□ -1.06
SYMPK-215ENST00000600237 COL12A1Q99715 3063 aa8.44□□□□□ -1.06
SYMPK-215ENST00000600237 HIVEP1P15822 2718 aa8.44□□□□□ -1.06
SYMPK-215ENST00000600237 SZT2Q5T011 3432 aa8.44□□□□□ -1.06
SYMPK-215ENST00000600237 A0A087X002 238 aa8.43□□□□□ -1.06
SYMPK-215ENST00000600237 Q6ZRN7 208 aaPredicted RBP8.39□□□□□ -1.07
SYMPK-215ENST00000600237 NOTCH2NLQ7Z3S9 236 aa8.39□□□□□ -1.07
SYMPK-215ENST00000600237 KALRNO60229 2985 aa8.38□□□□□ -1.07
SYMPK-215ENST00000600237 SPATA8Q6RVD6 105 aa8.38□□□□□ -1.07
SYMPK-215ENST00000600237 KMT2BQ9UMN6 2715 aaPredicted RBP8.37□□□□□ -1.07
SYMPK-215ENST00000600237 KRTAP11-1Q8IUC1 163 aa8.36□□□□□ -1.07
SYMPK-215ENST00000600237 KRTAP7-1Q8IUC3 87 aa8.36□□□□□ -1.07
SYMPK-215ENST00000600237 H3BS24 57 aa8.35□□□□□ -1.07
SYMPK-215ENST00000600237 RPS29P62273 56 aaKnown RBP8.35□□□□□ -1.07
SYMPK-215ENST00000600237 DMXL2Q8TDJ6 3036 aa8.35□□□□□ -1.07
SYMPK-215ENST00000600237 UTP20O75691 2785 aaKnown RBP8.35□□□□□ -1.07
SYMPK-215ENST00000600237 LAMA1P25391 3075 aa8.35□□□□□ -1.07
SYMPK-215ENST00000600237 CELSR3Q9NYQ7 3312 aa8.34□□□□□ -1.07
SYMPK-215ENST00000600237 M0QZ58 72 aa8.34□□□□□ -1.07
SYMPK-215ENST00000600237 A0A0A0MQY5 61 aa8.33□□□□□ -1.08
SYMPK-215ENST00000600237 FREM2Q5SZK8 3169 aa8.33□□□□□ -1.08
SYMPK-215ENST00000600237 REV3LO60673 3130 aa8.32□□□□□ -1.08
SYMPK-215ENST00000600237 NBEAQ8NFP9 2946 aa8.32□□□□□ -1.08
SYMPK-215ENST00000600237 NIPBLQ6KC79 2804 aaeCLIP8.31□□□□□ -1.086e-7■■■□□ 15
SYMPK-215ENST00000600237 TENM4Q6N022 2769 aa8.3□□□□□ -1.08
SYMPK-215ENST00000600237 KRTAP13-1Q8IUC0 172 aa8.3□□□□□ -1.08
SYMPK-215ENST00000600237 ADGRG4Q8IZF6 3080 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms