RNA–Protein interactions for RNA: ENST00000600190.1

FARP1-229, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-229ENST00000600190 LINC00575Q6W349 94 aa10.81□□□□□ -0.68
FARP1-229ENST00000600190 COX6CP09669 75 aa10.78□□□□□ -0.68
FARP1-229ENST00000600190 SPRR1BP22528 89 aa10.78□□□□□ -0.68
FARP1-229ENST00000600190 MOBPQ13875 183 aa10.78□□□□□ -0.68
FARP1-229ENST00000600190 M0R143 59 aa10.77□□□□□ -0.69
FARP1-229ENST00000600190 PSMB2P49721 201 aa10.77□□□□□ -0.69
FARP1-229ENST00000600190 GHRHP01286 108 aa10.75□□□□□ -0.69
FARP1-229ENST00000600190 Q8NBF4 154 aa10.75□□□□□ -0.69
FARP1-229ENST00000600190 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.74□□□□□ -0.69
FARP1-229ENST00000600190 Q6ZQY7 126 aa10.73□□□□□ -0.69
FARP1-229ENST00000600190 IGLV5-48A0A075B6I7 105 aa10.72□□□□□ -0.69
FARP1-229ENST00000600190 KRTAP9-6A0A140TA67 174 aa10.72□□□□□ -0.69
FARP1-229ENST00000600190 F8WEM9 126 aa10.72□□□□□ -0.69
FARP1-229ENST00000600190 SPINK1P00995 79 aa10.72□□□□□ -0.69
FARP1-229ENST00000600190 OCIAD2Q56VL3 154 aa10.72□□□□□ -0.69
FARP1-229ENST00000600190 A0A1B0GX51 115 aa10.7□□□□□ -0.7
FARP1-229ENST00000600190 K7ERJ3 54 aa10.69□□□□□ -0.7
FARP1-229ENST00000600190 SCGB1C2P0DMR2 95 aa10.69□□□□□ -0.7
FARP1-229ENST00000600190 FP248Q71RG6 208 aaPredicted RBP10.69□□□□□ -0.7
FARP1-229ENST00000600190 PPDPFLQ8WWR9 84 aa10.69□□□□□ -0.7
FARP1-229ENST00000600190 SNHG12Q9BXW3 62 aa10.69□□□□□ -0.7
FARP1-229ENST00000600190 Q8N377 158 aa10.68□□□□□ -0.7
FARP1-229ENST00000600190 TRIAP1O43715 76 aa10.67□□□□□ -0.7
FARP1-229ENST00000600190 DNAL4O96015 105 aa10.67□□□□□ -0.7
FARP1-229ENST00000600190 LINC01547P58512 204 aaPredicted RBP10.66□□□□□ -0.7
FARP1-229ENST00000600190 KRTAP13-3Q3SY46 172 aa10.64□□□□□ -0.71
FARP1-229ENST00000600190 SMIM29Q86T20 159 aa10.63□□□□□ -0.71
FARP1-229ENST00000600190 H3BQ85 93 aa10.62□□□□□ -0.71
FARP1-229ENST00000600190 RPS29P62273 56 aaKnown RBP10.62□□□□□ -0.71
FARP1-229ENST00000600190 ASB16-AS1Q495Z4 193 aa10.61□□□□□ -0.71
FARP1-229ENST00000600190 BATFQ16520 125 aa10.6□□□□□ -0.71
FARP1-229ENST00000600190 CLEC2BQ92478 149 aa10.6□□□□□ -0.71
FARP1-229ENST00000600190 FAM218AQ96MZ4 157 aa10.6□□□□□ -0.71
FARP1-229ENST00000600190 LIMD2Q9BT23 127 aa10.6□□□□□ -0.71
FARP1-229ENST00000600190 Q6JHZ5 121 aa10.59□□□□□ -0.71
FARP1-229ENST00000600190 HRCT1Q6UXD1 115 aa10.59□□□□□ -0.71
FARP1-229ENST00000600190 FABP2P12104 132 aa10.58□□□□□ -0.72
FARP1-229ENST00000600190 CD164Q04900 197 aa10.58□□□□□ -0.72
FARP1-229ENST00000600190 ORMDL1Q9P0S3 153 aa10.57□□□□□ -0.72
FARP1-229ENST00000600190 SEC61BP60468 96 aaKnown RBP10.56□□□□□ -0.72
FARP1-229ENST00000600190 LYRM7Q5U5X0 104 aa10.55□□□□□ -0.72
FARP1-229ENST00000600190 KRTAP4-1Q9BYQ7 146 aa10.55□□□□□ -0.72
FARP1-229ENST00000600190 TMEM256-PLSCR3K7ERE1 68 aa10.54□□□□□ -0.72
FARP1-229ENST00000600190 NDUFV3P56181 108 aaKnown RBP10.53□□□□□ -0.72
FARP1-229ENST00000600190 TRACP01848 142 aa10.52□□□□□ -0.73
FARP1-229ENST00000600190 IGLV8-61A0A075B6I0 122 aa10.51□□□□□ -0.73
FARP1-229ENST00000600190 H3BMG7 143 aa10.49□□□□□ -0.73
FARP1-229ENST00000600190 LST1O00453 97 aa10.49□□□□□ -0.73
FARP1-229ENST00000600190 TCL1BO95988 128 aa10.49□□□□□ -0.73
FARP1-229ENST00000600190 ATXN8Q156A1 80 aa10.48□□□□□ -0.73
FARP1-229ENST00000600190 FSIP2Q5CZC0 6907 aa10.47□□□□□ -0.73
FARP1-229ENST00000600190 IGFL1Q6UW32 110 aa10.46□□□□□ -0.73
FARP1-229ENST00000600190 NAA38Q9BRA0 125 aaKnown RBP10.46□□□□□ -0.73
FARP1-229ENST00000600190 A0A0G2JQZ4 141 aa10.45□□□□□ -0.74
FARP1-229ENST00000600190 H3BUT2 72 aa10.44□□□□□ -0.74
FARP1-229ENST00000600190 TRBV20-1A0A075B6N2 111 aa10.43□□□□□ -0.74
FARP1-229ENST00000600190 UBE2V1Q13404 147 aa10.43□□□□□ -0.74
FARP1-229ENST00000600190 LCE2DQ5TA82 110 aaPredicted RBP10.43□□□□□ -0.74
FARP1-229ENST00000600190 BAALC-AS2P0C853 105 aa10.42□□□□□ -0.74
FARP1-229ENST00000600190 XP32Q5T750 250 aa10.42□□□□□ -0.74
FARP1-229ENST00000600190 Q5XG85 94 aa10.42□□□□□ -0.74
FARP1-229ENST00000600190 C9orf118A6NHY6 69 aa10.41□□□□□ -0.74
FARP1-229ENST00000600190 TEN1Q86WV5 123 aa10.41□□□□□ -0.74
FARP1-229ENST00000600190 ANKRD29Q8N6D5 301 aa10.41□□□□□ -0.74
FARP1-229ENST00000600190 TRBV7-7A0A0K0K1E9 115 aa10.39□□□□□ -0.75
FARP1-229ENST00000600190 SS18L2Q9UHA2 77 aa10.38□□□□□ -0.75
FARP1-229ENST00000600190 RBM3P98179 157 aaKnown RBP10.36□□□□□ -0.75
FARP1-229ENST00000600190 COL5A1-AS1Q5SY13 56 aa10.36□□□□□ -0.75
FARP1-229ENST00000600190 Q6Q795 121 aa10.36□□□□□ -0.75
FARP1-229ENST00000600190 A0A1B0GV72 72 aa10.35□□□□□ -0.75
FARP1-229ENST00000600190 PCP4L1A6NKN8 68 aa10.35□□□□□ -0.75
FARP1-229ENST00000600190 TAX1BP3O14907 124 aa10.35□□□□□ -0.75
FARP1-229ENST00000600190 DSCR8Q96T75 97 aa10.35□□□□□ -0.75
FARP1-229ENST00000600190 A0A1W2PPM0 123 aa10.33□□□□□ -0.76
FARP1-229ENST00000600190 LCE2CQ5TA81 110 aa10.33□□□□□ -0.76
FARP1-229ENST00000600190 CRCT1Q9UGL9 99 aa10.33□□□□□ -0.76
FARP1-229ENST00000600190 JMJD7-PLA2G4BH0Y9G9 81 aa10.32□□□□□ -0.76
FARP1-229ENST00000600190 C9JAW5 83 aa10.31□□□□□ -0.76
FARP1-229ENST00000600190 C1orf195Q5TG92 126 aa10.31□□□□□ -0.76
FARP1-229ENST00000600190 CCKP06307 115 aa10.29□□□□□ -0.76
FARP1-229ENST00000600190 TRBV7-4A0A0J9YYF1 115 aa10.28□□□□□ -0.76
FARP1-229ENST00000600190 PCOTHQ58A44 107 aa10.28□□□□□ -0.76
FARP1-229ENST00000600190 A0A087WSZ3 146 aa10.27□□□□□ -0.77
FARP1-229ENST00000600190 C9orf92A6NGG3 77 aa10.27□□□□□ -0.77
FARP1-229ENST00000600190 VPS25Q9BRG1 176 aa10.27□□□□□ -0.77
FARP1-229ENST00000600190 C21orf62-AS1Q17RA5 79 aa10.26□□□□□ -0.77
FARP1-229ENST00000600190 KRTAP19-2Q3LHN2 52 aa10.26□□□□□ -0.77
FARP1-229ENST00000600190 SPCS1Q9Y6A9 102 aa10.25□□□□□ -0.77
FARP1-229ENST00000600190 A0A1W2PNM2 257 aa10.24□□□□□ -0.77
FARP1-229ENST00000600190 MT1HP80294 61 aa10.24□□□□□ -0.77
FARP1-229ENST00000600190 PDE6GP18545 87 aa10.23□□□□□ -0.77
FARP1-229ENST00000600190 H3BT86 120 aa10.22□□□□□ -0.77
FARP1-229ENST00000600190 A0A1B0GW54 56 aa10.15□□□□□ -0.78
FARP1-229ENST00000600190 GTF2H5Q6ZYL4 71 aa10.15□□□□□ -0.78
FARP1-229ENST00000600190 LOC110117498A0A087WWA1 95 aa10.14□□□□□ -0.79
FARP1-229ENST00000600190 C14orf132Q9NPU4 83 aa10.14□□□□□ -0.79
FARP1-229ENST00000600190 MTURNQ8N3F0 131 aa10.13□□□□□ -0.79
FARP1-229ENST00000600190 Q6ZQT0 140 aa10.12□□□□□ -0.79
FARP1-229ENST00000600190 K7EP34 96 aa10.11□□□□□ -0.79
FARP1-229ENST00000600190 IGKV4-1P06312 121 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms