RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 LST1O00453 97 aa8.12□□□□□ -1.11
SHKBP1-218ENST00000598907 KRTAP9-7A8MTY7 169 aa8.11□□□□□ -1.11
SHKBP1-218ENST00000598907 TCL1BO95988 128 aa8.11□□□□□ -1.11
SHKBP1-218ENST00000598907 LYRM7Q5U5X0 104 aa8.11□□□□□ -1.11
SHKBP1-218ENST00000598907 ST20-AS1Q8NBB2 130 aa8.11□□□□□ -1.11
SHKBP1-218ENST00000598907 SPRR4Q96PI1 79 aa8.11□□□□□ -1.11
SHKBP1-218ENST00000598907 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.1□□□□□ -1.11
SHKBP1-218ENST00000598907 IGLV5-48A0A075B6I7 105 aa8.09□□□□□ -1.11
SHKBP1-218ENST00000598907 TRBV20-1A0A075B6N2 111 aa8.09□□□□□ -1.11
SHKBP1-218ENST00000598907 SNCGO76070 127 aa8.09□□□□□ -1.11
SHKBP1-218ENST00000598907 TRACP01848 142 aa8.09□□□□□ -1.11
SHKBP1-218ENST00000598907 FABP2P12104 132 aa8.09□□□□□ -1.11
SHKBP1-218ENST00000598907 SPRR1BP22528 89 aa8.09□□□□□ -1.11
SHKBP1-218ENST00000598907 ZNF706Q9Y5V0 76 aaPredicted RBP8.09□□□□□ -1.11
SHKBP1-218ENST00000598907 LINC00483Q53H64 154 aa8.08□□□□□ -1.12
SHKBP1-218ENST00000598907 Q6ZQY7 126 aa8.08□□□□□ -1.12
SHKBP1-218ENST00000598907 ATXN8Q156A1 80 aa8.07□□□□□ -1.12
SHKBP1-218ENST00000598907 OCIAD2Q56VL3 154 aa8.06□□□□□ -1.12
SHKBP1-218ENST00000598907 Q8N377 158 aa8.06□□□□□ -1.12
SHKBP1-218ENST00000598907 TEX49A0A1B0GTD5 131 aa8.05□□□□□ -1.12
SHKBP1-218ENST00000598907 FAM229BQ4G0N7 80 aa8.05□□□□□ -1.12
SHKBP1-218ENST00000598907 GAGE2AQ6NT46 116 aa8.05□□□□□ -1.12
SHKBP1-218ENST00000598907 DNAL4O96015 105 aa8.04□□□□□ -1.12
SHKBP1-218ENST00000598907 CRYGAP11844 174 aa8.04□□□□□ -1.12
SHKBP1-218ENST00000598907 TPRXLQ17RH7 258 aa8.04□□□□□ -1.12
SHKBP1-218ENST00000598907 PPDPFLQ8WWR9 84 aa8.04□□□□□ -1.12
SHKBP1-218ENST00000598907 ANAPC11Q9NYG5 84 aa8.04□□□□□ -1.12
SHKBP1-218ENST00000598907 SPCS1Q9Y6A9 102 aa8.04□□□□□ -1.12
SHKBP1-218ENST00000598907 SMIM29Q86T20 159 aa8.03□□□□□ -1.12
SHKBP1-218ENST00000598907 DEFB105AQ8NG35 78 aa8.03□□□□□ -1.12
SHKBP1-218ENST00000598907 ORMDL1Q9P0S3 153 aa8.02□□□□□ -1.13
SHKBP1-218ENST00000598907 IGLV7-46A0A075B6I9 117 aa8.01□□□□□ -1.13
SHKBP1-218ENST00000598907 A0A087X002 238 aa8.01□□□□□ -1.13
SHKBP1-218ENST00000598907 H3BQ85 93 aa8.01□□□□□ -1.13
SHKBP1-218ENST00000598907 K7EP34 96 aa8.01□□□□□ -1.13
SHKBP1-218ENST00000598907 GHRHP01286 108 aa8.01□□□□□ -1.13
SHKBP1-218ENST00000598907 H3BMG7 143 aa8□□□□□ -1.13
SHKBP1-218ENST00000598907 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.99□□□□□ -1.13
SHKBP1-218ENST00000598907 KRTAP13-2Q52LG2 175 aa7.99□□□□□ -1.13
SHKBP1-218ENST00000598907 TYMSOSQ8TAI1 123 aa7.99□□□□□ -1.13
SHKBP1-218ENST00000598907 TMEM256-PLSCR3K7ERE1 68 aa7.98□□□□□ -1.13
SHKBP1-218ENST00000598907 BAALC-AS2P0C853 105 aa7.98□□□□□ -1.13
SHKBP1-218ENST00000598907 C3orf22Q8N5N4 141 aa7.98□□□□□ -1.13
SHKBP1-218ENST00000598907 C9JAW5 83 aa7.97□□□□□ -1.13
SHKBP1-218ENST00000598907 UBE2V1Q13404 147 aa7.97□□□□□ -1.13
SHKBP1-218ENST00000598907 GTF2H5Q6ZYL4 71 aa7.97□□□□□ -1.13
SHKBP1-218ENST00000598907 LAMTOR3Q9UHA4 124 aa7.97□□□□□ -1.13
SHKBP1-218ENST00000598907 KRTAP4-1Q9BYQ7 146 aa7.96□□□□□ -1.14
SHKBP1-218ENST00000598907 A0A1B0GV90 55 aa7.95□□□□□ -1.14
SHKBP1-218ENST00000598907 NDUFV3P56181 108 aaKnown RBP7.95□□□□□ -1.14
SHKBP1-218ENST00000598907 PRO0461Q9UI25 63 aa7.95□□□□□ -1.14
SHKBP1-218ENST00000598907 IGLV8-61A0A075B6I0 122 aa7.94□□□□□ -1.14
SHKBP1-218ENST00000598907 H3BT86 120 aa7.94□□□□□ -1.14
SHKBP1-218ENST00000598907 IGLV9-49A0A0B4J1Y8 123 aa7.93□□□□□ -1.14
SHKBP1-218ENST00000598907 SMCPP49901 116 aaPredicted RBP7.93□□□□□ -1.14
SHKBP1-218ENST00000598907 SSBP3-AS1Q7Z2R9 100 aa7.93□□□□□ -1.14
SHKBP1-218ENST00000598907 MTURNQ8N3F0 131 aa7.92□□□□□ -1.14
SHKBP1-218ENST00000598907 MOBPQ13875 183 aa7.91□□□□□ -1.14
SHKBP1-218ENST00000598907 ANKRD29Q8N6D5 301 aa7.91□□□□□ -1.14
SHKBP1-218ENST00000598907 Q8NBF4 154 aa7.91□□□□□ -1.14
SHKBP1-218ENST00000598907 F8WEM9 126 aa7.9□□□□□ -1.14
SHKBP1-218ENST00000598907 LINC00304Q8N9R0 145 aa7.9□□□□□ -1.14
SHKBP1-218ENST00000598907 ASB16-AS1Q495Z4 193 aa7.89□□□□□ -1.15
SHKBP1-218ENST00000598907 C9orf153Q5TBE3 101 aa7.89□□□□□ -1.15
SHKBP1-218ENST00000598907 OBSCN-AS1Q96MR7 158 aa7.89□□□□□ -1.15
SHKBP1-218ENST00000598907 F8W1H4 67 aa7.88□□□□□ -1.15
SHKBP1-218ENST00000598907 Q6JHZ5 121 aa7.87□□□□□ -1.15
SHKBP1-218ENST00000598907 JMJD7-PLA2G4BH0Y9G9 81 aa7.86□□□□□ -1.15
SHKBP1-218ENST00000598907 LCE2CQ5TA81 110 aa7.86□□□□□ -1.15
SHKBP1-218ENST00000598907 IGFL1Q6UW32 110 aa7.86□□□□□ -1.15
SHKBP1-218ENST00000598907 RBM3P98179 157 aaKnown RBP7.85□□□□□ -1.15
SHKBP1-218ENST00000598907 A0A0G2JQZ4 141 aa7.84□□□□□ -1.15
SHKBP1-218ENST00000598907 TRBV7-4A0A0J9YYF1 115 aa7.84□□□□□ -1.15
SHKBP1-218ENST00000598907 MT1HP80294 61 aa7.84□□□□□ -1.15
SHKBP1-218ENST00000598907 A0A1B0GV72 72 aa7.82□□□□□ -1.16
SHKBP1-218ENST00000598907 CD164Q04900 197 aa7.82□□□□□ -1.16
SHKBP1-218ENST00000598907 SEC61BP60468 96 aaKnown RBP7.81□□□□□ -1.16
SHKBP1-218ENST00000598907 SPAG11AQ6PDA7 123 aa7.81□□□□□ -1.16
SHKBP1-218ENST00000598907 Q6Q795 121 aa7.81□□□□□ -1.16
SHKBP1-218ENST00000598907 LOC110117498A0A087WWA1 95 aa7.8□□□□□ -1.16
SHKBP1-218ENST00000598907 A0A1W2PNM2 257 aa7.8□□□□□ -1.16
SHKBP1-218ENST00000598907 LORP23490 312 aaPredicted RBP7.8□□□□□ -1.16
SHKBP1-218ENST00000598907 DSCR8Q96T75 97 aa7.8□□□□□ -1.16
SHKBP1-218ENST00000598907 KRTAP10-6P60371 365 aaPredicted RBP7.79□□□□□ -1.16
SHKBP1-218ENST00000598907 KRTAP13-3Q3SY46 172 aa7.79□□□□□ -1.16
SHKBP1-218ENST00000598907 TEN1Q86WV5 123 aa7.79□□□□□ -1.16
SHKBP1-218ENST00000598907 SPINK1P00995 79 aa7.78□□□□□ -1.16
SHKBP1-218ENST00000598907 PDE6GP18545 87 aa7.78□□□□□ -1.16
SHKBP1-218ENST00000598907 Q6ZQT0 140 aa7.78□□□□□ -1.16
SHKBP1-218ENST00000598907 C14orf132Q9NPU4 83 aa7.78□□□□□ -1.16
SHKBP1-218ENST00000598907 RPS29P62273 56 aaKnown RBP7.77□□□□□ -1.17
SHKBP1-218ENST00000598907 ETDBQ3ZM63 59 aa7.77□□□□□ -1.17
SHKBP1-218ENST00000598907 C4orf48Q5BLP8 95 aa7.77□□□□□ -1.17
SHKBP1-218ENST00000598907 HRCT1Q6UXD1 115 aa7.76□□□□□ -1.17
SHKBP1-218ENST00000598907 TRBV7-7A0A0K0K1E9 115 aa7.75□□□□□ -1.17
SHKBP1-218ENST00000598907 CCKP06307 115 aa7.75□□□□□ -1.17
SHKBP1-218ENST00000598907 KRTAP19-2Q3LHN2 52 aa7.75□□□□□ -1.17
SHKBP1-218ENST00000598907 Q5XG85 94 aa7.75□□□□□ -1.17
SHKBP1-218ENST00000598907 SSPOA2VEC9 5147 aa7.75□□□□□ -1.17
SHKBP1-218ENST00000598907 C21orf62-AS1Q17RA5 79 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms