RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 ERC2-IT1O76042 136 aa7.28□□□□□ -1.24
SHKBP1-213ENST00000597325 GHRHP01286 108 aa7.27□□□□□ -1.25
SHKBP1-213ENST00000597325 GTF2H5Q6ZYL4 71 aa7.27□□□□□ -1.25
SHKBP1-213ENST00000597325 K7EP34 96 aa7.26□□□□□ -1.25
SHKBP1-213ENST00000597325 OCIAD2Q56VL3 154 aa7.26□□□□□ -1.25
SHKBP1-213ENST00000597325 ST20-AS1Q8NBB2 130 aa7.26□□□□□ -1.25
SHKBP1-213ENST00000597325 DEFB105AQ8NG35 78 aa7.26□□□□□ -1.25
SHKBP1-213ENST00000597325 ORMDL1Q9P0S3 153 aa7.26□□□□□ -1.25
SHKBP1-213ENST00000597325 SPRR4Q96PI1 79 aa7.25□□□□□ -1.25
SHKBP1-213ENST00000597325 CRCT1Q9UGL9 99 aa7.25□□□□□ -1.25
SHKBP1-213ENST00000597325 H3BMG7 143 aa7.24□□□□□ -1.25
SHKBP1-213ENST00000597325 H3BQ85 93 aa7.24□□□□□ -1.25
SHKBP1-213ENST00000597325 GAGE2AQ6NT46 116 aa7.24□□□□□ -1.25
SHKBP1-213ENST00000597325 TEX49A0A1B0GTD5 131 aa7.23□□□□□ -1.25
SHKBP1-213ENST00000597325 C9JAW5 83 aa7.23□□□□□ -1.25
SHKBP1-213ENST00000597325 PPDPFLQ8WWR9 84 aa7.23□□□□□ -1.25
SHKBP1-213ENST00000597325 IGLV5-48A0A075B6I7 105 aa7.22□□□□□ -1.25
SHKBP1-213ENST00000597325 A0A0U1RQV1 116 aa7.21□□□□□ -1.26
SHKBP1-213ENST00000597325 A0A1B0GV90 55 aa7.21□□□□□ -1.26
SHKBP1-213ENST00000597325 TMEM256-PLSCR3K7ERE1 68 aa7.2□□□□□ -1.26
SHKBP1-213ENST00000597325 LINC00483Q53H64 154 aa7.2□□□□□ -1.26
SHKBP1-213ENST00000597325 LAMTOR3Q9UHA4 124 aa7.2□□□□□ -1.26
SHKBP1-213ENST00000597325 F8WEM9 126 aa7.19□□□□□ -1.26
SHKBP1-213ENST00000597325 BAALC-AS2P0C853 105 aa7.19□□□□□ -1.26
SHKBP1-213ENST00000597325 SPRR1BP22528 89 aa7.19□□□□□ -1.26
SHKBP1-213ENST00000597325 LINC01547P58512 204 aaPredicted RBP7.19□□□□□ -1.26
SHKBP1-213ENST00000597325 Q8N377 158 aa7.19□□□□□ -1.26
SHKBP1-213ENST00000597325 H3BT86 120 aa7.18□□□□□ -1.26
SHKBP1-213ENST00000597325 FAM229BQ4G0N7 80 aa7.18□□□□□ -1.26
SHKBP1-213ENST00000597325 MTURNQ8N3F0 131 aa7.18□□□□□ -1.26
SHKBP1-213ENST00000597325 ANAPC11Q9NYG5 84 aa7.17□□□□□ -1.26
SHKBP1-213ENST00000597325 KRTAP1-4P0C5Y4 121 aa7.16□□□□□ -1.26
SHKBP1-213ENST00000597325 CRYGAP11844 174 aa7.16□□□□□ -1.26
SHKBP1-213ENST00000597325 UBE2V1Q13404 147 aa7.16□□□□□ -1.26
SHKBP1-213ENST00000597325 C9orf153Q5TBE3 101 aa7.16□□□□□ -1.26
SHKBP1-213ENST00000597325 C3orf22Q8N5N4 141 aa7.16□□□□□ -1.26
SHKBP1-213ENST00000597325 ANKRD29Q8N6D5 301 aa7.16□□□□□ -1.26
SHKBP1-213ENST00000597325 LINC01600Q96MT4 127 aa7.16□□□□□ -1.26
SHKBP1-213ENST00000597325 IGLV9-49A0A0B4J1Y8 123 aa7.15□□□□□ -1.26
SHKBP1-213ENST00000597325 NDUFV3P56181 108 aaKnown RBP7.15□□□□□ -1.26
SHKBP1-213ENST00000597325 LCE2DQ5TA82 110 aaPredicted RBP7.14□□□□□ -1.27
SHKBP1-213ENST00000597325 F8W1H4 67 aa7.13□□□□□ -1.27
SHKBP1-213ENST00000597325 MOBPQ13875 183 aa7.13□□□□□ -1.27
SHKBP1-213ENST00000597325 SMIM29Q86T20 159 aa7.13□□□□□ -1.27
SHKBP1-213ENST00000597325 Q8NBF4 154 aa7.13□□□□□ -1.27
SHKBP1-213ENST00000597325 PRO0461Q9UI25 63 aa7.13□□□□□ -1.27
SHKBP1-213ENST00000597325 A0A087X002 238 aa7.12□□□□□ -1.27
SHKBP1-213ENST00000597325 A0A1B0GV72 72 aa7.12□□□□□ -1.27
SHKBP1-213ENST00000597325 KRTAP10-8P60410 259 aa7.12□□□□□ -1.27
SHKBP1-213ENST00000597325 JMJD7-PLA2G4BH0Y9G9 81 aa7.1□□□□□ -1.27
SHKBP1-213ENST00000597325 SMCPP49901 116 aaPredicted RBP7.1□□□□□ -1.27
SHKBP1-213ENST00000597325 PRR26Q8N8Z3 221 aa7.1□□□□□ -1.27
SHKBP1-213ENST00000597325 TYMSOSQ8TAI1 123 aa7.1□□□□□ -1.27
SHKBP1-213ENST00000597325 Q6JHZ5 121 aa7.09□□□□□ -1.27
SHKBP1-213ENST00000597325 IGLV8-61A0A075B6I0 122 aa7.08□□□□□ -1.28
SHKBP1-213ENST00000597325 RBM3P98179 157 aaKnown RBP7.08□□□□□ -1.28
SHKBP1-213ENST00000597325 KRTAP13-2Q52LG2 175 aa7.08□□□□□ -1.28
SHKBP1-213ENST00000597325 DSCR8Q96T75 97 aa7.08□□□□□ -1.28
SHKBP1-213ENST00000597325 SSBP3-AS1Q7Z2R9 100 aa7.07□□□□□ -1.28
SHKBP1-213ENST00000597325 IGFL1Q6UW32 110 aa7.05□□□□□ -1.28
SHKBP1-213ENST00000597325 TEN1Q86WV5 123 aa7.05□□□□□ -1.28
SHKBP1-213ENST00000597325 C14orf132Q9NPU4 83 aa7.05□□□□□ -1.28
SHKBP1-213ENST00000597325 ETDBQ3ZM63 59 aa7.04□□□□□ -1.28
SHKBP1-213ENST00000597325 OBSCN-AS1Q96MR7 158 aa7.04□□□□□ -1.28
SHKBP1-213ENST00000597325 PDE6GP18545 87 aa7.03□□□□□ -1.28
SHKBP1-213ENST00000597325 C21orf62-AS1Q17RA5 79 aa7.03□□□□□ -1.28
SHKBP1-213ENST00000597325 C4orf48Q5BLP8 95 aa7.03□□□□□ -1.28
SHKBP1-213ENST00000597325 LOC110117498A0A087WWA1 95 aa7.02□□□□□ -1.29
SHKBP1-213ENST00000597325 TRBV7-4A0A0J9YYF1 115 aa7.02□□□□□ -1.29
SHKBP1-213ENST00000597325 LINC00304Q8N9R0 145 aa7.02□□□□□ -1.29
SHKBP1-213ENST00000597325 A0A0G2JQZ4 141 aa7.01□□□□□ -1.29
SHKBP1-213ENST00000597325 VPS25Q9BRG1 176 aa7.01□□□□□ -1.29
SHKBP1-213ENST00000597325 CCKP06307 115 aa7□□□□□ -1.29
SHKBP1-213ENST00000597325 HRCT1Q6UXD1 115 aa7□□□□□ -1.29
SHKBP1-213ENST00000597325 Q6ZQT0 140 aa7□□□□□ -1.29
SHKBP1-213ENST00000597325 CD164Q04900 197 aa6.99□□□□□ -1.29
SHKBP1-213ENST00000597325 SPAG11AQ6PDA7 123 aa6.99□□□□□ -1.29
SHKBP1-213ENST00000597325 A0A1W2PNM2 257 aa6.97□□□□□ -1.29
SHKBP1-213ENST00000597325 Q6Q795 121 aa6.97□□□□□ -1.29
SHKBP1-213ENST00000597325 TRBV7-7A0A0K0K1E9 115 aa6.96□□□□□ -1.3
SHKBP1-213ENST00000597325 SPINK1P00995 79 aa6.96□□□□□ -1.3
SHKBP1-213ENST00000597325 LIMD2Q9BT23 127 aa6.96□□□□□ -1.3
SHKBP1-213ENST00000597325 MUC17Q685J3 4493 aa6.95□□□□□ -1.3
SHKBP1-213ENST00000597325 SS18L2Q9UHA2 77 aa6.94□□□□□ -1.3
SHKBP1-213ENST00000597325 A0A087WSZ3 146 aa6.93□□□□□ -1.3
SHKBP1-213ENST00000597325 A0A1B0GW54 56 aa6.93□□□□□ -1.3
SHKBP1-213ENST00000597325 KRTAP9-7A8MTY7 169 aa6.93□□□□□ -1.3
SHKBP1-213ENST00000597325 RPS29P62273 56 aaKnown RBP6.93□□□□□ -1.3
SHKBP1-213ENST00000597325 J3QR89 54 aa6.91□□□□□ -1.3
SHKBP1-213ENST00000597325 Q5XG85 94 aa6.88□□□□□ -1.31
SHKBP1-213ENST00000597325 ACYP1P07311 99 aa6.87□□□□□ -1.31
SHKBP1-213ENST00000597325 FAM240AA0A1B0GVK7 77 aa6.86□□□□□ -1.31
SHKBP1-213ENST00000597325 NREPQ16612 68 aa6.85□□□□□ -1.31
SHKBP1-213ENST00000597325 ASB16-AS1Q495Z4 193 aa6.85□□□□□ -1.31
SHKBP1-213ENST00000597325 UBL5Q9BZL1 73 aa6.85□□□□□ -1.31
SHKBP1-213ENST00000597325 K7ERU9 68 aa6.83□□□□□ -1.32
SHKBP1-213ENST00000597325 LINC00846Q9NV44 126 aa6.83□□□□□ -1.32
SHKBP1-213ENST00000597325 C1orf195Q5TG92 126 aa6.81□□□□□ -1.32
SHKBP1-213ENST00000597325 Q6ZVQ6 151 aa6.81□□□□□ -1.32
SHKBP1-213ENST00000597325 RETNLBQ9BQ08 111 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms