RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 PRO1854Q9UHT4 67 aa6.21□□□□□ -1.42
LIG1-210ENST00000596332 TSPAN13O95857 204 aa6.2□□□□□ -1.42
LIG1-210ENST00000596332 PSMB2P49721 201 aa6.2□□□□□ -1.42
LIG1-210ENST00000596332 FAM229BQ4G0N7 80 aa6.2□□□□□ -1.42
LIG1-210ENST00000596332 LINC00575Q6W349 94 aa6.2□□□□□ -1.42
LIG1-210ENST00000596332 PRO0461Q9UI25 63 aa6.2□□□□□ -1.42
LIG1-210ENST00000596332 SCGB1C2P0DMR2 95 aa6.19□□□□□ -1.42
LIG1-210ENST00000596332 SPRR1BP22528 89 aa6.19□□□□□ -1.42
LIG1-210ENST00000596332 ETDBQ3ZM63 59 aa6.19□□□□□ -1.42
LIG1-210ENST00000596332 C3orf22Q8N5N4 141 aa6.19□□□□□ -1.42
LIG1-210ENST00000596332 DHRS4-AS1Q9P1J3 65 aa6.19□□□□□ -1.42
LIG1-210ENST00000596332 H7C2G1 150 aa6.18□□□□□ -1.42
LIG1-210ENST00000596332 PPDPFLQ8WWR9 84 aa6.18□□□□□ -1.42
LIG1-210ENST00000596332 FAM218AQ96MZ4 157 aa6.18□□□□□ -1.42
LIG1-210ENST00000596332 IGLV5-48A0A075B6I7 105 aa6.17□□□□□ -1.42
LIG1-210ENST00000596332 CRYGAP11844 174 aa6.17□□□□□ -1.42
LIG1-210ENST00000596332 GAGE2AQ6NT46 116 aa6.17□□□□□ -1.42
LIG1-210ENST00000596332 SMIM29Q86T20 159 aa6.17□□□□□ -1.42
LIG1-210ENST00000596332 TEN1Q86WV5 123 aa6.17□□□□□ -1.42
LIG1-210ENST00000596332 MTURNQ8N3F0 131 aa6.17□□□□□ -1.42
LIG1-210ENST00000596332 TRIAP1O43715 76 aa6.15□□□□□ -1.42
LIG1-210ENST00000596332 COX6CP09669 75 aa6.15□□□□□ -1.42
LIG1-210ENST00000596332 ATXN8Q156A1 80 aa6.15□□□□□ -1.42
LIG1-210ENST00000596332 Q8N377 158 aa6.15□□□□□ -1.42
LIG1-210ENST00000596332 ZNF706Q9Y5V0 76 aaPredicted RBP6.15□□□□□ -1.42
LIG1-210ENST00000596332 HMCN2Q8NDA2 5059 aa6.14□□□□□ -1.43
LIG1-210ENST00000596332 TCL1BO95988 128 aa6.14□□□□□ -1.43
LIG1-210ENST00000596332 A0A1B0GV72 72 aa6.13□□□□□ -1.43
LIG1-210ENST00000596332 hADV29S1A0JD25 119 aa6.13□□□□□ -1.43
LIG1-210ENST00000596332 Q1RN00 199 aa6.13□□□□□ -1.43
LIG1-210ENST00000596332 TYMSOSQ8TAI1 123 aa6.13□□□□□ -1.43
LIG1-210ENST00000596332 H0YGX0 51 aa6.11□□□□□ -1.43
LIG1-210ENST00000596332 SLC25A20O43772 301 aa6.11□□□□□ -1.43
LIG1-210ENST00000596332 TEX49A0A1B0GTD5 131 aa6.1□□□□□ -1.43
LIG1-210ENST00000596332 Q6ZQY7 126 aa6.1□□□□□ -1.43
LIG1-210ENST00000596332 ANKRD29Q8N6D5 301 aa6.1□□□□□ -1.43
LIG1-210ENST00000596332 DEFB105AQ8NG35 78 aa6.1□□□□□ -1.43
LIG1-210ENST00000596332 CLEC2BQ92478 149 aa6.1□□□□□ -1.43
LIG1-210ENST00000596332 C9JAW5 83 aa6.09□□□□□ -1.43
LIG1-210ENST00000596332 H3BT86 120 aa6.09□□□□□ -1.43
LIG1-210ENST00000596332 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.09□□□□□ -1.43
LIG1-210ENST00000596332 SSBP3-AS1Q7Z2R9 100 aa6.09□□□□□ -1.43
LIG1-210ENST00000596332 IGLV9-49A0A0B4J1Y8 123 aa6.08□□□□□ -1.44
LIG1-210ENST00000596332 MOBPQ13875 183 aa6.08□□□□□ -1.44
LIG1-210ENST00000596332 Q8NBF4 154 aa6.08□□□□□ -1.44
LIG1-210ENST00000596332 A0A0G2JQZ4 141 aa6.07□□□□□ -1.44
LIG1-210ENST00000596332 A0A1B0GX51 115 aa6.07□□□□□ -1.44
LIG1-210ENST00000596332 CDIP1Q9H305 208 aa6.07□□□□□ -1.44
LIG1-210ENST00000596332 LINC00304Q8N9R0 145 aa6.06□□□□□ -1.44
LIG1-210ENST00000596332 IGLV8-61A0A075B6I0 122 aa6.05□□□□□ -1.44
LIG1-210ENST00000596332 LST1O00453 97 aa6.04□□□□□ -1.44
LIG1-210ENST00000596332 LAMTOR3Q9UHA4 124 aa6.04□□□□□ -1.44
LIG1-210ENST00000596332 FAM240AA0A1B0GVK7 77 aa6.03□□□□□ -1.44
LIG1-210ENST00000596332 SNCGO76070 127 aa6.03□□□□□ -1.44
LIG1-210ENST00000596332 Q6Q795 121 aa6.03□□□□□ -1.44
LIG1-210ENST00000596332 ACYP1P07311 99 aa6.02□□□□□ -1.45
LIG1-210ENST00000596332 TRACP01848 142 aa6.01□□□□□ -1.45
LIG1-210ENST00000596332 MT-ATP8P03928 68 aa6.01□□□□□ -1.45
LIG1-210ENST00000596332 C9orf153Q5TBE3 101 aa6.01□□□□□ -1.45
LIG1-210ENST00000596332 SPAG11AQ6PDA7 123 aa6.01□□□□□ -1.45
LIG1-210ENST00000596332 SPINK1P00995 79 aa6□□□□□ -1.45
LIG1-210ENST00000596332 LPAP08519 4548 aa6□□□□□ -1.45
LIG1-210ENST00000596332 NDUFV3P56181 108 aaKnown RBP5.99□□□□□ -1.45
LIG1-210ENST00000596332 RPS29P62273 56 aaKnown RBP5.99□□□□□ -1.45
LIG1-210ENST00000596332 IGFL1Q6UW32 110 aa5.99□□□□□ -1.45
LIG1-210ENST00000596332 LRP2P98164 4655 aa5.99□□□□□ -1.45
LIG1-210ENST00000596332 RETNLBQ9BQ08 111 aa5.98□□□□□ -1.45
LIG1-210ENST00000596332 CD164Q04900 197 aa5.97□□□□□ -1.45
LIG1-210ENST00000596332 ANAPC13Q9BS18 74 aa5.97□□□□□ -1.45
LIG1-210ENST00000596332 HRCT1Q6UXD1 115 aa5.96□□□□□ -1.46
LIG1-210ENST00000596332 ORMDL1Q9P0S3 153 aa5.96□□□□□ -1.46
LIG1-210ENST00000596332 Q5XG85 94 aa5.95□□□□□ -1.46
LIG1-210ENST00000596332 IMUPQ9GZP8 106 aa5.95□□□□□ -1.46
LIG1-210ENST00000596332 H3BS24 57 aa5.94□□□□□ -1.46
LIG1-210ENST00000596332 TMEM256-PLSCR3K7ERE1 68 aa5.94□□□□□ -1.46
LIG1-210ENST00000596332 BAALC-AS2P0C853 105 aa5.94□□□□□ -1.46
LIG1-210ENST00000596332 Q6JHZ5 121 aa5.94□□□□□ -1.46
LIG1-210ENST00000596332 TRBV7-7A0A0K0K1E9 115 aa5.92□□□□□ -1.46
LIG1-210ENST00000596332 A0A1W2PNM2 257 aa5.92□□□□□ -1.46
LIG1-210ENST00000596332 F8WEM9 126 aa5.92□□□□□ -1.46
LIG1-210ENST00000596332 DNAL4O96015 105 aa5.92□□□□□ -1.46
LIG1-210ENST00000596332 H3BQ85 93 aa5.91□□□□□ -1.46
LIG1-210ENST00000596332 PRR4Q16378 134 aa5.91□□□□□ -1.46
LIG1-210ENST00000596332 LINC00643Q86TS7 51 aa5.91□□□□□ -1.46
LIG1-210ENST00000596332 TRBV7-4A0A0J9YYF1 115 aa5.9□□□□□ -1.46
LIG1-210ENST00000596332 C1orf195Q5TG92 126 aa5.9□□□□□ -1.46
LIG1-210ENST00000596332 UBR4Q5T4S7 5183 aa5.9□□□□□ -1.47
LIG1-210ENST00000596332 OBSCN-AS1Q96MR7 158 aa5.89□□□□□ -1.47
LIG1-210ENST00000596332 IGLV7-46A0A075B6I9 117 aa5.88□□□□□ -1.47
LIG1-210ENST00000596332 ASB16-AS1Q495Z4 193 aa5.88□□□□□ -1.47
LIG1-210ENST00000596332 KRTAP13-3Q3SY46 172 aa5.87□□□□□ -1.47
LIG1-210ENST00000596332 FP248Q71RG6 208 aaPredicted RBP5.87□□□□□ -1.47
LIG1-210ENST00000596332 TPRXLQ17RH7 258 aa5.86□□□□□ -1.47
LIG1-210ENST00000596332 Q96NJ1 140 aa5.86□□□□□ -1.47
LIG1-210ENST00000596332 LIMD2Q9BT23 127 aa5.86□□□□□ -1.47
LIG1-210ENST00000596332 RBM3P98179 157 aaKnown RBP5.84□□□□□ -1.47
LIG1-210ENST00000596332 JMJD7-PLA2G4BH0Y9G9 81 aa5.83□□□□□ -1.48
LIG1-210ENST00000596332 Q6ZQT0 140 aa5.83□□□□□ -1.48
LIG1-210ENST00000596332 A0A087WSZ3 146 aa5.82□□□□□ -1.48
LIG1-210ENST00000596332 LOC110117498A0A087WWA1 95 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 126.6 ms