RNA–Protein interactions for RNA: ENST00000595101.5

USE1-206, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2 BASIC

Gene USE1, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-206ENST00000595101 GAGE2AQ6NT46 116 aa8.98□□□□□ -0.97
USE1-206ENST00000595101 LPAP08519 4548 aa8.97□□□□□ -0.97
USE1-206ENST00000595101 C6orf99Q4VX62 202 aa8.97□□□□□ -0.97
USE1-206ENST00000595101 Q5XG85 94 aa8.97□□□□□ -0.97
USE1-206ENST00000595101 ST20-AS1Q8NBB2 130 aa8.97□□□□□ -0.97
USE1-206ENST00000595101 COPS9Q8WXC6 57 aa8.97□□□□□ -0.97
USE1-206ENST00000595101 HIGD1BQ9P298 99 aa8.95□□□□□ -0.98
USE1-206ENST00000595101 ZNF706Q9Y5V0 76 aaPredicted RBP8.95□□□□□ -0.98
USE1-206ENST00000595101 UQCRQO14949 82 aa8.94□□□□□ -0.98
USE1-206ENST00000595101 LINC00483Q53H64 154 aa8.94□□□□□ -0.98
USE1-206ENST00000595101 HRCT1Q6UXD1 115 aa8.94□□□□□ -0.98
USE1-206ENST00000595101 ELOF1P60002 83 aaKnown RBP8.93□□□□□ -0.98
USE1-206ENST00000595101 TMEM258P61165 79 aa8.93□□□□□ -0.98
USE1-206ENST00000595101 C2orf91Q6ZV80 131 aa8.93□□□□□ -0.98
USE1-206ENST00000595101 HIST1H4GQ99525 98 aa8.93□□□□□ -0.98
USE1-206ENST00000595101 SNCGO76070 127 aa8.92□□□□□ -0.98
USE1-206ENST00000595101 COX7BP24311 80 aa8.92□□□□□ -0.98
USE1-206ENST00000595101 SMIM11BQ8TCY0 68 aa8.92□□□□□ -0.98
USE1-206ENST00000595101 TRAV13-2A0A0B4J235 113 aa8.91□□□□□ -0.98
USE1-206ENST00000595101 LINC00304Q8N9R0 145 aa8.91□□□□□ -0.98
USE1-206ENST00000595101 PPDPFLQ8WWR9 84 aa8.91□□□□□ -0.98
USE1-206ENST00000595101 RAB37Q96AX2 223 aa8.91□□□□□ -0.98
USE1-206ENST00000595101 IGLV9-49A0A0B4J1Y8 123 aa8.89□□□□□ -0.99
USE1-206ENST00000595101 FAM236DA0A1B0GTK5 79 aa8.89□□□□□ -0.99
USE1-206ENST00000595101 FAM236CP0DP71 79 aa8.89□□□□□ -0.99
USE1-206ENST00000595101 ETDBQ3ZM63 59 aa8.89□□□□□ -0.99
USE1-206ENST00000595101 PRO0461Q9UI25 63 aa8.89□□□□□ -0.99
USE1-206ENST00000595101 C9orf153Q5TBE3 101 aa8.88□□□□□ -0.99
USE1-206ENST00000595101 DHRS4-AS1Q9P1J3 65 aa8.88□□□□□ -0.99
USE1-206ENST00000595101 MOBPQ13875 183 aa8.87□□□□□ -0.99
USE1-206ENST00000595101 Q8NBF4 154 aa8.87□□□□□ -0.99
USE1-206ENST00000595101 RETNLBQ9BQ08 111 aa8.86□□□□□ -0.99
USE1-206ENST00000595101 TRBV20-1A0A075B6N2 111 aa8.86□□□□□ -0.99
USE1-206ENST00000595101 TRBV7-6A0A0J9YX20 115 aa8.86□□□□□ -0.99
USE1-206ENST00000595101 PRR4Q16378 134 aa8.86□□□□□ -0.99
USE1-206ENST00000595101 IMUPQ9GZP8 106 aa8.86□□□□□ -0.99
USE1-206ENST00000595101 A0A1B0GWB2 263 aa8.85□□□□□ -0.99
USE1-206ENST00000595101 CFC1BP0CG36 223 aa8.84□□□□□ -0.99
USE1-206ENST00000595101 CFC1P0CG37 223 aa8.84□□□□□ -0.99
USE1-206ENST00000595101 CEND1Q8N111 149 aa8.84□□□□□ -0.99
USE1-206ENST00000595101 DEFB105AQ8NG35 78 aa8.84□□□□□ -0.99
USE1-206ENST00000595101 RNF213Q63HN8 5207 aa8.84□□□□□ -0.99
USE1-206ENST00000595101 PMAIP1Q13794 54 aa8.84□□□□□ -1
USE1-206ENST00000595101 LAMTOR3Q9UHA4 124 aa8.82□□□□□ -1
USE1-206ENST00000595101 SPRR1BP22528 89 aa8.81□□□□□ -1
USE1-206ENST00000595101 LINC01547P58512 204 aaPredicted RBP8.81□□□□□ -1
USE1-206ENST00000595101 H7C2G1 150 aa8.81□□□□□ -1
USE1-206ENST00000595101 FXYD2P54710 66 aa8.8□□□□□ -1
USE1-206ENST00000595101 TEN1Q86WV5 123 aa8.8□□□□□ -1
USE1-206ENST00000595101 TRBV7-7A0A0K0K1E9 115 aa8.79□□□□□ -1
USE1-206ENST00000595101 FAM236AA0A1B0GUQ0 79 aa8.79□□□□□ -1
USE1-206ENST00000595101 FAM236BA0A1B0GV22 79 aa8.79□□□□□ -1
USE1-206ENST00000595101 Q1RN00 199 aa8.79□□□□□ -1
USE1-206ENST00000595101 LINC00575Q6W349 94 aa8.78□□□□□ -1
USE1-206ENST00000595101 SSBP3-AS1Q7Z2R9 100 aa8.78□□□□□ -1
USE1-206ENST00000595101 ANKRD29Q8N6D5 301 aa8.78□□□□□ -1
USE1-206ENST00000595101 LYRM7Q5U5X0 104 aa8.78□□□□□ -1
USE1-206ENST00000595101 SMIM29Q86T20 159 aa8.78□□□□□ -1
USE1-206ENST00000595101 SPAG11AQ6PDA7 123 aa8.77□□□□□ -1.01
USE1-206ENST00000595101 TEX49A0A1B0GTD5 131 aa8.76□□□□□ -1.01
USE1-206ENST00000595101 IGLV5-48A0A075B6I7 105 aa8.76□□□□□ -1.01
USE1-206ENST00000595101 A0A0B4J2C4 111 aa8.76□□□□□ -1.01
USE1-206ENST00000595101 A0A0U1RQV1 116 aa8.76□□□□□ -1.01
USE1-206ENST00000595101 Q8N377 158 aa8.76□□□□□ -1.01
USE1-206ENST00000595101 TRACP01848 142 aa8.74□□□□□ -1.01
USE1-206ENST00000595101 COX7CP15954 63 aa8.74□□□□□ -1.01
USE1-206ENST00000595101 NHP2Q9NX24 153 aaKnown RBP8.74□□□□□ -1.01
USE1-206ENST00000595101 A0A0G2JQZ4 141 aa8.73□□□□□ -1.01
USE1-206ENST00000595101 hADV29S1A0JD25 119 aa8.73□□□□□ -1.01
USE1-206ENST00000595101 SPINK1P00995 79 aa8.73□□□□□ -1.01
USE1-206ENST00000595101 Q6ZQY7 126 aa8.73□□□□□ -1.01
USE1-206ENST00000595101 SLC25A20O43772 301 aa8.72□□□□□ -1.01
USE1-206ENST00000595101 K7ERJ3 54 aa8.71□□□□□ -1.01
USE1-206ENST00000595101 PRO1854Q9UHT4 67 aa8.71□□□□□ -1.01
USE1-206ENST00000595101 FAM218AQ96MZ4 157 aa8.71□□□□□ -1.02
USE1-206ENST00000595101 IGLV7-46A0A075B6I9 117 aa8.69□□□□□ -1.02
USE1-206ENST00000595101 FAM240AA0A1B0GVK7 77 aa8.69□□□□□ -1.02
USE1-206ENST00000595101 MUC2Q02817 5179 aa8.67□□□□□ -1.02
USE1-206ENST00000595101 H3BS24 57 aa8.67□□□□□ -1.02
USE1-206ENST00000595101 SMCPP49901 116 aaPredicted RBP8.67□□□□□ -1.02
USE1-206ENST00000595101 TRIAP1O43715 76 aa8.66□□□□□ -1.02
USE1-206ENST00000595101 RPS29P62273 56 aaKnown RBP8.66□□□□□ -1.02
USE1-206ENST00000595101 PRR15Q8IV56 129 aa8.66□□□□□ -1.02
USE1-206ENST00000595101 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.65□□□□□ -1.02
USE1-206ENST00000595101 SMIM26A0A096LP01 95 aa8.64□□□□□ -1.03
USE1-206ENST00000595101 SERP1Q9Y6X1 66 aa8.64□□□□□ -1.03
USE1-206ENST00000595101 H0YGX0 51 aa8.63□□□□□ -1.03
USE1-206ENST00000595101 TPRXLQ17RH7 258 aa8.62□□□□□ -1.03
USE1-206ENST00000595101 CLEC2BQ92478 149 aa8.62□□□□□ -1.03
USE1-206ENST00000595101 ATOX1O00244 68 aa8.61□□□□□ -1.03
USE1-206ENST00000595101 SCGB1C2P0DMR2 95 aa8.61□□□□□ -1.03
USE1-206ENST00000595101 PSMB2P49721 201 aa8.61□□□□□ -1.03
USE1-206ENST00000595101 FP248Q71RG6 208 aaPredicted RBP8.61□□□□□ -1.03
USE1-206ENST00000595101 F8WEM9 126 aa8.58□□□□□ -1.04
USE1-206ENST00000595101 COX6CP09669 75 aa8.58□□□□□ -1.04
USE1-206ENST00000595101 KRTAP13-3Q3SY46 172 aa8.58□□□□□ -1.04
USE1-206ENST00000595101 IGLV8-61A0A075B6I0 122 aa8.57□□□□□ -1.04
USE1-206ENST00000595101 IGFL1Q6UW32 110 aa8.57□□□□□ -1.04
USE1-206ENST00000595101 H3BT86 120 aa8.56□□□□□ -1.04
USE1-206ENST00000595101 ACYP1P07311 99 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms