RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 CFC1P0CG37 223 aa9.65□□□□□ -0.86
IRF3-208ENST00000594387 TCL1BO95988 128 aa9.64□□□□□ -0.87
IRF3-208ENST00000594387 Q6JHZ5 121 aa9.64□□□□□ -0.87
IRF3-208ENST00000594387 PPDPFLQ8WWR9 84 aa9.64□□□□□ -0.87
IRF3-208ENST00000594387 SNHG12Q9BXW3 62 aa9.64□□□□□ -0.87
IRF3-208ENST00000594387 A0A0B4J2C4 111 aa9.63□□□□□ -0.87
IRF3-208ENST00000594387 H0YGX0 51 aa9.63□□□□□ -0.87
IRF3-208ENST00000594387 ASB16-AS1Q495Z4 193 aa9.63□□□□□ -0.87
IRF3-208ENST00000594387 Q5XG85 94 aa9.63□□□□□ -0.87
IRF3-208ENST00000594387 CEND1Q8N111 149 aa9.62□□□□□ -0.87
IRF3-208ENST00000594387 A0A0G2JQZ4 141 aa9.61□□□□□ -0.87
IRF3-208ENST00000594387 GHRHP01286 108 aa9.6□□□□□ -0.87
IRF3-208ENST00000594387 OCIAD2Q56VL3 154 aa9.6□□□□□ -0.87
IRF3-208ENST00000594387 C2orf91Q6ZV80 131 aa9.6□□□□□ -0.87
IRF3-208ENST00000594387 PRO1854Q9UHT4 67 aa9.59□□□□□ -0.87
IRF3-208ENST00000594387 XP32Q5T750 250 aa9.58□□□□□ -0.88
IRF3-208ENST00000594387 CLEC2BQ92478 149 aa9.58□□□□□ -0.88
IRF3-208ENST00000594387 C9orf92A6NGG3 77 aa9.57□□□□□ -0.88
IRF3-208ENST00000594387 C1orf195Q5TG92 126 aa9.56□□□□□ -0.88
IRF3-208ENST00000594387 TMA7Q9Y2S6 64 aaKnown RBP9.56□□□□□ -0.88
IRF3-208ENST00000594387 IGLV8-61A0A075B6I0 122 aa9.55□□□□□ -0.88
IRF3-208ENST00000594387 PYY3Q5JQD4 70 aa9.54□□□□□ -0.88
IRF3-208ENST00000594387 IGFL1Q6UW32 110 aa9.54□□□□□ -0.88
IRF3-208ENST00000594387 A0A1B0GX51 115 aa9.52□□□□□ -0.89
IRF3-208ENST00000594387 HSD52Q0P140 79 aa9.52□□□□□ -0.89
IRF3-208ENST00000594387 TRBV7-7A0A0K0K1E9 115 aa9.51□□□□□ -0.89
IRF3-208ENST00000594387 FXYD2P54710 66 aa9.51□□□□□ -0.89
IRF3-208ENST00000594387 PSMB2P49721 201 aa9.5□□□□□ -0.89
IRF3-208ENST00000594387 UQCR10Q9UDW1 63 aa9.49□□□□□ -0.89
IRF3-208ENST00000594387 MUC2Q02817 5179 aa9.49□□□□□ -0.89
IRF3-208ENST00000594387 H3BUT2 72 aa9.48□□□□□ -0.89
IRF3-208ENST00000594387 COX6CP09669 75 aa9.48□□□□□ -0.89
IRF3-208ENST00000594387 FABP2P12104 132 aa9.48□□□□□ -0.89
IRF3-208ENST00000594387 NDUFV3P56181 108 aaKnown RBP9.48□□□□□ -0.89
IRF3-208ENST00000594387 FAM218AQ96MZ4 157 aa9.48□□□□□ -0.89
IRF3-208ENST00000594387 DNAL4O96015 105 aa9.47□□□□□ -0.89
IRF3-208ENST00000594387 MUC17Q685J3 4493 aa9.46□□□□□ -0.89
IRF3-208ENST00000594387 LST1O00453 97 aa9.45□□□□□ -0.9
IRF3-208ENST00000594387 TRIAP1O43715 76 aa9.45□□□□□ -0.9
IRF3-208ENST00000594387 SS18L2Q9UHA2 77 aa9.45□□□□□ -0.9
IRF3-208ENST00000594387 H3BMG7 143 aa9.44□□□□□ -0.9
IRF3-208ENST00000594387 H3BQ85 93 aa9.44□□□□□ -0.9
IRF3-208ENST00000594387 PCOTHQ58A44 107 aa9.43□□□□□ -0.9
IRF3-208ENST00000594387 TEN1Q86WV5 123 aa9.43□□□□□ -0.9
IRF3-208ENST00000594387 ORMDL1Q9P0S3 153 aa9.41□□□□□ -0.9
IRF3-208ENST00000594387 Q6Q795 121 aa9.4□□□□□ -0.9
IRF3-208ENST00000594387 KRTAP4-1Q9BYQ7 146 aa9.4□□□□□ -0.9
IRF3-208ENST00000594387 K7ERJ3 54 aa9.39□□□□□ -0.91
IRF3-208ENST00000594387 LCE2AQ5TA79 106 aaPredicted RBP9.38□□□□□ -0.91
IRF3-208ENST00000594387 TMEM256-PLSCR3K7ERE1 68 aa9.37□□□□□ -0.91
IRF3-208ENST00000594387 SCGB1C2P0DMR2 95 aa9.37□□□□□ -0.91
IRF3-208ENST00000594387 RPL37P61927 97 aaKnown RBP9.36□□□□□ -0.91
IRF3-208ENST00000594387 ANKRD29Q8N6D5 301 aa9.35□□□□□ -0.91
IRF3-208ENST00000594387 A0A087WSZ3 146 aa9.34□□□□□ -0.91
IRF3-208ENST00000594387 OBSCN-AS1Q96MR7 158 aa9.31□□□□□ -0.92
IRF3-208ENST00000594387 M0R143 59 aa9.29□□□□□ -0.92
IRF3-208ENST00000594387 TRACP01848 142 aa9.29□□□□□ -0.92
IRF3-208ENST00000594387 ATP11AUNQ6ZP68 121 aa9.29□□□□□ -0.92
IRF3-208ENST00000594387 A0A1B0GV72 72 aa9.28□□□□□ -0.92
IRF3-208ENST00000594387 FAT4Q6V0I7 4981 aa9.28□□□□□ -0.92
IRF3-208ENST00000594387 UBE2V1Q13404 147 aa9.27□□□□□ -0.93
IRF3-208ENST00000594387 Q96NJ1 140 aa9.27□□□□□ -0.93
IRF3-208ENST00000594387 TRBV7-4A0A0J9YYF1 115 aa9.26□□□□□ -0.93
IRF3-208ENST00000594387 A0A1W2PNM2 257 aa9.26□□□□□ -0.93
IRF3-208ENST00000594387 CCKP06307 115 aa9.24□□□□□ -0.93
IRF3-208ENST00000594387 Q75L30 129 aa9.24□□□□□ -0.93
IRF3-208ENST00000594387 SIGMAR1Q99720 223 aa9.23□□□□□ -0.93
IRF3-208ENST00000594387 SMIM6P0DI80 62 aa9.22□□□□□ -0.93
IRF3-208ENST00000594387 RBM3P98179 157 aaKnown RBP9.22□□□□□ -0.93
IRF3-208ENST00000594387 DSCR8Q96T75 97 aa9.21□□□□□ -0.94
IRF3-208ENST00000594387 IGKV4-1P06312 121 aa9.2□□□□□ -0.94
IRF3-208ENST00000594387 VPS25Q9BRG1 176 aa9.2□□□□□ -0.94
IRF3-208ENST00000594387 BAALC-AS2P0C853 105 aa9.19□□□□□ -0.94
IRF3-208ENST00000594387 ATXN8Q156A1 80 aa9.18□□□□□ -0.94
IRF3-208ENST00000594387 COX6B2Q6YFQ2 88 aa9.18□□□□□ -0.94
IRF3-208ENST00000594387 TSTD3H0UI37 97 aa9.17□□□□□ -0.94
IRF3-208ENST00000594387 C21orf62-AS1Q17RA5 79 aa9.17□□□□□ -0.94
IRF3-208ENST00000594387 LINC00313P59037 77 aa9.16□□□□□ -0.94
IRF3-208ENST00000594387 C9JAW5 83 aa9.15□□□□□ -0.94
IRF3-208ENST00000594387 LYRM7Q5U5X0 104 aa9.15□□□□□ -0.94
IRF3-208ENST00000594387 DSCR10P59022 87 aa9.14□□□□□ -0.95
IRF3-208ENST00000594387 KRTAP9-2Q9BYQ4 174 aa9.14□□□□□ -0.95
IRF3-208ENST00000594387 LCE2CQ5TA81 110 aa9.13□□□□□ -0.95
IRF3-208ENST00000594387 C20orf166-AS1Q96NR2 134 aa9.13□□□□□ -0.95
IRF3-208ENST00000594387 A8MUU9 505 aa9.11□□□□□ -0.95
IRF3-208ENST00000594387 JMJD7-PLA2G4BH0Y9G9 81 aa9.11□□□□□ -0.95
IRF3-208ENST00000594387 DEFB116Q30KQ4 102 aa9.11□□□□□ -0.95
IRF3-208ENST00000594387 NAA38Q9BRA0 125 aaKnown RBP9.11□□□□□ -0.95
IRF3-208ENST00000594387 KRTAP19-2Q3LHN2 52 aa9.1□□□□□ -0.95
IRF3-208ENST00000594387 LINC00472Q9H8W2 130 aa9.1□□□□□ -0.95
IRF3-208ENST00000594387 BATFQ16520 125 aa9.09□□□□□ -0.95
IRF3-208ENST00000594387 M0R2T5 61 aa9.08□□□□□ -0.96
IRF3-208ENST00000594387 IGHV6-1A0A0B4J1U7 121 aa9.07□□□□□ -0.96
IRF3-208ENST00000594387 MT1HP80294 61 aa9.07□□□□□ -0.96
IRF3-208ENST00000594387 TRBV20-1A0A075B6N2 111 aa9.06□□□□□ -0.96
IRF3-208ENST00000594387 J3KT08 172 aa9.05□□□□□ -0.96
IRF3-208ENST00000594387 PDE6GP18545 87 aa9.05□□□□□ -0.96
IRF3-208ENST00000594387 A0A1B0GW54 56 aa9.03□□□□□ -0.96
IRF3-208ENST00000594387 C8orf87E5RJ46 101 aa9.03□□□□□ -0.96
IRF3-208ENST00000594387 NDUFB1O75438 58 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms