RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 ETDCA0A1B0GVM5 59 aa8.25□□□□□ -1.09
VRK3-205ENST00000593919 UQCRQO14949 82 aa8.25□□□□□ -1.09
VRK3-205ENST00000593919 REG3GQ6UW15 175 aa8.25□□□□□ -1.09
VRK3-205ENST00000593919 DEFB105AQ8NG35 78 aa8.25□□□□□ -1.09
VRK3-205ENST00000593919 A0A087WVE0 104 aa8.24□□□□□ -1.09
VRK3-205ENST00000593919 TRBV7-4A0A0J9YYF1 115 aa8.24□□□□□ -1.09
VRK3-205ENST00000593919 PDE6GP18545 87 aa8.24□□□□□ -1.09
VRK3-205ENST00000593919 Q6ZRX8 168 aa8.24□□□□□ -1.09
VRK3-205ENST00000593919 A0A1B0GVY2 172 aa8.23□□□□□ -1.09
VRK3-205ENST00000593919 Q6ZSA8 131 aa8.23□□□□□ -1.09
VRK3-205ENST00000593919 HIST1H4AP62805 103 aaKnown RBP8.22□□□□□ -1.09
VRK3-205ENST00000593919 Q9BRP9 147 aa8.22□□□□□ -1.09
VRK3-205ENST00000593919 DHRS4-AS1Q9P1J3 65 aa8.22□□□□□ -1.09
VRK3-205ENST00000593919 LRP1BQ9NZR2 4599 aa8.21□□□□□ -1.09
VRK3-205ENST00000593919 ATP5EP2Q5VTU8 51 aa8.21□□□□□ -1.09
VRK3-205ENST00000593919 COX7CP15954 63 aa8.21□□□□□ -1.1
VRK3-205ENST00000593919 Q8N377 158 aa8.21□□□□□ -1.1
VRK3-205ENST00000593919 CIRBP-AS1Q8TBR5 109 aa8.21□□□□□ -1.1
VRK3-205ENST00000593919 SRRM2Q9UQ35 2752 aaKnown RBP8.2□□□□□ -1.1
VRK3-205ENST00000593919 Q6ZVQ6 151 aa8.19□□□□□ -1.1
VRK3-205ENST00000593919 SCXQ7RTU7 201 aa8.19□□□□□ -1.1
VRK3-205ENST00000593919 J3KT08 172 aa8.19□□□□□ -1.1
VRK3-205ENST00000593919 LINC01547P58512 204 aaPredicted RBP8.19□□□□□ -1.1
VRK3-205ENST00000593919 HAMPP81172 84 aa8.19□□□□□ -1.1
VRK3-205ENST00000593919 FAM19A1Q7Z5A9 133 aa8.19□□□□□ -1.1
VRK3-205ENST00000593919 CRYGAP11844 174 aa8.18□□□□□ -1.1
VRK3-205ENST00000593919 ST20-AS1Q8NBB2 130 aa8.18□□□□□ -1.1
VRK3-205ENST00000593919 PRLHP81277 87 aa8.17□□□□□ -1.1
VRK3-205ENST00000593919 DYNC1H1Q14204 4646 aaKnown RBP8.17□□□□□ -1.1
VRK3-205ENST00000593919 ATOX1O00244 68 aa8.17□□□□□ -1.1
VRK3-205ENST00000593919 ERC2-IT1O76042 136 aa8.17□□□□□ -1.1
VRK3-205ENST00000593919 FAM229AH3BQW9 127 aa8.15□□□□□ -1.1
VRK3-205ENST00000593919 CYSTM1Q9H1C7 97 aa8.15□□□□□ -1.1
VRK3-205ENST00000593919 PSORS1C2Q9UIG4 136 aa8.15□□□□□ -1.1
VRK3-205ENST00000593919 BCE1O60756 84 aa8.15□□□□□ -1.11
VRK3-205ENST00000593919 RPS28P62857 69 aaKnown RBP8.14□□□□□ -1.11
VRK3-205ENST00000593919 VPS13BQ7Z7G8 4022 aa8.14□□□□□ -1.11
VRK3-205ENST00000593919 H0Y9J4 135 aa8.13□□□□□ -1.11
VRK3-205ENST00000593919 UBE2AP49459 152 aa8.13□□□□□ -1.11
VRK3-205ENST00000593919 IGLV5-48A0A075B6I7 105 aa8.12□□□□□ -1.11
VRK3-205ENST00000593919 HIGD2AQ9BW72 106 aa8.12□□□□□ -1.11
VRK3-205ENST00000593919 KRTAP13-1Q8IUC0 172 aa8.11□□□□□ -1.11
VRK3-205ENST00000593919 C1orf137Q5JT78 98 aa8.11□□□□□ -1.11
VRK3-205ENST00000593919 CXCL6P80162 114 aa8.1□□□□□ -1.11
VRK3-205ENST00000593919 APOBP04114 4563 aaKnown RBP8.09□□□□□ -1.12
VRK3-205ENST00000593919 OXTP01178 125 aa8.08□□□□□ -1.12
VRK3-205ENST00000593919 TMEM258P61165 79 aa8.08□□□□□ -1.12
VRK3-205ENST00000593919 SERP2Q8N6R1 65 aa8.08□□□□□ -1.12
VRK3-205ENST00000593919 NREPQ16612 68 aa8.07□□□□□ -1.12
VRK3-205ENST00000593919 A0A1W2PNM2 257 aa8.06□□□□□ -1.12
VRK3-205ENST00000593919 PRR26Q8N8Z3 221 aa8.06□□□□□ -1.12
VRK3-205ENST00000593919 SMIM29Q86T20 159 aa8.05□□□□□ -1.12
VRK3-205ENST00000593919 ZNF861PO60384 105 aa8.04□□□□□ -1.12
VRK3-205ENST00000593919 IGLV7-43P04211 117 aa8.04□□□□□ -1.12
VRK3-205ENST00000593919 F8WEM9 126 aa8.04□□□□□ -1.12
VRK3-205ENST00000593919 Q8NBF4 154 aa8.03□□□□□ -1.12
VRK3-205ENST00000593919 Q8N9L7 120 aa8.02□□□□□ -1.12
VRK3-205ENST00000593919 Q75L30 129 aa8.02□□□□□ -1.13
VRK3-205ENST00000593919 A0A0G2JQZ4 141 aa8.01□□□□□ -1.13
VRK3-205ENST00000593919 BPY2O14599 106 aa8.01□□□□□ -1.13
VRK3-205ENST00000593919 Q5XG85 94 aa8□□□□□ -1.13
VRK3-205ENST00000593919 SMR3BP02814 79 aaPredicted RBP7.99□□□□□ -1.13
VRK3-205ENST00000593919 A0A1B0GW54 56 aa7.99□□□□□ -1.13
VRK3-205ENST00000593919 IGKV4-1P06312 121 aa7.99□□□□□ -1.13
VRK3-205ENST00000593919 SPRR4Q96PI1 79 aa7.99□□□□□ -1.13
VRK3-205ENST00000593919 KRTAP3-3Q9BYR6 98 aa7.99□□□□□ -1.13
VRK3-205ENST00000593919 KRTAP3-2Q9BYR7 98 aa7.99□□□□□ -1.13
VRK3-205ENST00000593919 C4orf26Q17RF5 130 aa7.98□□□□□ -1.13
VRK3-205ENST00000593919 IGFL1Q6UW32 110 aa7.98□□□□□ -1.13
VRK3-205ENST00000593919 SPRR1BP22528 89 aa7.97□□□□□ -1.13
VRK3-205ENST00000593919 FAT1Q14517 4588 aa7.96□□□□□ -1.13
VRK3-205ENST00000593919 TRAV7A0A075B6U4 112 aa7.95□□□□□ -1.14
VRK3-205ENST00000593919 RPL37AP61513 92 aaKnown RBP7.95□□□□□ -1.14
VRK3-205ENST00000593919 ZNF706Q9Y5V0 76 aaPredicted RBP7.95□□□□□ -1.14
VRK3-205ENST00000593919 EPPK1P58107 5090 aaKnown RBP7.95□□□□□ -1.14
VRK3-205ENST00000593919 IGLV8-61A0A075B6I0 122 aa7.94□□□□□ -1.14
VRK3-205ENST00000593919 LINC00483Q53H64 154 aa7.94□□□□□ -1.14
VRK3-205ENST00000593919 HRCT1Q6UXD1 115 aa7.94□□□□□ -1.14
VRK3-205ENST00000593919 HSPG2P98160 4391 aa7.94□□□□□ -1.14
VRK3-205ENST00000593919 CD164Q04900 197 aa7.93□□□□□ -1.14
VRK3-205ENST00000593919 C20orf197Q8N268 126 aa7.93□□□□□ -1.14
VRK3-205ENST00000593919 ANAPC11Q9NYG5 84 aa7.92□□□□□ -1.14
VRK3-205ENST00000593919 CDK2AP2O75956 126 aa7.91□□□□□ -1.14
VRK3-205ENST00000593919 RYR1P21817 5038 aa7.9□□□□□ -1.14
VRK3-205ENST00000593919 A0A087WSZ3 146 aa7.9□□□□□ -1.15
VRK3-205ENST00000593919 SEC61BP60468 96 aaKnown RBP7.9□□□□□ -1.15
VRK3-205ENST00000593919 KRTAP10-4P60372 401 aaPredicted RBP7.89□□□□□ -1.15
VRK3-205ENST00000593919 IGLV9-49A0A0B4J1Y8 123 aa7.88□□□□□ -1.15
VRK3-205ENST00000593919 DSCR10P59022 87 aa7.88□□□□□ -1.15
VRK3-205ENST00000593919 DEFB116Q30KQ4 102 aa7.88□□□□□ -1.15
VRK3-205ENST00000593919 FAM236DA0A1B0GTK5 79 aa7.88□□□□□ -1.15
VRK3-205ENST00000593919 FAM236CP0DP71 79 aa7.88□□□□□ -1.15
VRK3-205ENST00000593919 K7EQZ3 153 aa7.87□□□□□ -1.15
VRK3-205ENST00000593919 SPINK6Q6UWN8 80 aa7.86□□□□□ -1.15
VRK3-205ENST00000593919 KIAA1109Q2LD37 5005 aa7.85□□□□□ -1.15
VRK3-205ENST00000593919 H7BZZ5 65 aa7.85□□□□□ -1.15
VRK3-205ENST00000593919 PRO0628Q9UI54 55 aa7.85□□□□□ -1.15
VRK3-205ENST00000593919 SNURFQ9Y675 71 aa7.85□□□□□ -1.15
VRK3-205ENST00000593919 KRTAP1-4P0C5Y4 121 aa7.84□□□□□ -1.15
VRK3-205ENST00000593919 MOBPQ13875 183 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms