RNA–Protein interactions for RNA: ENST00000593104.5

PRKCSH-220, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-220ENST00000593104 USH2AO75445 5202 aa5.74□□□□□ -1.49
PRKCSH-220ENST00000593104 ATP11AUNQ6ZP68 121 aa5.74□□□□□ -1.49
PRKCSH-220ENST00000593104 SMIM11BQ8TCY0 68 aa5.74□□□□□ -1.49
PRKCSH-220ENST00000593104 HIST1H2BLQ99880 126 aa5.74□□□□□ -1.49
PRKCSH-220ENST00000593104 ANKRD39Q53RE8 183 aa5.73□□□□□ -1.49
PRKCSH-220ENST00000593104 SCGB1D4Q6XE38 83 aa5.73□□□□□ -1.49
PRKCSH-220ENST00000593104 Q75L30 129 aa5.73□□□□□ -1.49
PRKCSH-220ENST00000593104 MUSTN1Q8IVN3 82 aa5.73□□□□□ -1.49
PRKCSH-220ENST00000593104 TRBV7-7A0A0K0K1E9 115 aa5.72□□□□□ -1.49
PRKCSH-220ENST00000593104 IGFL1Q6UW32 110 aa5.72□□□□□ -1.49
PRKCSH-220ENST00000593104 SCGB1D1O95968 90 aa5.71□□□□□ -1.5
PRKCSH-220ENST00000593104 C3orf79P0CE67 100 aa5.71□□□□□ -1.5
PRKCSH-220ENST00000593104 ATOH7Q8N100 152 aa5.71□□□□□ -1.5
PRKCSH-220ENST00000593104 C20orf202A1L168 122 aa5.7□□□□□ -1.5
PRKCSH-220ENST00000593104 F8WEM9 126 aa5.7□□□□□ -1.5
PRKCSH-220ENST00000593104 TSTD3H0UI37 97 aa5.7□□□□□ -1.5
PRKCSH-220ENST00000593104 LCE2BO14633 110 aa5.7□□□□□ -1.5
PRKCSH-220ENST00000593104 MT2AP02795 61 aa5.7□□□□□ -1.5
PRKCSH-220ENST00000593104 PET117Q6UWS5 81 aa5.7□□□□□ -1.5
PRKCSH-220ENST00000593104 KRTAP19-1Q8IUB9 90 aa5.7□□□□□ -1.5
PRKCSH-220ENST00000593104 Q96NJ1 140 aa5.7□□□□□ -1.5
PRKCSH-220ENST00000593104 CFC1P0CG37 223 aa5.69□□□□□ -1.5
PRKCSH-220ENST00000593104 Q6ZQY7 126 aa5.69□□□□□ -1.5
PRKCSH-220ENST00000593104 MT1FP04733 61 aa5.68□□□□□ -1.5
PRKCSH-220ENST00000593104 KRTDAPP60985 99 aa5.68□□□□□ -1.5
PRKCSH-220ENST00000593104 PYY3Q5JQD4 70 aa5.68□□□□□ -1.5
PRKCSH-220ENST00000593104 CLEC2BQ92478 149 aa5.68□□□□□ -1.5
PRKCSH-220ENST00000593104 A4D1N5 150 aa5.67□□□□□ -1.5
PRKCSH-220ENST00000593104 H3BUT2 72 aa5.67□□□□□ -1.5
PRKCSH-220ENST00000593104 IFITM1P13164 125 aa5.67□□□□□ -1.5
PRKCSH-220ENST00000593104 LINC00575Q6W349 94 aa5.67□□□□□ -1.5
PRKCSH-220ENST00000593104 NHP2Q9NX24 153 aaKnown RBP5.67□□□□□ -1.5
PRKCSH-220ENST00000593104 FCGBPQ9Y6R7 5405 aaPredicted RBP5.66□□□□□ -1.5
PRKCSH-220ENST00000593104 TRAV13-2A0A0B4J235 113 aa5.65□□□□□ -1.5
PRKCSH-220ENST00000593104 PCP4L1A6NKN8 68 aa5.65□□□□□ -1.5
PRKCSH-220ENST00000593104 HSBP1L1C9JCN9 74 aa5.65□□□□□ -1.5
PRKCSH-220ENST00000593104 OCIAD2Q56VL3 154 aa5.65□□□□□ -1.5
PRKCSH-220ENST00000593104 hADV29S1A0JD25 119 aa5.64□□□□□ -1.51
PRKCSH-220ENST00000593104 KRTAP16-1A8MUX0 517 aa5.64□□□□□ -1.51
PRKCSH-220ENST00000593104 Q6JHZ5 121 aa5.64□□□□□ -1.51
PRKCSH-220ENST00000593104 VAMP8Q9BV40 100 aa5.64□□□□□ -1.51
PRKCSH-220ENST00000593104 LST1O00453 97 aa5.63□□□□□ -1.51
PRKCSH-220ENST00000593104 C20orf166-AS1Q96NR2 134 aa5.63□□□□□ -1.51
PRKCSH-220ENST00000593104 A8MUU9 505 aa5.62□□□□□ -1.51
PRKCSH-220ENST00000593104 DSCR10P59022 87 aa5.62□□□□□ -1.51
PRKCSH-220ENST00000593104 COPS9Q8WXC6 57 aa5.62□□□□□ -1.51
PRKCSH-220ENST00000593104 KRTAP9-3Q9BYQ3 159 aa5.62□□□□□ -1.51
PRKCSH-220ENST00000593104 TRBV20-1A0A075B6N2 111 aa5.61□□□□□ -1.51
PRKCSH-220ENST00000593104 Q6ZVH6 145 aa5.61□□□□□ -1.51
PRKCSH-220ENST00000593104 VAMP3Q15836 100 aa5.6□□□□□ -1.51
PRKCSH-220ENST00000593104 FAM236DA0A1B0GTK5 79 aa5.59□□□□□ -1.51
PRKCSH-220ENST00000593104 FAM236CP0DP71 79 aa5.59□□□□□ -1.51
PRKCSH-220ENST00000593104 KRTAP10-10P60014 251 aa5.59□□□□□ -1.51
PRKCSH-220ENST00000593104 UQCR10Q9UDW1 63 aa5.58□□□□□ -1.52
PRKCSH-220ENST00000593104 SPATA45Q537H7 98 aa5.57□□□□□ -1.52
PRKCSH-220ENST00000593104 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.57□□□□□ -1.52
PRKCSH-220ENST00000593104 SNHG12Q9BXW3 62 aa5.57□□□□□ -1.52
PRKCSH-220ENST00000593104 A0A087WSZ3 146 aa5.56□□□□□ -1.52
PRKCSH-220ENST00000593104 PAM16Q9Y3D7 125 aa5.56□□□□□ -1.52
PRKCSH-220ENST00000593104 HRES1P13985 223 aa5.55□□□□□ -1.52
PRKCSH-220ENST00000593104 NOTCH2NLQ7Z3S9 236 aa5.54□□□□□ -1.52
PRKCSH-220ENST00000593104 M0R143 59 aa5.53□□□□□ -1.52
PRKCSH-220ENST00000593104 MACF1Q9UPN3 7388 aaKnown RBP5.52□□□□□ -1.53
PRKCSH-220ENST00000593104 MPLKIPQ8TAP9 179 aa5.52□□□□□ -1.53
PRKCSH-220ENST00000593104 FAM218AQ96MZ4 157 aa5.52□□□□□ -1.53
PRKCSH-220ENST00000593104 SIGMAR1Q99720 223 aa5.52□□□□□ -1.53
PRKCSH-220ENST00000593104 SYNE2Q8WXH0 6885 aaKnown RBP5.52□□□□□ -1.53
PRKCSH-220ENST00000593104 SS18L2Q9UHA2 77 aa5.51□□□□□ -1.53
PRKCSH-220ENST00000593104 NDUFV3P56181 108 aaKnown RBP5.5□□□□□ -1.53
PRKCSH-220ENST00000593104 TEN1Q86WV5 123 aa5.5□□□□□ -1.53
PRKCSH-220ENST00000593104 PPDPFLQ8WWR9 84 aa5.5□□□□□ -1.53
PRKCSH-220ENST00000593104 DLEU1O43261 78 aa5.49□□□□□ -1.53
PRKCSH-220ENST00000593104 BVES-AS1Q5T3Y7 98 aa5.49□□□□□ -1.53
PRKCSH-220ENST00000593104 C14orf144Q96I85 54 aa5.49□□□□□ -1.53
PRKCSH-220ENST00000593104 A0A1B0GV72 72 aa5.48□□□□□ -1.53
PRKCSH-220ENST00000593104 A0A1W2PNM2 257 aa5.48□□□□□ -1.53
PRKCSH-220ENST00000593104 COX8AP10176 69 aa5.48□□□□□ -1.53
PRKCSH-220ENST00000593104 DEFB116Q30KQ4 102 aa5.48□□□□□ -1.53
PRKCSH-220ENST00000593104 RBM12B-AS1Q9P1G2 102 aa5.48□□□□□ -1.53
PRKCSH-220ENST00000593104 LINC00313P59037 77 aa5.47□□□□□ -1.53
PRKCSH-220ENST00000593104 KRTAP19-6Q3LI70 58 aa5.47□□□□□ -1.53
PRKCSH-220ENST00000593104 COL5A1-AS1Q5SY13 56 aa5.47□□□□□ -1.53
PRKCSH-220ENST00000593104 H3BMG7 143 aa5.46□□□□□ -1.54
PRKCSH-220ENST00000593104 IGKV4-1P06312 121 aa5.46□□□□□ -1.54
PRKCSH-220ENST00000593104 HIST1H4GQ99525 98 aa5.46□□□□□ -1.54
PRKCSH-220ENST00000593104 FABP2P12104 132 aa5.44□□□□□ -1.54
PRKCSH-220ENST00000593104 HIGD1BQ9P298 99 aa5.44□□□□□ -1.54
PRKCSH-220ENST00000593104 HSD52Q0P140 79 aa5.42□□□□□ -1.54
PRKCSH-220ENST00000593104 BATFQ16520 125 aa5.42□□□□□ -1.54
PRKCSH-220ENST00000593104 IGHV6-1A0A0B4J1U7 121 aa5.41□□□□□ -1.54
PRKCSH-220ENST00000593104 Q8N9P0 234 aaPredicted RBP5.4□□□□□ -1.54
PRKCSH-220ENST00000593104 RAB37Q96AX2 223 aa5.4□□□□□ -1.54
PRKCSH-220ENST00000593104 TMEM238LA0A1B0GVL6 79 aa5.39□□□□□ -1.55
PRKCSH-220ENST00000593104 A6NJY4 79 aa5.39□□□□□ -1.55
PRKCSH-220ENST00000593104 LINC00472Q9H8W2 130 aa5.38□□□□□ -1.55
PRKCSH-220ENST00000593104 H0YGX0 51 aa5.37□□□□□ -1.55
PRKCSH-220ENST00000593104 KRTAP6-3Q3LI67 103 aa5.37□□□□□ -1.55
PRKCSH-220ENST00000593104 ANKRD29Q8N6D5 301 aa5.36□□□□□ -1.55
PRKCSH-220ENST00000593104 LINC00846Q9NV44 126 aa5.36□□□□□ -1.55
PRKCSH-220ENST00000593104 A0A0B4J2C4 111 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 1014.1 ms