RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 PRO1933Q9H354 126 aa7.86□□□□□ -1.15
CLIP3-205ENST00000592017 FXYD2P54710 66 aa7.84□□□□□ -1.15
CLIP3-205ENST00000592017 LIMD2Q9BT23 127 aa7.84□□□□□ -1.15
CLIP3-205ENST00000592017 A0A0G2JQZ4 141 aa7.83□□□□□ -1.16
CLIP3-205ENST00000592017 F8WEM9 126 aa7.83□□□□□ -1.16
CLIP3-205ENST00000592017 LOC105371267A0A1B0GV96 52 aa7.82□□□□□ -1.16
CLIP3-205ENST00000592017 HSD52Q0P140 79 aa7.82□□□□□ -1.16
CLIP3-205ENST00000592017 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.81□□□□□ -1.16
CLIP3-205ENST00000592017 PRO1854Q9UHT4 67 aa7.81□□□□□ -1.16
CLIP3-205ENST00000592017 UQCR10Q9UDW1 63 aa7.8□□□□□ -1.16
CLIP3-205ENST00000592017 CD164Q04900 197 aa7.79□□□□□ -1.16
CLIP3-205ENST00000592017 KRTAP13-3Q3SY46 172 aa7.79□□□□□ -1.16
CLIP3-205ENST00000592017 H0YGX0 51 aa7.78□□□□□ -1.16
CLIP3-205ENST00000592017 K7ERJ3 54 aa7.78□□□□□ -1.16
CLIP3-205ENST00000592017 FAM218AQ96MZ4 157 aa7.78□□□□□ -1.16
CLIP3-205ENST00000592017 SNCGO76070 127 aa7.77□□□□□ -1.17
CLIP3-205ENST00000592017 A0A0U1RQV1 116 aa7.76□□□□□ -1.17
CLIP3-205ENST00000592017 SNHG12Q9BXW3 62 aa7.76□□□□□ -1.17
CLIP3-205ENST00000592017 TRIAP1O43715 76 aa7.75□□□□□ -1.17
CLIP3-205ENST00000592017 PPDPFLQ8WWR9 84 aa7.75□□□□□ -1.17
CLIP3-205ENST00000592017 PSMB2P49721 201 aa7.74□□□□□ -1.17
CLIP3-205ENST00000592017 OCIAD2Q56VL3 154 aa7.73□□□□□ -1.17
CLIP3-205ENST00000592017 Q6JHZ5 121 aa7.73□□□□□ -1.17
CLIP3-205ENST00000592017 IGFL1Q6UW32 110 aa7.73□□□□□ -1.17
CLIP3-205ENST00000592017 CLEC2BQ92478 149 aa7.73□□□□□ -1.17
CLIP3-205ENST00000592017 H3BUT2 72 aa7.72□□□□□ -1.17
CLIP3-205ENST00000592017 IGLV8-61A0A075B6I0 122 aa7.71□□□□□ -1.18
CLIP3-205ENST00000592017 LCE2AQ5TA79 106 aaPredicted RBP7.71□□□□□ -1.18
CLIP3-205ENST00000592017 Q5XG85 94 aa7.7□□□□□ -1.18
CLIP3-205ENST00000592017 A0A1B0GX51 115 aa7.69□□□□□ -1.18
CLIP3-205ENST00000592017 TCL1BO95988 128 aa7.69□□□□□ -1.18
CLIP3-205ENST00000592017 ASB16-AS1Q495Z4 193 aa7.69□□□□□ -1.18
CLIP3-205ENST00000592017 C9orf92A6NGG3 77 aa7.68□□□□□ -1.18
CLIP3-205ENST00000592017 DNAL4O96015 105 aa7.68□□□□□ -1.18
CLIP3-205ENST00000592017 COX6CP09669 75 aa7.68□□□□□ -1.18
CLIP3-205ENST00000592017 SMIM6P0DI80 62 aa7.68□□□□□ -1.18
CLIP3-205ENST00000592017 FABP2P12104 132 aa7.68□□□□□ -1.18
CLIP3-205ENST00000592017 C1orf195Q5TG92 126 aa7.68□□□□□ -1.18
CLIP3-205ENST00000592017 TRBV7-7A0A0K0K1E9 115 aa7.67□□□□□ -1.18
CLIP3-205ENST00000592017 NDUFV3P56181 108 aaKnown RBP7.67□□□□□ -1.18
CLIP3-205ENST00000592017 XP32Q5T750 250 aa7.67□□□□□ -1.18
CLIP3-205ENST00000592017 GHRHP01286 108 aa7.66□□□□□ -1.18
CLIP3-205ENST00000592017 KRTAP4-1Q9BYQ7 146 aa7.66□□□□□ -1.18
CLIP3-205ENST00000592017 SEC61BP60468 96 aaKnown RBP7.64□□□□□ -1.19
CLIP3-205ENST00000592017 ORMDL1Q9P0S3 153 aa7.64□□□□□ -1.19
CLIP3-205ENST00000592017 A0A1B0GV72 72 aa7.63□□□□□ -1.19
CLIP3-205ENST00000592017 H3BMG7 143 aa7.63□□□□□ -1.19
CLIP3-205ENST00000592017 SCGB1C2P0DMR2 95 aa7.63□□□□□ -1.19
CLIP3-205ENST00000592017 M0R143 59 aa7.62□□□□□ -1.19
CLIP3-205ENST00000592017 LST1O00453 97 aa7.58□□□□□ -1.2
CLIP3-205ENST00000592017 TEN1Q86WV5 123 aa7.58□□□□□ -1.2
CLIP3-205ENST00000592017 A0A087WSZ3 146 aa7.57□□□□□ -1.2
CLIP3-205ENST00000592017 TSTD3H0UI37 97 aa7.57□□□□□ -1.2
CLIP3-205ENST00000592017 H3BQ85 93 aa7.57□□□□□ -1.2
CLIP3-205ENST00000592017 TMEM256-PLSCR3K7ERE1 68 aa7.57□□□□□ -1.2
CLIP3-205ENST00000592017 Q6Q795 121 aa7.57□□□□□ -1.2
CLIP3-205ENST00000592017 NAA38Q9BRA0 125 aaKnown RBP7.57□□□□□ -1.2
CLIP3-205ENST00000592017 SS18L2Q9UHA2 77 aa7.57□□□□□ -1.2
CLIP3-205ENST00000592017 TRACP01848 142 aa7.56□□□□□ -1.2
CLIP3-205ENST00000592017 KRTAP9-2Q9BYQ4 174 aa7.56□□□□□ -1.2
CLIP3-205ENST00000592017 BATFQ16520 125 aa7.55□□□□□ -1.2
CLIP3-205ENST00000592017 ANKRD29Q8N6D5 301 aa7.55□□□□□ -1.2
CLIP3-205ENST00000592017 A0A1W2PNM2 257 aa7.54□□□□□ -1.2
CLIP3-205ENST00000592017 PCOTHQ58A44 107 aa7.54□□□□□ -1.2
CLIP3-205ENST00000592017 UBE2V1Q13404 147 aa7.52□□□□□ -1.21
CLIP3-205ENST00000592017 ATXN8Q156A1 80 aa7.5□□□□□ -1.21
CLIP3-205ENST00000592017 RPL37P61927 97 aaKnown RBP7.49□□□□□ -1.21
CLIP3-205ENST00000592017 OBSCN-AS1Q96MR7 158 aa7.49□□□□□ -1.21
CLIP3-205ENST00000592017 TRBV7-4A0A0J9YYF1 115 aa7.48□□□□□ -1.21
CLIP3-205ENST00000592017 CCKP06307 115 aa7.48□□□□□ -1.21
CLIP3-205ENST00000592017 BAALC-AS2P0C853 105 aa7.48□□□□□ -1.21
CLIP3-205ENST00000592017 LCE2CQ5TA81 110 aa7.48□□□□□ -1.21
CLIP3-205ENST00000592017 VPS25Q9BRG1 176 aa7.48□□□□□ -1.21
CLIP3-205ENST00000592017 SIGMAR1Q99720 223 aa7.47□□□□□ -1.21
CLIP3-205ENST00000592017 RBM3P98179 157 aaKnown RBP7.46□□□□□ -1.22
CLIP3-205ENST00000592017 LYRM7Q5U5X0 104 aa7.46□□□□□ -1.22
CLIP3-205ENST00000592017 Q96NJ1 140 aa7.46□□□□□ -1.22
CLIP3-205ENST00000592017 KRTAP19-2Q3LHN2 52 aa7.45□□□□□ -1.22
CLIP3-205ENST00000592017 DSCR8Q96T75 97 aa7.45□□□□□ -1.22
CLIP3-205ENST00000592017 IGKV4-1P06312 121 aa7.42□□□□□ -1.22
CLIP3-205ENST00000592017 C9JAW5 83 aa7.41□□□□□ -1.22
CLIP3-205ENST00000592017 DEFB116Q30KQ4 102 aa7.41□□□□□ -1.22
CLIP3-205ENST00000592017 DSCR10P59022 87 aa7.4□□□□□ -1.22
CLIP3-205ENST00000592017 TRBV20-1A0A075B6N2 111 aa7.39□□□□□ -1.23
CLIP3-205ENST00000592017 PCP4L1A6NKN8 68 aa7.39□□□□□ -1.23
CLIP3-205ENST00000592017 Q75L30 129 aa7.39□□□□□ -1.23
CLIP3-205ENST00000592017 C9orf118A6NHY6 69 aa7.38□□□□□ -1.23
CLIP3-205ENST00000592017 TAX1BP3O14907 124 aa7.38□□□□□ -1.23
CLIP3-205ENST00000592017 JMJD7-PLA2G4BH0Y9G9 81 aa7.37□□□□□ -1.23
CLIP3-205ENST00000592017 ATP11AUNQ6ZP68 121 aa7.37□□□□□ -1.23
CLIP3-205ENST00000592017 LINC00472Q9H8W2 130 aa7.36□□□□□ -1.23
CLIP3-205ENST00000592017 A0A1W2PPM0 123 aa7.35□□□□□ -1.23
CLIP3-205ENST00000592017 MT1HP80294 61 aa7.35□□□□□ -1.23
CLIP3-205ENST00000592017 C14orf132Q9NPU4 83 aa7.35□□□□□ -1.23
CLIP3-205ENST00000592017 Q6ZQT0 140 aa7.34□□□□□ -1.23
CLIP3-205ENST00000592017 MTURNQ8N3F0 131 aa7.34□□□□□ -1.23
CLIP3-205ENST00000592017 IGHV6-1A0A0B4J1U7 121 aa7.33□□□□□ -1.24
CLIP3-205ENST00000592017 LINC00313P59037 77 aa7.33□□□□□ -1.24
CLIP3-205ENST00000592017 C20orf166-AS1Q96NR2 134 aa7.33□□□□□ -1.24
CLIP3-205ENST00000592017 LOC110117498A0A087WWA1 95 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms