RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 SMIM11BQ8TCY0 68 aa6.91□□□□□ -1.3
PRKCSH-210ENST00000589990 H7C2G1 150 aa6.9□□□□□ -1.3
PRKCSH-210ENST00000589990 CFC1P0CG37 223 aa6.9□□□□□ -1.3
PRKCSH-210ENST00000589990 COX7BP24311 80 aa6.9□□□□□ -1.3
PRKCSH-210ENST00000589990 RPS29P62273 56 aaKnown RBP6.9□□□□□ -1.3
PRKCSH-210ENST00000589990 GAGE2AQ6NT46 116 aa6.9□□□□□ -1.3
PRKCSH-210ENST00000589990 Q9BRP9 147 aa6.9□□□□□ -1.3
PRKCSH-210ENST00000589990 C9orf92A6NGG3 77 aa6.89□□□□□ -1.31
PRKCSH-210ENST00000589990 FXYD2P54710 66 aa6.89□□□□□ -1.31
PRKCSH-210ENST00000589990 VAMP3Q15836 100 aa6.89□□□□□ -1.31
PRKCSH-210ENST00000589990 TRBV7-6A0A0J9YX20 115 aa6.88□□□□□ -1.31
PRKCSH-210ENST00000589990 ERC2-IT1O76042 136 aa6.88□□□□□ -1.31
PRKCSH-210ENST00000589990 ELOF1P60002 83 aaKnown RBP6.88□□□□□ -1.31
PRKCSH-210ENST00000589990 A0A0B4J2C4 111 aa6.87□□□□□ -1.31
PRKCSH-210ENST00000589990 A0A1B0GWB2 263 aa6.87□□□□□ -1.31
PRKCSH-210ENST00000589990 DHRS4-AS1Q9P1J3 65 aa6.87□□□□□ -1.31
PRKCSH-210ENST00000589990 PRO1854Q9UHT4 67 aa6.87□□□□□ -1.31
PRKCSH-210ENST00000589990 TSTD3H0UI37 97 aa6.86□□□□□ -1.31
PRKCSH-210ENST00000589990 Q1RN00 199 aa6.86□□□□□ -1.31
PRKCSH-210ENST00000589990 NHP2Q9NX24 153 aaKnown RBP6.86□□□□□ -1.31
PRKCSH-210ENST00000589990 SSBP3-AS1Q7Z2R9 100 aa6.85□□□□□ -1.31
PRKCSH-210ENST00000589990 BVES-AS1Q5T3Y7 98 aa6.84□□□□□ -1.31
PRKCSH-210ENST00000589990 ST20-AS1Q8NBB2 130 aa6.84□□□□□ -1.31
PRKCSH-210ENST00000589990 FCGBPQ9Y6R7 5405 aaPredicted RBP6.84□□□□□ -1.31
PRKCSH-210ENST00000589990 K7ERJ3 54 aa6.82□□□□□ -1.32
PRKCSH-210ENST00000589990 COX6B2Q6YFQ2 88 aa6.82□□□□□ -1.32
PRKCSH-210ENST00000589990 M0R143 59 aa6.81□□□□□ -1.32
PRKCSH-210ENST00000589990 DEFB105AQ8NG35 78 aa6.81□□□□□ -1.32
PRKCSH-210ENST00000589990 LINC00575Q6W349 94 aa6.8□□□□□ -1.32
PRKCSH-210ENST00000589990 hADV29S1A0JD25 119 aa6.79□□□□□ -1.32
PRKCSH-210ENST00000589990 PSMB2P49721 201 aa6.79□□□□□ -1.32
PRKCSH-210ENST00000589990 C9orf153Q5TBE3 101 aa6.79□□□□□ -1.32
PRKCSH-210ENST00000589990 H0YGX0 51 aa6.78□□□□□ -1.32
PRKCSH-210ENST00000589990 SNCGO76070 127 aa6.78□□□□□ -1.32
PRKCSH-210ENST00000589990 HRCT1Q6UXD1 115 aa6.77□□□□□ -1.33
PRKCSH-210ENST00000589990 TEX49A0A1B0GTD5 131 aa6.76□□□□□ -1.33
PRKCSH-210ENST00000589990 TRIAP1O43715 76 aa6.76□□□□□ -1.33
PRKCSH-210ENST00000589990 COX6CP09669 75 aa6.76□□□□□ -1.33
PRKCSH-210ENST00000589990 BATFQ16520 125 aa6.76□□□□□ -1.33
PRKCSH-210ENST00000589990 LAMTOR3Q9UHA4 124 aa6.76□□□□□ -1.33
PRKCSH-210ENST00000589990 SPRR1BP22528 89 aa6.75□□□□□ -1.33
PRKCSH-210ENST00000589990 Q6ZQY7 126 aa6.75□□□□□ -1.33
PRKCSH-210ENST00000589990 SCGB1C2P0DMR2 95 aa6.74□□□□□ -1.33
PRKCSH-210ENST00000589990 KRTAP9-8Q9BYQ0 159 aa6.74□□□□□ -1.33
PRKCSH-210ENST00000589990 IGLV5-48A0A075B6I7 105 aa6.73□□□□□ -1.33
PRKCSH-210ENST00000589990 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.73□□□□□ -1.33
PRKCSH-210ENST00000589990 FAM218AQ96MZ4 157 aa6.73□□□□□ -1.33
PRKCSH-210ENST00000589990 CLEC2BQ92478 149 aa6.72□□□□□ -1.33
PRKCSH-210ENST00000589990 RPL37P61927 97 aaKnown RBP6.71□□□□□ -1.34
PRKCSH-210ENST00000589990 KRTAP19-1Q8IUB9 90 aa6.71□□□□□ -1.34
PRKCSH-210ENST00000589990 SYNE2Q8WXH0 6885 aaKnown RBP6.7□□□□□ -1.34
PRKCSH-210ENST00000589990 A0A1B0GX51 115 aa6.7□□□□□ -1.34
PRKCSH-210ENST00000589990 SMIM29Q86T20 159 aa6.7□□□□□ -1.34
PRKCSH-210ENST00000589990 NAA38Q9BRA0 125 aaKnown RBP6.69□□□□□ -1.34
PRKCSH-210ENST00000589990 MACF1Q9UPN3 7388 aaKnown RBP6.69□□□□□ -1.34
PRKCSH-210ENST00000589990 DNAL4O96015 105 aa6.68□□□□□ -1.34
PRKCSH-210ENST00000589990 OCIAD2Q56VL3 154 aa6.68□□□□□ -1.34
PRKCSH-210ENST00000589990 LIMD2Q9BT23 127 aa6.68□□□□□ -1.34
PRKCSH-210ENST00000589990 SNHG12Q9BXW3 62 aa6.68□□□□□ -1.34
PRKCSH-210ENST00000589990 PCP4L1A6NKN8 68 aa6.67□□□□□ -1.34
PRKCSH-210ENST00000589990 F8WEM9 126 aa6.67□□□□□ -1.34
PRKCSH-210ENST00000589990 GHRHP01286 108 aa6.67□□□□□ -1.34
PRKCSH-210ENST00000589990 Q6Q795 121 aa6.67□□□□□ -1.34
PRKCSH-210ENST00000589990 PPDPFLQ8WWR9 84 aa6.66□□□□□ -1.34
PRKCSH-210ENST00000589990 LCE2BO14633 110 aa6.65□□□□□ -1.34
PRKCSH-210ENST00000589990 FABP2P12104 132 aa6.65□□□□□ -1.34
PRKCSH-210ENST00000589990 H3BUT2 72 aa6.64□□□□□ -1.35
PRKCSH-210ENST00000589990 ORMDL1Q9P0S3 153 aa6.64□□□□□ -1.35
PRKCSH-210ENST00000589990 LST1O00453 97 aa6.63□□□□□ -1.35
PRKCSH-210ENST00000589990 TRACP01848 142 aa6.63□□□□□ -1.35
PRKCSH-210ENST00000589990 C1orf195Q5TG92 126 aa6.63□□□□□ -1.35
PRKCSH-210ENST00000589990 A0A0G2JQZ4 141 aa6.62□□□□□ -1.35
PRKCSH-210ENST00000589990 C9orf118A6NHY6 69 aa6.62□□□□□ -1.35
PRKCSH-210ENST00000589990 TAX1BP3O14907 124 aa6.62□□□□□ -1.35
PRKCSH-210ENST00000589990 NDUFV3P56181 108 aaKnown RBP6.62□□□□□ -1.35
PRKCSH-210ENST00000589990 LYRM7Q5U5X0 104 aa6.62□□□□□ -1.35
PRKCSH-210ENST00000589990 H3BQ85 93 aa6.61□□□□□ -1.35
PRKCSH-210ENST00000589990 TCL1BO95988 128 aa6.61□□□□□ -1.35
PRKCSH-210ENST00000589990 ATXN8Q156A1 80 aa6.61□□□□□ -1.35
PRKCSH-210ENST00000589990 TMEM256-PLSCR3K7ERE1 68 aa6.6□□□□□ -1.35
PRKCSH-210ENST00000589990 Q6JHZ5 121 aa6.6□□□□□ -1.35
PRKCSH-210ENST00000589990 H3BMG7 143 aa6.59□□□□□ -1.35
PRKCSH-210ENST00000589990 MT2AP02795 61 aa6.59□□□□□ -1.35
PRKCSH-210ENST00000589990 CD164Q04900 197 aa6.59□□□□□ -1.35
PRKCSH-210ENST00000589990 COL5A1-AS1Q5SY13 56 aa6.59□□□□□ -1.35
PRKCSH-210ENST00000589990 BAALC-AS2P0C853 105 aa6.58□□□□□ -1.36
PRKCSH-210ENST00000589990 IGFL1Q6UW32 110 aa6.58□□□□□ -1.36
PRKCSH-210ENST00000589990 TRBV20-1A0A075B6N2 111 aa6.57□□□□□ -1.36
PRKCSH-210ENST00000589990 A0A1B0GV72 72 aa6.57□□□□□ -1.36
PRKCSH-210ENST00000589990 A0A1W2PPM0 123 aa6.57□□□□□ -1.36
PRKCSH-210ENST00000589990 MT1FP04733 61 aa6.56□□□□□ -1.36
PRKCSH-210ENST00000589990 UBE2V1Q13404 147 aa6.55□□□□□ -1.36
PRKCSH-210ENST00000589990 Q5XG85 94 aa6.54□□□□□ -1.36
PRKCSH-210ENST00000589990 ANKRD29Q8N6D5 301 aa6.54□□□□□ -1.36
PRKCSH-210ENST00000589990 C9JAW5 83 aa6.53□□□□□ -1.36
PRKCSH-210ENST00000589990 KRTAP9-3Q9BYQ3 159 aa6.53□□□□□ -1.36
PRKCSH-210ENST00000589990 TRBV7-7A0A0K0K1E9 115 aa6.51□□□□□ -1.37
PRKCSH-210ENST00000589990 SPCS1Q9Y6A9 102 aa6.51□□□□□ -1.37
PRKCSH-210ENST00000589990 RBM3P98179 157 aaKnown RBP6.5□□□□□ -1.37
PRKCSH-210ENST00000589990 TEN1Q86WV5 123 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms