RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 HCG22E2RYF7 251 aa9.32□□□□□ -0.92
RETREG3-208ENST00000589797 K7EQZ3 153 aa9.32□□□□□ -0.92
RETREG3-208ENST00000589797 A0A087WTM6 91 aa9.31□□□□□ -0.92
RETREG3-208ENST00000589797 IGFL1Q6UW32 110 aa9.3□□□□□ -0.92
RETREG3-208ENST00000589797 KRTAP26-1Q6PEX3 210 aa9.3□□□□□ -0.92
RETREG3-208ENST00000589797 A0A1W2PNM2 257 aa9.29□□□□□ -0.92
RETREG3-208ENST00000589797 TLX1NBP0CAT3 122 aa9.29□□□□□ -0.92
RETREG3-208ENST00000589797 BCE1O60756 84 aa9.28□□□□□ -0.92
RETREG3-208ENST00000589797 CHKB-CPT1BH3BT56 60 aa9.27□□□□□ -0.93
RETREG3-208ENST00000589797 CRYGAP11844 174 aa9.27□□□□□ -0.93
RETREG3-208ENST00000589797 C4orf26Q17RF5 130 aa9.26□□□□□ -0.93
RETREG3-208ENST00000589797 SPACA4Q8TDM5 124 aa9.25□□□□□ -0.93
RETREG3-208ENST00000589797 OBSCN-AS1Q96MR7 158 aa9.25□□□□□ -0.93
RETREG3-208ENST00000589797 NDUFC1O43677 76 aa9.24□□□□□ -0.93
RETREG3-208ENST00000589797 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.24□□□□□ -0.93
RETREG3-208ENST00000589797 H0Y9P7 68 aa9.24□□□□□ -0.93
RETREG3-208ENST00000589797 WWC2-AS2Q96NR7 200 aa9.23□□□□□ -0.93
RETREG3-208ENST00000589797 PSORS1C2Q9UIG4 136 aa9.22□□□□□ -0.93
RETREG3-208ENST00000589797 TNP2Q05952 138 aa9.21□□□□□ -0.93
RETREG3-208ENST00000589797 LINC01600Q96MT4 127 aa9.21□□□□□ -0.94
RETREG3-208ENST00000589797 SMR3BP02814 79 aaPredicted RBP9.2□□□□□ -0.94
RETREG3-208ENST00000589797 CNBPP62633 177 aaKnown RBP9.2□□□□□ -0.94
RETREG3-208ENST00000589797 DMBT1Q9UGM3 2413 aaPredicted RBP9.2□□□□□ -0.94
RETREG3-208ENST00000589797 PLA2G2DQ9UNK4 145 aa9.19□□□□□ -0.94
RETREG3-208ENST00000589797 C1orf64Q8NEQ6 169 aa9.17□□□□□ -0.94
RETREG3-208ENST00000589797 hDV103S1A0JD37 113 aa9.17□□□□□ -0.94
RETREG3-208ENST00000589797 SPTSSBQ8NFR3 76 aa9.17□□□□□ -0.94
RETREG3-208ENST00000589797 PSPHP1O15172 72 aa9.15□□□□□ -0.94
RETREG3-208ENST00000589797 IGLV5-48A0A075B6I7 105 aa9.14□□□□□ -0.95
RETREG3-208ENST00000589797 SERP1Q9Y6X1 66 aa9.14□□□□□ -0.95
RETREG3-208ENST00000589797 PANO1I0J062 215 aa9.13□□□□□ -0.95
RETREG3-208ENST00000589797 ZNF861PO60384 105 aa9.12□□□□□ -0.95
RETREG3-208ENST00000589797 SMIM26A0A096LP01 95 aa9.12□□□□□ -0.95
RETREG3-208ENST00000589797 CYSTM1Q9H1C7 97 aa9.11□□□□□ -0.95
RETREG3-208ENST00000589797 SRRM2Q9UQ35 2752 aaKnown RBP9.1□□□□□ -0.95
RETREG3-208ENST00000589797 PLA2G1BP04054 148 aaKnown RBP9.09□□□□□ -0.95
RETREG3-208ENST00000589797 IGLV5-37A0A075B6J1 123 aa9.09□□□□□ -0.95
RETREG3-208ENST00000589797 IGKV2D-30A0A075B6S6 120 aa9.09□□□□□ -0.95
RETREG3-208ENST00000589797 IGKV2-30P06310 120 aa9.09□□□□□ -0.95
RETREG3-208ENST00000589797 A0A1B0GW54 56 aa9.06□□□□□ -0.96
RETREG3-208ENST00000589797 SPINK1P00995 79 aa9.06□□□□□ -0.96
RETREG3-208ENST00000589797 A8MWP4 228 aa9.06□□□□□ -0.96
RETREG3-208ENST00000589797 FLG2Q5D862 2391 aaPredicted RBP9.06□□□□□ -0.96
RETREG3-208ENST00000589797 ATP5EP56381 51 aaPredicted RBP9.06□□□□□ -0.96
RETREG3-208ENST00000589797 SPRR4Q96PI1 79 aa9.06□□□□□ -0.96
RETREG3-208ENST00000589797 SPRR1AP35321 89 aa9.05□□□□□ -0.96
RETREG3-208ENST00000589797 ANK3Q12955 4377 aaKnown RBP9.05□□□□□ -0.96
RETREG3-208ENST00000589797 C1orf195Q5TG92 126 aa9.05□□□□□ -0.96
RETREG3-208ENST00000589797 TYMSOSQ8TAI1 123 aa9.05□□□□□ -0.96
RETREG3-208ENST00000589797 PRR15Q8IV56 129 aa9.04□□□□□ -0.96
RETREG3-208ENST00000589797 DSCR10P59022 87 aa9.04□□□□□ -0.96
RETREG3-208ENST00000589797 V9GYY9 64 aa9.04□□□□□ -0.96
RETREG3-208ENST00000589797 H7BZZ5 65 aa9.04□□□□□ -0.96
RETREG3-208ENST00000589797 TRAV22A0A0B4J277 110 aa9.03□□□□□ -0.96
RETREG3-208ENST00000589797 IGLV7-43P04211 117 aa9.02□□□□□ -0.97
RETREG3-208ENST00000589797 KRTAP11-1Q8IUC1 163 aa9.01□□□□□ -0.97
RETREG3-208ENST00000589797 KRTAP7-1Q8IUC3 87 aa9.01□□□□□ -0.97
RETREG3-208ENST00000589797 A6NED7 52 aa8.99□□□□□ -0.97
RETREG3-208ENST00000589797 KLKP1Q107X0 134 aa8.99□□□□□ -0.97
RETREG3-208ENST00000589797 PRR15LQ9BU68 103 aa8.99□□□□□ -0.97
RETREG3-208ENST00000589797 LINC00313P59037 77 aa8.97□□□□□ -0.97
RETREG3-208ENST00000589797 C8orf17Q9NRJ1 99 aa8.95□□□□□ -0.98
RETREG3-208ENST00000589797 KRTAP4-16G5E9R7 235 aaPredicted RBP8.95□□□□□ -0.98
RETREG3-208ENST00000589797 KRTAP10-2P60368 255 aa8.95□□□□□ -0.98
RETREG3-208ENST00000589797 OCR1Q9BZK8 76 aa8.93□□□□□ -0.98
RETREG3-208ENST00000589797 SPAG11AQ6PDA7 123 aa8.93□□□□□ -0.98
RETREG3-208ENST00000589797 LINC00336Q6ZUF6 198 aa8.93□□□□□ -0.98
RETREG3-208ENST00000589797 MRPL34Q9BQ48 92 aaKnown RBP8.93□□□□□ -0.98
RETREG3-208ENST00000589797 LIMD2Q9BT23 127 aa8.93□□□□□ -0.98
RETREG3-208ENST00000589797 RPS28P62857 69 aaKnown RBP8.92□□□□□ -0.98
RETREG3-208ENST00000589797 Q96NJ1 140 aa8.92□□□□□ -0.98
RETREG3-208ENST00000589797 PRO0628Q9UI54 55 aa8.91□□□□□ -0.98
RETREG3-208ENST00000589797 A0A1B0GVX0 72 aa8.9□□□□□ -0.98
RETREG3-208ENST00000589797 PMAIP1Q13794 54 aa8.9□□□□□ -0.99
RETREG3-208ENST00000589797 TP53AIP1Q9HCN2 124 aa8.9□□□□□ -0.99
RETREG3-208ENST00000589797 C9orf92A6NGG3 77 aa8.88□□□□□ -0.99
RETREG3-208ENST00000589797 SSBP3-AS1Q7Z2R9 100 aa8.87□□□□□ -0.99
RETREG3-208ENST00000589797 SEC61GP60059 68 aa8.86□□□□□ -0.99
RETREG3-208ENST00000589797 FBN3Q75N90 2809 aa8.85□□□□□ -0.99
RETREG3-208ENST00000589797 PLAC8Q9NZF1 115 aa8.84□□□□□ -0.99
RETREG3-208ENST00000589797 KRTAP10-1P60331 282 aa8.83□□□□□ -1
RETREG3-208ENST00000589797 CSMD3Q7Z407 3707 aa8.83□□□□□ -1
RETREG3-208ENST00000589797 PRR26Q8N8Z3 221 aa8.83□□□□□ -1
RETREG3-208ENST00000589797 FAM229AH3BQW9 127 aa8.82□□□□□ -1
RETREG3-208ENST00000589797 Q6ZRN7 208 aaPredicted RBP8.82□□□□□ -1
RETREG3-208ENST00000589797 A8MUN3 132 aa8.81□□□□□ -1
RETREG3-208ENST00000589797 IGLV8-61A0A075B6I0 122 aa8.81□□□□□ -1
RETREG3-208ENST00000589797 C7orf65Q6ZTY9 151 aa8.8□□□□□ -1
RETREG3-208ENST00000589797 LINC00304Q8N9R0 145 aa8.79□□□□□ -1
RETREG3-208ENST00000589797 Q6ZR54 194 aa8.79□□□□□ -1
RETREG3-208ENST00000589797 LINC00472Q9H8W2 130 aa8.78□□□□□ -1
RETREG3-208ENST00000589797 COA5Q86WW8 74 aa8.77□□□□□ -1.01
RETREG3-208ENST00000589797 COL7A1Q02388 2944 aa8.76□□□□□ -1.01
RETREG3-208ENST00000589797 H3BPC8 53 aa8.75□□□□□ -1.01
RETREG3-208ENST00000589797 SPRR1BP22528 89 aa8.74□□□□□ -1.01
RETREG3-208ENST00000589797 MMP24-AS1A0A0U1RRL7 71 aa8.73□□□□□ -1.01
RETREG3-208ENST00000589797 OXTP01178 125 aa8.72□□□□□ -1.01
RETREG3-208ENST00000589797 ACYP2P14621 99 aa8.72□□□□□ -1.01
RETREG3-208ENST00000589797 LOC101927531A0A1B0GV80 90 aa8.71□□□□□ -1.02
RETREG3-208ENST00000589797 FAM229BQ4G0N7 80 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms