RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 HCG22E2RYF7 251 aa9.32□□□□□ -0.92
RETREG3-208ENST00000589797 K7EQZ3 153 aa9.32□□□□□ -0.92
RETREG3-208ENST00000589797 A0A087WTM6 91 aa9.31□□□□□ -0.92
RETREG3-208ENST00000589797 IGFL1Q6UW32 110 aa9.3□□□□□ -0.92
RETREG3-208ENST00000589797 KRTAP26-1Q6PEX3 210 aa9.3□□□□□ -0.92
RETREG3-208ENST00000589797 A0A1W2PNM2 257 aa9.29□□□□□ -0.92
RETREG3-208ENST00000589797 TLX1NBP0CAT3 122 aa9.29□□□□□ -0.92
RETREG3-208ENST00000589797 BCE1O60756 84 aa9.28□□□□□ -0.92
RETREG3-208ENST00000589797 CHKB-CPT1BH3BT56 60 aa9.27□□□□□ -0.93
RETREG3-208ENST00000589797 CRYGAP11844 174 aa9.27□□□□□ -0.93
RETREG3-208ENST00000589797 C4orf26Q17RF5 130 aa9.26□□□□□ -0.93
RETREG3-208ENST00000589797 SPACA4Q8TDM5 124 aa9.25□□□□□ -0.93
RETREG3-208ENST00000589797 OBSCN-AS1Q96MR7 158 aa9.25□□□□□ -0.93
RETREG3-208ENST00000589797 NDUFC1O43677 76 aa9.24□□□□□ -0.93
RETREG3-208ENST00000589797 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.24□□□□□ -0.93
RETREG3-208ENST00000589797 H0Y9P7 68 aa9.24□□□□□ -0.93
RETREG3-208ENST00000589797 WWC2-AS2Q96NR7 200 aa9.23□□□□□ -0.93
RETREG3-208ENST00000589797 PSORS1C2Q9UIG4 136 aa9.22□□□□□ -0.93
RETREG3-208ENST00000589797 TNP2Q05952 138 aa9.21□□□□□ -0.93
RETREG3-208ENST00000589797 LINC01600Q96MT4 127 aa9.21□□□□□ -0.94
RETREG3-208ENST00000589797 SMR3BP02814 79 aaPredicted RBP9.2□□□□□ -0.94
RETREG3-208ENST00000589797 CNBPP62633 177 aaKnown RBP9.2□□□□□ -0.94
RETREG3-208ENST00000589797 DMBT1Q9UGM3 2413 aaPredicted RBP9.2□□□□□ -0.94
RETREG3-208ENST00000589797 PLA2G2DQ9UNK4 145 aa9.19□□□□□ -0.94
RETREG3-208ENST00000589797 C1orf64Q8NEQ6 169 aa9.17□□□□□ -0.94
RETREG3-208ENST00000589797 hDV103S1A0JD37 113 aa9.17□□□□□ -0.94
RETREG3-208ENST00000589797 SPTSSBQ8NFR3 76 aa9.17□□□□□ -0.94
RETREG3-208ENST00000589797 PSPHP1O15172 72 aa9.15□□□□□ -0.94
RETREG3-208ENST00000589797 IGLV5-48A0A075B6I7 105 aa9.14□□□□□ -0.95
RETREG3-208ENST00000589797 SERP1Q9Y6X1 66 aa9.14□□□□□ -0.95
RETREG3-208ENST00000589797 PANO1I0J062 215 aa9.13□□□□□ -0.95
RETREG3-208ENST00000589797 ZNF861PO60384 105 aa9.12□□□□□ -0.95
RETREG3-208ENST00000589797 SMIM26A0A096LP01 95 aa9.12□□□□□ -0.95
RETREG3-208ENST00000589797 CYSTM1Q9H1C7 97 aa9.11□□□□□ -0.95
RETREG3-208ENST00000589797 SRRM2Q9UQ35 2752 aaKnown RBP9.1□□□□□ -0.95
RETREG3-208ENST00000589797 PLA2G1BP04054 148 aaKnown RBP9.09□□□□□ -0.95
RETREG3-208ENST00000589797 IGLV5-37A0A075B6J1 123 aa9.09□□□□□ -0.95
RETREG3-208ENST00000589797 IGKV2D-30A0A075B6S6 120 aa9.09□□□□□ -0.95
RETREG3-208ENST00000589797 IGKV2-30P06310 120 aa9.09□□□□□ -0.95
RETREG3-208ENST00000589797 A0A1B0GW54 56 aa9.06□□□□□ -0.96
RETREG3-208ENST00000589797 SPINK1P00995 79 aa9.06□□□□□ -0.96
RETREG3-208ENST00000589797 A8MWP4 228 aa9.06□□□□□ -0.96
RETREG3-208ENST00000589797 FLG2Q5D862 2391 aaPredicted RBP9.06□□□□□ -0.96
RETREG3-208ENST00000589797 ATP5EP56381 51 aaPredicted RBP9.06□□□□□ -0.96
RETREG3-208ENST00000589797 SPRR4Q96PI1 79 aa9.06□□□□□ -0.96
RETREG3-208ENST00000589797 SPRR1AP35321 89 aa9.05□□□□□ -0.96
RETREG3-208ENST00000589797 ANK3Q12955 4377 aaKnown RBP9.05□□□□□ -0.96
RETREG3-208ENST00000589797 C1orf195Q5TG92 126 aa9.05□□□□□ -0.96
RETREG3-208ENST00000589797 TYMSOSQ8TAI1 123 aa9.05□□□□□ -0.96
RETREG3-208ENST00000589797 PRR15Q8IV56 129 aa9.04□□□□□ -0.96
RETREG3-208ENST00000589797 DSCR10P59022 87 aa9.04□□□□□ -0.96
RETREG3-208ENST00000589797 V9GYY9 64 aa9.04□□□□□ -0.96
RETREG3-208ENST00000589797 H7BZZ5 65 aa9.04□□□□□ -0.96
RETREG3-208ENST00000589797 TRAV22A0A0B4J277 110 aa9.03□□□□□ -0.96
RETREG3-208ENST00000589797 IGLV7-43P04211 117 aa9.02□□□□□ -0.97
RETREG3-208ENST00000589797 KRTAP11-1Q8IUC1 163 aa9.01□□□□□ -0.97
RETREG3-208ENST00000589797 KRTAP7-1Q8IUC3 87 aa9.01□□□□□ -0.97
RETREG3-208ENST00000589797 A6NED7 52 aa8.99□□□□□ -0.97
RETREG3-208ENST00000589797 KLKP1Q107X0 134 aa8.99□□□□□ -0.97
RETREG3-208ENST00000589797 PRR15LQ9BU68 103 aa8.99□□□□□ -0.97
RETREG3-208ENST00000589797 LINC00313P59037 77 aa8.97□□□□□ -0.97
RETREG3-208ENST00000589797 C8orf17Q9NRJ1 99 aa8.95□□□□□ -0.98
RETREG3-208ENST00000589797 KRTAP4-16G5E9R7 235 aaPredicted RBP8.95□□□□□ -0.98
RETREG3-208ENST00000589797 KRTAP10-2P60368 255 aa8.95□□□□□ -0.98
RETREG3-208ENST00000589797 OCR1Q9BZK8 76 aa8.93□□□□□ -0.98
RETREG3-208ENST00000589797 SPAG11AQ6PDA7 123 aa8.93□□□□□ -0.98
RETREG3-208ENST00000589797 LINC00336Q6ZUF6 198 aa8.93□□□□□ -0.98
RETREG3-208ENST00000589797 MRPL34Q9BQ48 92 aaKnown RBP8.93□□□□□ -0.98
RETREG3-208ENST00000589797 LIMD2Q9BT23 127 aa8.93□□□□□ -0.98
RETREG3-208ENST00000589797 RPS28P62857 69 aaKnown RBP8.92□□□□□ -0.98
RETREG3-208ENST00000589797 Q96NJ1 140 aa8.92□□□□□ -0.98
RETREG3-208ENST00000589797 PRO0628Q9UI54 55 aa8.91□□□□□ -0.98
RETREG3-208ENST00000589797 A0A1B0GVX0 72 aa8.9□□□□□ -0.98
RETREG3-208ENST00000589797 PMAIP1Q13794 54 aa8.9□□□□□ -0.99
RETREG3-208ENST00000589797 TP53AIP1Q9HCN2 124 aa8.9□□□□□ -0.99
RETREG3-208ENST00000589797 C9orf92A6NGG3 77 aa8.88□□□□□ -0.99
RETREG3-208ENST00000589797 SSBP3-AS1Q7Z2R9 100 aa8.87□□□□□ -0.99
RETREG3-208ENST00000589797 SEC61GP60059 68 aa8.86□□□□□ -0.99
RETREG3-208ENST00000589797 FBN3Q75N90 2809 aa8.85□□□□□ -0.99
RETREG3-208ENST00000589797 PLAC8Q9NZF1 115 aa8.84□□□□□ -0.99
RETREG3-208ENST00000589797 KRTAP10-1P60331 282 aa8.83□□□□□ -1
RETREG3-208ENST00000589797 CSMD3Q7Z407 3707 aa8.83□□□□□ -1
RETREG3-208ENST00000589797 PRR26Q8N8Z3 221 aa8.83□□□□□ -1
RETREG3-208ENST00000589797 FAM229AH3BQW9 127 aa8.82□□□□□ -1
RETREG3-208ENST00000589797 Q6ZRN7 208 aaPredicted RBP8.82□□□□□ -1
RETREG3-208ENST00000589797 A8MUN3 132 aa8.81□□□□□ -1
RETREG3-208ENST00000589797 IGLV8-61A0A075B6I0 122 aa8.81□□□□□ -1
RETREG3-208ENST00000589797 C7orf65Q6ZTY9 151 aa8.8□□□□□ -1
RETREG3-208ENST00000589797 LINC00304Q8N9R0 145 aa8.79□□□□□ -1
RETREG3-208ENST00000589797 Q6ZR54 194 aa8.79□□□□□ -1
RETREG3-208ENST00000589797 LINC00472Q9H8W2 130 aa8.78□□□□□ -1
RETREG3-208ENST00000589797 COA5Q86WW8 74 aa8.77□□□□□ -1.01
RETREG3-208ENST00000589797 COL7A1Q02388 2944 aa8.76□□□□□ -1.01
RETREG3-208ENST00000589797 H3BPC8 53 aa8.75□□□□□ -1.01
RETREG3-208ENST00000589797 SPRR1BP22528 89 aa8.74□□□□□ -1.01
RETREG3-208ENST00000589797 MMP24-AS1A0A0U1RRL7 71 aa8.73□□□□□ -1.01
RETREG3-208ENST00000589797 OXTP01178 125 aa8.72□□□□□ -1.01
RETREG3-208ENST00000589797 ACYP2P14621 99 aa8.72□□□□□ -1.01
RETREG3-208ENST00000589797 LOC101927531A0A1B0GV80 90 aa8.71□□□□□ -1.02
RETREG3-208ENST00000589797 FAM229BQ4G0N7 80 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms