RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 TAX1BP3O14907 124 aa6.14□□□□□ -1.43
SDF2-208ENST00000589788 SPRR1AP35321 89 aa6.14□□□□□ -1.43
SDF2-208ENST00000589788 FAM229BQ4G0N7 80 aa6.14□□□□□ -1.43
SDF2-208ENST00000589788 TYMSOSQ8TAI1 123 aa6.14□□□□□ -1.43
SDF2-208ENST00000589788 ANAPC11Q9NYG5 84 aa6.14□□□□□ -1.43
SDF2-208ENST00000589788 ZNF73O43830 326 aaPredicted RBP6.13□□□□□ -1.43
SDF2-208ENST00000589788 C6orf99Q4VX62 202 aa6.12□□□□□ -1.43
SDF2-208ENST00000589788 ZNF706Q9Y5V0 76 aaPredicted RBP6.12□□□□□ -1.43
SDF2-208ENST00000589788 TRBV7-6A0A0J9YX20 115 aa6.11□□□□□ -1.43
SDF2-208ENST00000589788 KRTAP4-16G5E9R7 235 aaPredicted RBP6.11□□□□□ -1.43
SDF2-208ENST00000589788 PSMB2P49721 201 aa6.11□□□□□ -1.43
SDF2-208ENST00000589788 SEC61BP60468 96 aaKnown RBP6.11□□□□□ -1.43
SDF2-208ENST00000589788 H3BUT2 72 aa6.1□□□□□ -1.43
SDF2-208ENST00000589788 COX6CP09669 75 aa6.1□□□□□ -1.43
SDF2-208ENST00000589788 VAMP3Q15836 100 aa6.1□□□□□ -1.43
SDF2-208ENST00000589788 SMCR5Q8TEV8 140 aa6.1□□□□□ -1.43
SDF2-208ENST00000589788 SPRR4Q96PI1 79 aa6.1□□□□□ -1.43
SDF2-208ENST00000589788 NAA38Q9BRA0 125 aaKnown RBP6.1□□□□□ -1.43
SDF2-208ENST00000589788 ELOF1P60002 83 aaKnown RBP6.09□□□□□ -1.43
SDF2-208ENST00000589788 KRTAP13-2Q52LG2 175 aa6.09□□□□□ -1.43
SDF2-208ENST00000589788 LYRM7Q5U5X0 104 aa6.09□□□□□ -1.43
SDF2-208ENST00000589788 Q6ZRX8 168 aa6.09□□□□□ -1.43
SDF2-208ENST00000589788 A0A1W2PPM0 123 aa6.08□□□□□ -1.44
SDF2-208ENST00000589788 H0YGX0 51 aa6.08□□□□□ -1.44
SDF2-208ENST00000589788 COX7BP24311 80 aa6.08□□□□□ -1.44
SDF2-208ENST00000589788 TNXBP22105 4242 aa6.08□□□□□ -1.44
SDF2-208ENST00000589788 SCGB1C2P0DMR2 95 aa6.06□□□□□ -1.44
SDF2-208ENST00000589788 FABP2P12104 132 aa6.06□□□□□ -1.44
SDF2-208ENST00000589788 LINC00304Q8N9R0 145 aa6.06□□□□□ -1.44
SDF2-208ENST00000589788 Q9BRP9 147 aa6.06□□□□□ -1.44
SDF2-208ENST00000589788 ERC2-IT1O76042 136 aa6.05□□□□□ -1.44
SDF2-208ENST00000589788 GAGE2AQ6NT46 116 aa6.05□□□□□ -1.44
SDF2-208ENST00000589788 LINC00575Q6W349 94 aa6.05□□□□□ -1.44
SDF2-208ENST00000589788 C3orf22Q8N5N4 141 aa6.05□□□□□ -1.44
SDF2-208ENST00000589788 TRBV20-1A0A075B6N2 111 aa6.04□□□□□ -1.44
SDF2-208ENST00000589788 A0A1B0GX51 115 aa6.04□□□□□ -1.44
SDF2-208ENST00000589788 PRR4Q16378 134 aa6.04□□□□□ -1.44
SDF2-208ENST00000589788 CLEC2BQ92478 149 aa6.04□□□□□ -1.44
SDF2-208ENST00000589788 FAM218AQ96MZ4 157 aa6.04□□□□□ -1.44
SDF2-208ENST00000589788 DHRS4-AS1Q9P1J3 65 aa6.04□□□□□ -1.44
SDF2-208ENST00000589788 LST1O00453 97 aa6.03□□□□□ -1.44
SDF2-208ENST00000589788 SLC25A20O43772 301 aa6.03□□□□□ -1.44
SDF2-208ENST00000589788 TCL1BO95988 128 aa6.03□□□□□ -1.44
SDF2-208ENST00000589788 LINC00483Q53H64 154 aa6.03□□□□□ -1.44
SDF2-208ENST00000589788 Q75L30 129 aa6.03□□□□□ -1.44
SDF2-208ENST00000589788 hADV29S1A0JD25 119 aa6.02□□□□□ -1.45
SDF2-208ENST00000589788 SNCGO76070 127 aa6.02□□□□□ -1.45
SDF2-208ENST00000589788 TRACP01848 142 aa6.02□□□□□ -1.45
SDF2-208ENST00000589788 UBE2V1Q13404 147 aa6.02□□□□□ -1.45
SDF2-208ENST00000589788 ATXN8Q156A1 80 aa6.02□□□□□ -1.45
SDF2-208ENST00000589788 SPCS1Q9Y6A9 102 aa6.02□□□□□ -1.45
SDF2-208ENST00000589788 HMCN2Q8NDA2 5059 aa6.02□□□□□ -1.45
SDF2-208ENST00000589788 SPAG11AQ6PDA7 123 aa6.01□□□□□ -1.45
SDF2-208ENST00000589788 IGLV9-49A0A0B4J1Y8 123 aa6□□□□□ -1.45
SDF2-208ENST00000589788 K7EP34 96 aa6□□□□□ -1.45
SDF2-208ENST00000589788 DNAL4O96015 105 aa5.99□□□□□ -1.45
SDF2-208ENST00000589788 MOBPQ13875 183 aa5.99□□□□□ -1.45
SDF2-208ENST00000589788 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.99□□□□□ -1.45
SDF2-208ENST00000589788 Q8NBF4 154 aa5.99□□□□□ -1.45
SDF2-208ENST00000589788 A0A1B0GV90 55 aa5.99□□□□□ -1.45
SDF2-208ENST00000589788 Q6ZQY7 126 aa5.99□□□□□ -1.45
SDF2-208ENST00000589788 GTF2H5Q6ZYL4 71 aa5.99□□□□□ -1.45
SDF2-208ENST00000589788 ST20-AS1Q8NBB2 130 aa5.99□□□□□ -1.45
SDF2-208ENST00000589788 H3BMG7 143 aa5.98□□□□□ -1.45
SDF2-208ENST00000589788 OCIAD2Q56VL3 154 aa5.98□□□□□ -1.45
SDF2-208ENST00000589788 C9orf153Q5TBE3 101 aa5.98□□□□□ -1.45
SDF2-208ENST00000589788 SSBP3-AS1Q7Z2R9 100 aa5.98□□□□□ -1.45
SDF2-208ENST00000589788 RETNLBQ9BQ08 111 aa5.98□□□□□ -1.45
SDF2-208ENST00000589788 IGLV5-48A0A075B6I7 105 aa5.96□□□□□ -1.46
SDF2-208ENST00000589788 ORMDL1Q9P0S3 153 aa5.96□□□□□ -1.46
SDF2-208ENST00000589788 C9JAW5 83 aa5.95□□□□□ -1.46
SDF2-208ENST00000589788 H3BQ85 93 aa5.95□□□□□ -1.46
SDF2-208ENST00000589788 SPINK1P00995 79 aa5.95□□□□□ -1.46
SDF2-208ENST00000589788 IGKV2-30P06310 120 aa5.95□□□□□ -1.46
SDF2-208ENST00000589788 DEFB105AQ8NG35 78 aa5.95□□□□□ -1.46
SDF2-208ENST00000589788 PPDPFLQ8WWR9 84 aa5.95□□□□□ -1.46
SDF2-208ENST00000589788 LAMTOR3Q9UHA4 124 aa5.95□□□□□ -1.46
SDF2-208ENST00000589788 TEX49A0A1B0GTD5 131 aa5.94□□□□□ -1.46
SDF2-208ENST00000589788 SPRR1BP22528 89 aa5.94□□□□□ -1.46
SDF2-208ENST00000589788 LINC01547P58512 204 aaPredicted RBP5.94□□□□□ -1.46
SDF2-208ENST00000589788 H3BT86 120 aa5.93□□□□□ -1.46
SDF2-208ENST00000589788 TMEM256-PLSCR3K7ERE1 68 aa5.93□□□□□ -1.46
SDF2-208ENST00000589788 IGLV7-46A0A075B6I9 117 aa5.92□□□□□ -1.46
SDF2-208ENST00000589788 BAALC-AS2P0C853 105 aa5.92□□□□□ -1.46
SDF2-208ENST00000589788 Q8N377 158 aa5.92□□□□□ -1.46
SDF2-208ENST00000589788 PRO0461Q9UI25 63 aa5.92□□□□□ -1.46
SDF2-208ENST00000589788 F8W1H4 67 aa5.91□□□□□ -1.46
SDF2-208ENST00000589788 MTURNQ8N3F0 131 aa5.91□□□□□ -1.46
SDF2-208ENST00000589788 UBR4Q5T4S7 5183 aa5.91□□□□□ -1.46
SDF2-208ENST00000589788 RPS29P62273 56 aaKnown RBP5.9□□□□□ -1.47
SDF2-208ENST00000589788 ANKRD29Q8N6D5 301 aa5.9□□□□□ -1.47
SDF2-208ENST00000589788 FP248Q71RG6 208 aaPredicted RBP5.89□□□□□ -1.47
SDF2-208ENST00000589788 SMIM29Q86T20 159 aa5.89□□□□□ -1.47
SDF2-208ENST00000589788 NDUFV3P56181 108 aaKnown RBP5.88□□□□□ -1.47
SDF2-208ENST00000589788 LRP2P98164 4655 aa5.87□□□□□ -1.47
SDF2-208ENST00000589788 TPRXLQ17RH7 258 aa5.87□□□□□ -1.47
SDF2-208ENST00000589788 HRCT1Q6UXD1 115 aa5.87□□□□□ -1.47
SDF2-208ENST00000589788 F8WEM9 126 aa5.86□□□□□ -1.47
SDF2-208ENST00000589788 Q8N9P0 234 aaPredicted RBP5.86□□□□□ -1.47
SDF2-208ENST00000589788 JMJD7-PLA2G4BH0Y9G9 81 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms