RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 BCE1O60756 84 aa6.28□□□□□ -1.4
VPS25-202ENST00000589219 C3orf22Q8N5N4 141 aa6.28□□□□□ -1.4
VPS25-202ENST00000589219 DEFB105AQ8NG35 78 aa6.28□□□□□ -1.4
VPS25-202ENST00000589219 A0A087WVE0 104 aa6.27□□□□□ -1.41
VPS25-202ENST00000589219 COX7CP15954 63 aa6.27□□□□□ -1.41
VPS25-202ENST00000589219 FUSP35637 526 aaKnown RBP eCLIP6.27□□□□□ -1.41
VPS25-202ENST00000589219 FAM19A1Q7Z5A9 133 aa6.27□□□□□ -1.41
VPS25-202ENST00000589219 PCLOQ9Y6V0 5065 aa6.27□□□□□ -1.41
VPS25-202ENST00000589219 PKHD1P08F94 4074 aa6.26□□□□□ -1.41
VPS25-202ENST00000589219 F8WEM9 126 aa6.26□□□□□ -1.41
VPS25-202ENST00000589219 H0Y9J4 135 aa6.26□□□□□ -1.41
VPS25-202ENST00000589219 HAMPP81172 84 aa6.26□□□□□ -1.41
VPS25-202ENST00000589219 ST20-AS1Q8NBB2 130 aa6.26□□□□□ -1.41
VPS25-202ENST00000589219 ERC2-IT1O76042 136 aa6.25□□□□□ -1.41
VPS25-202ENST00000589219 C1orf137Q5JT78 98 aa6.25□□□□□ -1.41
VPS25-202ENST00000589219 SERP2Q8N6R1 65 aa6.25□□□□□ -1.41
VPS25-202ENST00000589219 Q8NBF4 154 aa6.25□□□□□ -1.41
VPS25-202ENST00000589219 FAT2Q9NYQ8 4349 aa6.25□□□□□ -1.41
VPS25-202ENST00000589219 DNAH2Q9P225 4427 aa6.24□□□□□ -1.41
VPS25-202ENST00000589219 CHTF8P0CG12 524 aa6.24□□□□□ -1.41
VPS25-202ENST00000589219 C9orf153Q5TBE3 101 aa6.24□□□□□ -1.41
VPS25-202ENST00000589219 DNAH17Q9UFH2 4485 aa6.24□□□□□ -1.41
VPS25-202ENST00000589219 A0A087WTM6 91 aa6.23□□□□□ -1.41
VPS25-202ENST00000589219 NREPQ16612 68 aa6.23□□□□□ -1.41
VPS25-202ENST00000589219 PHF5AQ7RTV0 110 aaKnown RBP6.23□□□□□ -1.41
VPS25-202ENST00000589219 SMIM20Q8N5G0 67 aa6.23□□□□□ -1.41
VPS25-202ENST00000589219 PKD1P98161 4303 aa6.23□□□□□ -1.41
VPS25-202ENST00000589219 IGLV8-61A0A075B6I0 122 aa6.22□□□□□ -1.41
VPS25-202ENST00000589219 EPM2AB3EWF7 344 aa6.22□□□□□ -1.41
VPS25-202ENST00000589219 PRLHP81277 87 aa6.22□□□□□ -1.41
VPS25-202ENST00000589219 SPACA4Q8TDM5 124 aa6.22□□□□□ -1.41
VPS25-202ENST00000589219 SPRR4Q96PI1 79 aa6.22□□□□□ -1.41
VPS25-202ENST00000589219 A0A1W2PNM2 257 aa6.21□□□□□ -1.42
VPS25-202ENST00000589219 CRYGAP11844 174 aa6.21□□□□□ -1.42
VPS25-202ENST00000589219 SPRR1BP22528 89 aa6.21□□□□□ -1.42
VPS25-202ENST00000589219 SMIM29Q86T20 159 aa6.21□□□□□ -1.42
VPS25-202ENST00000589219 HIGD2AQ9BW72 106 aa6.21□□□□□ -1.42
VPS25-202ENST00000589219 KRTAP4-8Q9BYQ9 185 aa6.21□□□□□ -1.42
VPS25-202ENST00000589219 CDK2AP2O75956 126 aa6.2□□□□□ -1.42
VPS25-202ENST00000589219 UBE2AP49459 152 aa6.2□□□□□ -1.42
VPS25-202ENST00000589219 BPY2O14599 106 aa6.19□□□□□ -1.42
VPS25-202ENST00000589219 SCXQ7RTU7 201 aa6.18□□□□□ -1.42
VPS25-202ENST00000589219 TRAV7A0A075B6U4 112 aa6.17□□□□□ -1.42
VPS25-202ENST00000589219 KRTAP13-1Q8IUC0 172 aa6.17□□□□□ -1.42
VPS25-202ENST00000589219 KRTAP11-1Q8IUC1 163 aa6.17□□□□□ -1.42
VPS25-202ENST00000589219 SS18L2Q9UHA2 77 aa6.17□□□□□ -1.42
VPS25-202ENST00000589219 DNAH11Q96DT5 4516 aa6.17□□□□□ -1.42
VPS25-202ENST00000589219 IGKV4-1P06312 121 aa6.16□□□□□ -1.42
VPS25-202ENST00000589219 IGFL1Q6UW32 110 aa6.16□□□□□ -1.42
VPS25-202ENST00000589219 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.16□□□□□ -1.42
VPS25-202ENST00000589219 RYR1P21817 5038 aa6.16□□□□□ -1.42
VPS25-202ENST00000589219 DYNC1H1Q14204 4646 aaKnown RBP6.15□□□□□ -1.42
VPS25-202ENST00000589219 PANO1I0J062 215 aa6.15□□□□□ -1.42
VPS25-202ENST00000589219 DPH3Q96FX2 82 aa6.15□□□□□ -1.42
VPS25-202ENST00000589219 IGLV5-52A0A0A0MRZ9 124 aa6.14□□□□□ -1.43
VPS25-202ENST00000589219 KRTAP4-5Q9BYR2 181 aa6.14□□□□□ -1.43
VPS25-202ENST00000589219 PLAC8Q9NZF1 115 aa6.14□□□□□ -1.43
VPS25-202ENST00000589219 ZNF706Q9Y5V0 76 aaPredicted RBP6.14□□□□□ -1.43
VPS25-202ENST00000589219 Q8N1X5 172 aa6.13□□□□□ -1.43
VPS25-202ENST00000589219 TMEM258P61165 79 aa6.12□□□□□ -1.43
VPS25-202ENST00000589219 KRTAP10-2P60368 255 aa6.11□□□□□ -1.43
VPS25-202ENST00000589219 ABCA13Q86UQ4 5058 aa6.11□□□□□ -1.43
VPS25-202ENST00000589219 FAM229AH3BQW9 127 aa6.1□□□□□ -1.43
VPS25-202ENST00000589219 RPL37AP61513 92 aaKnown RBP6.1□□□□□ -1.43
VPS25-202ENST00000589219 LINC00483Q53H64 154 aa6.1□□□□□ -1.43
VPS25-202ENST00000589219 Q8N9L7 120 aa6.1□□□□□ -1.43
VPS25-202ENST00000589219 KRTAP9-2Q9BYQ4 174 aa6.1□□□□□ -1.43
VPS25-202ENST00000589219 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.09□□□□□ -1.43
VPS25-202ENST00000589219 HSPG2P98160 4391 aa6.09□□□□□ -1.43
VPS25-202ENST00000589219 A0A087WSZ3 146 aa6.08□□□□□ -1.44
VPS25-202ENST00000589219 C20orf197Q8N268 126 aa6.08□□□□□ -1.44
VPS25-202ENST00000589219 LRP1BQ9NZR2 4599 aa6.08□□□□□ -1.44
VPS25-202ENST00000589219 DSCR10P59022 87 aa6.07□□□□□ -1.44
VPS25-202ENST00000589219 KLKP1Q107X0 134 aa6.07□□□□□ -1.44
VPS25-202ENST00000589219 PSORS1C2Q9UIG4 136 aa6.07□□□□□ -1.44
VPS25-202ENST00000589219 KRTAP9-6A0A140TA67 174 aa6.05□□□□□ -1.44
VPS25-202ENST00000589219 K7EQZ3 153 aa6.05□□□□□ -1.44
VPS25-202ENST00000589219 NDUFC1O43677 76 aa6.05□□□□□ -1.44
VPS25-202ENST00000589219 ZNF861PO60384 105 aa6.05□□□□□ -1.44
VPS25-202ENST00000589219 OCR1Q9BZK8 76 aa6.05□□□□□ -1.44
VPS25-202ENST00000589219 CYSTM1Q9H1C7 97 aa6.05□□□□□ -1.44
VPS25-202ENST00000589219 DNAH5Q8TE73 4624 aa6.04□□□□□ -1.44
VPS25-202ENST00000589219 A0A0G2JQZ4 141 aa6.03□□□□□ -1.44
VPS25-202ENST00000589219 HCG22E2RYF7 251 aa6.03□□□□□ -1.44
VPS25-202ENST00000589219 J3KT08 172 aa6.03□□□□□ -1.44
VPS25-202ENST00000589219 APOBP04114 4563 aaKnown RBP6.02□□□□□ -1.45
VPS25-202ENST00000589219 TMEM254Q8TBM7 123 aa6.02□□□□□ -1.45
VPS25-202ENST00000589219 IGLV9-49A0A0B4J1Y8 123 aa6.01□□□□□ -1.45
VPS25-202ENST00000589219 FAM236DA0A1B0GTK5 79 aa6.01□□□□□ -1.45
VPS25-202ENST00000589219 FAM236CP0DP71 79 aa6.01□□□□□ -1.45
VPS25-202ENST00000589219 LINC00472Q9H8W2 130 aa6.01□□□□□ -1.45
VPS25-202ENST00000589219 A8MWP4 228 aa6□□□□□ -1.45
VPS25-202ENST00000589219 H7BZZ5 65 aa6□□□□□ -1.45
VPS25-202ENST00000589219 IGLV7-43P04211 117 aa6□□□□□ -1.45
VPS25-202ENST00000589219 ATP5EP56381 51 aaPredicted RBP6□□□□□ -1.45
VPS25-202ENST00000589219 KRTAP10-1P60331 282 aa6□□□□□ -1.45
VPS25-202ENST00000589219 RPS28P62857 69 aaKnown RBP5.99□□□□□ -1.45
VPS25-202ENST00000589219 Q5VSD8 79 aa5.99□□□□□ -1.45
VPS25-202ENST00000589219 DNAH8Q96JB1 4490 aa5.98□□□□□ -1.45
VPS25-202ENST00000589219 A0A0U1RQV1 116 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms