RNA–Protein interactions for RNA: ENST00000588472.6

SDF2-207, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 681 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-207ENST00000588472 Q6ZVH6 145 aa5.05□□□□□ -1.6
SDF2-207ENST00000588472 NHP2Q9NX24 153 aaKnown RBP5.05□□□□□ -1.6
SDF2-207ENST00000588472 SPINK1P00995 79 aa5.04□□□□□ -1.6
SDF2-207ENST00000588472 SSBP3-AS1Q7Z2R9 100 aa5.04□□□□□ -1.6
SDF2-207ENST00000588472 DHRS4-AS1Q9P1J3 65 aa5.04□□□□□ -1.6
SDF2-207ENST00000588472 K7ERJ3 54 aa5.03□□□□□ -1.6
SDF2-207ENST00000588472 ELOF1P60002 83 aaKnown RBP5.03□□□□□ -1.6
SDF2-207ENST00000588472 VAMP3Q15836 100 aa5.03□□□□□ -1.6
SDF2-207ENST00000588472 HRCT1Q6UXD1 115 aa5.03□□□□□ -1.6
SDF2-207ENST00000588472 RAB37Q96AX2 223 aa5.03□□□□□ -1.6
SDF2-207ENST00000588472 FAT4Q6V0I7 4981 aa5.02□□□□□ -1.61
SDF2-207ENST00000588472 TAX1BP3O14907 124 aa5.02□□□□□ -1.61
SDF2-207ENST00000588472 Q1RN00 199 aa5.02□□□□□ -1.61
SDF2-207ENST00000588472 TRAV13-2A0A0B4J235 113 aa5.01□□□□□ -1.61
SDF2-207ENST00000588472 C9orf118A6NHY6 69 aa5.01□□□□□ -1.61
SDF2-207ENST00000588472 TPRXLQ17RH7 258 aa5.01□□□□□ -1.61
SDF2-207ENST00000588472 SMIM11BQ8TCY0 68 aa5.01□□□□□ -1.61
SDF2-207ENST00000588472 LAMTOR3Q9UHA4 124 aa5.01□□□□□ -1.61
SDF2-207ENST00000588472 A0A1B0GWB2 263 aa5□□□□□ -1.61
SDF2-207ENST00000588472 A4D1N5 150 aa5□□□□□ -1.61
SDF2-207ENST00000588472 H3BUT2 72 aa5□□□□□ -1.61
SDF2-207ENST00000588472 FABP2P12104 132 aa5□□□□□ -1.61
SDF2-207ENST00000588472 LYRM7Q5U5X0 104 aa5□□□□□ -1.61
SDF2-207ENST00000588472 Q8N377 158 aa5□□□□□ -1.61
SDF2-207ENST00000588472 A0A0B4J2C4 111 aa4.99□□□□□ -1.61
SDF2-207ENST00000588472 TRBV7-6A0A0J9YX20 115 aa4.99□□□□□ -1.61
SDF2-207ENST00000588472 GTF2H5Q6ZYL4 71 aa4.99□□□□□ -1.61
SDF2-207ENST00000588472 FP248Q71RG6 208 aaPredicted RBP4.99□□□□□ -1.61
SDF2-207ENST00000588472 NAA38Q9BRA0 125 aaKnown RBP4.99□□□□□ -1.61
SDF2-207ENST00000588472 TEX49A0A1B0GTD5 131 aa4.98□□□□□ -1.61
SDF2-207ENST00000588472 H7C2G1 150 aa4.98□□□□□ -1.61
SDF2-207ENST00000588472 SLC25A20O43772 301 aa4.98□□□□□ -1.61
SDF2-207ENST00000588472 CFC1BP0CG36 223 aa4.98□□□□□ -1.61
SDF2-207ENST00000588472 CFC1P0CG37 223 aa4.98□□□□□ -1.61
SDF2-207ENST00000588472 SPRR1BP22528 89 aa4.98□□□□□ -1.61
SDF2-207ENST00000588472 PSMB2P49721 201 aa4.98□□□□□ -1.61
SDF2-207ENST00000588472 PRO1854Q9UHT4 67 aa4.98□□□□□ -1.61
SDF2-207ENST00000588472 A0A1W2PPM0 123 aa4.97□□□□□ -1.61
SDF2-207ENST00000588472 MUC17Q685J3 4493 aa4.97□□□□□ -1.61
SDF2-207ENST00000588472 A0A0G2JQZ4 141 aa4.96□□□□□ -1.62
SDF2-207ENST00000588472 SCGB1C2P0DMR2 95 aa4.96□□□□□ -1.62
SDF2-207ENST00000588472 RPS29P62273 56 aaKnown RBP4.96□□□□□ -1.62
SDF2-207ENST00000588472 KRTAP13-3Q3SY46 172 aa4.96□□□□□ -1.62
SDF2-207ENST00000588472 SPCS1Q9Y6A9 102 aa4.96□□□□□ -1.62
SDF2-207ENST00000588472 KRTAP19-1Q8IUB9 90 aa4.95□□□□□ -1.62
SDF2-207ENST00000588472 K7EP34 96 aa4.94□□□□□ -1.62
SDF2-207ENST00000588472 COX6CP09669 75 aa4.94□□□□□ -1.62
SDF2-207ENST00000588472 LINC01547P58512 204 aaPredicted RBP4.94□□□□□ -1.62
SDF2-207ENST00000588472 UBE2V1Q13404 147 aa4.94□□□□□ -1.62
SDF2-207ENST00000588472 SMIM29Q86T20 159 aa4.94□□□□□ -1.62
SDF2-207ENST00000588472 LIMD2Q9BT23 127 aa4.94□□□□□ -1.62
SDF2-207ENST00000588472 IGLV5-48A0A075B6I7 105 aa4.93□□□□□ -1.62
SDF2-207ENST00000588472 hADV29S1A0JD25 119 aa4.93□□□□□ -1.62
SDF2-207ENST00000588472 LINC00575Q6W349 94 aa4.93□□□□□ -1.62
SDF2-207ENST00000588472 TRBV20-1A0A075B6N2 111 aa4.91□□□□□ -1.62
SDF2-207ENST00000588472 C9orf92A6NGG3 77 aa4.91□□□□□ -1.62
SDF2-207ENST00000588472 F8WEM9 126 aa4.91□□□□□ -1.62
SDF2-207ENST00000588472 Q6ZQY7 126 aa4.91□□□□□ -1.62
SDF2-207ENST00000588472 TRIAP1O43715 76 aa4.9□□□□□ -1.63
SDF2-207ENST00000588472 CD164Q04900 197 aa4.9□□□□□ -1.63
SDF2-207ENST00000588472 ATXN8Q156A1 80 aa4.9□□□□□ -1.63
SDF2-207ENST00000588472 SEC61BP60468 96 aaKnown RBP4.88□□□□□ -1.63
SDF2-207ENST00000588472 ASB16-AS1Q495Z4 193 aa4.88□□□□□ -1.63
SDF2-207ENST00000588472 KRTAP4-7Q9BYR0 210 aa4.88□□□□□ -1.63
SDF2-207ENST00000588472 CRCT1Q9UGL9 99 aa4.88□□□□□ -1.63
SDF2-207ENST00000588472 H3BMG7 143 aa4.87□□□□□ -1.63
SDF2-207ENST00000588472 TCL1BO95988 128 aa4.87□□□□□ -1.63
SDF2-207ENST00000588472 SNCGO76070 127 aa4.86□□□□□ -1.63
SDF2-207ENST00000588472 OCIAD2Q56VL3 154 aa4.86□□□□□ -1.63
SDF2-207ENST00000588472 C1orf195Q5TG92 126 aa4.86□□□□□ -1.63
SDF2-207ENST00000588472 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.86□□□□□ -1.63
SDF2-207ENST00000588472 F8W1H4 67 aa4.85□□□□□ -1.63
SDF2-207ENST00000588472 IGFL1Q6UW32 110 aa4.85□□□□□ -1.63
SDF2-207ENST00000588472 CLEC2BQ92478 149 aa4.85□□□□□ -1.63
SDF2-207ENST00000588472 C9JAW5 83 aa4.84□□□□□ -1.63
SDF2-207ENST00000588472 H0YGX0 51 aa4.84□□□□□ -1.63
SDF2-207ENST00000588472 DNAL4O96015 105 aa4.84□□□□□ -1.63
SDF2-207ENST00000588472 MTURNQ8N3F0 131 aa4.84□□□□□ -1.63
SDF2-207ENST00000588472 FAM218AQ96MZ4 157 aa4.84□□□□□ -1.63
SDF2-207ENST00000588472 KRTAP4-1Q9BYQ7 146 aa4.84□□□□□ -1.63
SDF2-207ENST00000588472 LST1O00453 97 aa4.83□□□□□ -1.64
SDF2-207ENST00000588472 LCE1DQ5T752 114 aa4.83□□□□□ -1.64
SDF2-207ENST00000588472 Q5XG85 94 aa4.83□□□□□ -1.64
SDF2-207ENST00000588472 Q6JHZ5 121 aa4.83□□□□□ -1.64
SDF2-207ENST00000588472 PCOTHQ58A44 107 aa4.82□□□□□ -1.64
SDF2-207ENST00000588472 IGLV8-61A0A075B6I0 122 aa4.81□□□□□ -1.64
SDF2-207ENST00000588472 TRBV7-7A0A0K0K1E9 115 aa4.81□□□□□ -1.64
SDF2-207ENST00000588472 TRACP01848 142 aa4.81□□□□□ -1.64
SDF2-207ENST00000588472 PPDPFLQ8WWR9 84 aa4.81□□□□□ -1.64
SDF2-207ENST00000588472 H3BT86 120 aa4.8□□□□□ -1.64
SDF2-207ENST00000588472 J3QR89 54 aa4.8□□□□□ -1.64
SDF2-207ENST00000588472 NDUFV3P56181 108 aaKnown RBP4.8□□□□□ -1.64
SDF2-207ENST00000588472 ANKRD29Q8N6D5 301 aa4.8□□□□□ -1.64
SDF2-207ENST00000588472 A0A1B0GV72 72 aa4.79□□□□□ -1.64
SDF2-207ENST00000588472 ETDBQ3ZM63 59 aa4.79□□□□□ -1.64
SDF2-207ENST00000588472 PRO0461Q9UI25 63 aa4.79□□□□□ -1.64
SDF2-207ENST00000588472 A0A1B0GX51 115 aa4.78□□□□□ -1.64
SDF2-207ENST00000588472 K7ERU9 68 aa4.78□□□□□ -1.64
SDF2-207ENST00000588472 FSIP2Q5CZC0 6907 aa4.77□□□□□ -1.65
SDF2-207ENST00000588472 BAALC-AS2P0C853 105 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms