RNA–Protein interactions for RNA: ENST00000588109.5

LIG3-210, Transcript of DNA ligase 3, humanhuman

TSL 4

Gene LIG3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-210ENST00000588109 ZNF861PO60384 105 aa3.25□□□□□ -1.89
LIG3-210ENST00000588109 FABP2P12104 132 aa3.25□□□□□ -1.89
LIG3-210ENST00000588109 CLEC2BQ92478 149 aa3.25□□□□□ -1.89
LIG3-210ENST00000588109 DHRS4-AS1Q9P1J3 65 aa3.25□□□□□ -1.89
LIG3-210ENST00000588109 hADV29S1A0JD25 119 aa3.24□□□□□ -1.89
LIG3-210ENST00000588109 H0Y9J4 135 aa3.24□□□□□ -1.89
LIG3-210ENST00000588109 DNAL4O96015 105 aa3.24□□□□□ -1.89
LIG3-210ENST00000588109 INAFM2P0DMQ5 153 aa3.24□□□□□ -1.89
LIG3-210ENST00000588109 ATXN8Q156A1 80 aa3.24□□□□□ -1.89
LIG3-210ENST00000588109 Q5VSD8 79 aa3.24□□□□□ -1.89
LIG3-210ENST00000588109 LINC00575Q6W349 94 aa3.24□□□□□ -1.89
LIG3-210ENST00000588109 SMCR5Q8TEV8 140 aa3.24□□□□□ -1.89
LIG3-210ENST00000588109 TRBV20-1A0A075B6N2 111 aa3.23□□□□□ -1.89
LIG3-210ENST00000588109 TCL1BO95988 128 aa3.23□□□□□ -1.89
LIG3-210ENST00000588109 KRTAP13-1Q8IUC0 172 aa3.23□□□□□ -1.89
LIG3-210ENST00000588109 FAM218AQ96MZ4 157 aa3.23□□□□□ -1.89
LIG3-210ENST00000588109 Q9BRP9 147 aa3.23□□□□□ -1.89
LIG3-210ENST00000588109 SPCS1Q9Y6A9 102 aa3.23□□□□□ -1.89
LIG3-210ENST00000588109 HSPG2P98160 4391 aa3.23□□□□□ -1.89
LIG3-210ENST00000588109 A0A1B0GX51 115 aa3.22□□□□□ -1.89
LIG3-210ENST00000588109 LST1O00453 97 aa3.22□□□□□ -1.89
LIG3-210ENST00000588109 ERC2-IT1O76042 136 aa3.22□□□□□ -1.89
LIG3-210ENST00000588109 Q6ZVQ6 151 aa3.22□□□□□ -1.89
LIG3-210ENST00000588109 DEFB105AQ8NG35 78 aa3.22□□□□□ -1.89
LIG3-210ENST00000588109 ZNF706Q9Y5V0 76 aaPredicted RBP3.22□□□□□ -1.89
LIG3-210ENST00000588109 FAT1Q14517 4588 aa3.21□□□□□ -1.9
LIG3-210ENST00000588109 TRACP01848 142 aa3.21□□□□□ -1.9
LIG3-210ENST00000588109 SPINK6Q6UWN8 80 aa3.21□□□□□ -1.9
LIG3-210ENST00000588109 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.21□□□□□ -1.9
LIG3-210ENST00000588109 Q6ZQY7 126 aa3.21□□□□□ -1.9
LIG3-210ENST00000588109 GTF2H5Q6ZYL4 71 aa3.21□□□□□ -1.9
LIG3-210ENST00000588109 ST20-AS1Q8NBB2 130 aa3.21□□□□□ -1.9
LIG3-210ENST00000588109 ORMDL1Q9P0S3 153 aa3.21□□□□□ -1.9
LIG3-210ENST00000588109 C9JAW5 83 aa3.2□□□□□ -1.9
LIG3-210ENST00000588109 H3BMG7 143 aa3.2□□□□□ -1.9
LIG3-210ENST00000588109 K7EP34 96 aa3.2□□□□□ -1.9
LIG3-210ENST00000588109 OXTP01178 125 aa3.2□□□□□ -1.9
LIG3-210ENST00000588109 KRTAP10-4P60372 401 aaPredicted RBP3.2□□□□□ -1.9
LIG3-210ENST00000588109 OCIAD2Q56VL3 154 aa3.2□□□□□ -1.9
LIG3-210ENST00000588109 VPS13BQ7Z7G8 4022 aa3.2□□□□□ -1.9
LIG3-210ENST00000588109 TEX49A0A1B0GTD5 131 aa3.19□□□□□ -1.9
LIG3-210ENST00000588109 A0A1B0GV90 55 aa3.19□□□□□ -1.9
LIG3-210ENST00000588109 MTURNQ8N3F0 131 aa3.19□□□□□ -1.9
LIG3-210ENST00000588109 SPRR4Q96PI1 79 aa3.19□□□□□ -1.9
LIG3-210ENST00000588109 IGLV5-48A0A075B6I7 105 aa3.18□□□□□ -1.9
LIG3-210ENST00000588109 H3BQ85 93 aa3.18□□□□□ -1.9
LIG3-210ENST00000588109 TMEM256-PLSCR3K7ERE1 68 aa3.18□□□□□ -1.9
LIG3-210ENST00000588109 BAALC-AS2P0C853 105 aa3.18□□□□□ -1.9
LIG3-210ENST00000588109 PPDPFLQ8WWR9 84 aa3.18□□□□□ -1.9
LIG3-210ENST00000588109 LAMTOR3Q9UHA4 124 aa3.18□□□□□ -1.9
LIG3-210ENST00000588109 RYR1P21817 5038 aa3.18□□□□□ -1.9
LIG3-210ENST00000588109 KIAA1109Q2LD37 5005 aa3.18□□□□□ -1.9
LIG3-210ENST00000588109 IGLV9-49A0A0B4J1Y8 123 aa3.17□□□□□ -1.9
LIG3-210ENST00000588109 A0A1B0GV72 72 aa3.17□□□□□ -1.9
LIG3-210ENST00000588109 F8WEM9 126 aa3.17□□□□□ -1.9
LIG3-210ENST00000588109 C9orf153Q5TBE3 101 aa3.17□□□□□ -1.9
LIG3-210ENST00000588109 Q8N377 158 aa3.17□□□□□ -1.9
LIG3-210ENST00000588109 C3orf22Q8N5N4 141 aa3.17□□□□□ -1.9
LIG3-210ENST00000588109 ANAPC11Q9NYG5 84 aa3.17□□□□□ -1.9
LIG3-210ENST00000588109 BIRC6Q9NR09 4857 aa3.16□□□□□ -1.9
LIG3-210ENST00000588109 H3BT86 120 aa3.16□□□□□ -1.9
LIG3-210ENST00000588109 CRYGAP11844 174 aa3.16□□□□□ -1.9
LIG3-210ENST00000588109 SPRR1BP22528 89 aa3.16□□□□□ -1.9
LIG3-210ENST00000588109 NDUFV3P56181 108 aaKnown RBP3.16□□□□□ -1.9
LIG3-210ENST00000588109 LINC01547P58512 204 aaPredicted RBP3.16□□□□□ -1.9
LIG3-210ENST00000588109 FAM229BQ4G0N7 80 aa3.16□□□□□ -1.9
LIG3-210ENST00000588109 LINC00483Q53H64 154 aa3.16□□□□□ -1.9
LIG3-210ENST00000588109 ANKRD29Q8N6D5 301 aa3.16□□□□□ -1.9
LIG3-210ENST00000588109 F8W1H4 67 aa3.15□□□□□ -1.91
LIG3-210ENST00000588109 KRTAP1-4P0C5Y4 121 aa3.15□□□□□ -1.91
LIG3-210ENST00000588109 MOBPQ13875 183 aa3.15□□□□□ -1.91
LIG3-210ENST00000588109 PKHD1L1Q86WI1 4243 aa3.14□□□□□ -1.91
LIG3-210ENST00000588109 A0A087X002 238 aa3.14□□□□□ -1.91
LIG3-210ENST00000588109 JMJD7-PLA2G4BH0Y9G9 81 aa3.14□□□□□ -1.91
LIG3-210ENST00000588109 MT3P25713 68 aa3.14□□□□□ -1.91
LIG3-210ENST00000588109 SMIM29Q86T20 159 aa3.14□□□□□ -1.91
LIG3-210ENST00000588109 TYMSOSQ8TAI1 123 aa3.14□□□□□ -1.91
LIG3-210ENST00000588109 PRO0461Q9UI25 63 aa3.14□□□□□ -1.91
LIG3-210ENST00000588109 SRRM2Q9UQ35 2752 aaKnown RBP3.13□□□□□ -1.91
LIG3-210ENST00000588109 RBM3P98179 157 aaKnown RBP3.13□□□□□ -1.91
LIG3-210ENST00000588109 CD164Q04900 197 aa3.13□□□□□ -1.91
LIG3-210ENST00000588109 Q8NBF4 154 aa3.13□□□□□ -1.91
LIG3-210ENST00000588109 DSCR8Q96T75 97 aa3.13□□□□□ -1.91
LIG3-210ENST00000588109 KRTAP13-2Q52LG2 175 aa3.12□□□□□ -1.91
LIG3-210ENST00000588109 Q6JHZ5 121 aa3.12□□□□□ -1.91
LIG3-210ENST00000588109 SSBP3-AS1Q7Z2R9 100 aa3.12□□□□□ -1.91
LIG3-210ENST00000588109 LINC01600Q96MT4 127 aa3.12□□□□□ -1.91
LIG3-210ENST00000588109 A0A0G2JQZ4 141 aa3.11□□□□□ -1.91
LIG3-210ENST00000588109 ETDBQ3ZM63 59 aa3.11□□□□□ -1.91
LIG3-210ENST00000588109 IGFL1Q6UW32 110 aa3.11□□□□□ -1.91
LIG3-210ENST00000588109 TEN1Q86WV5 123 aa3.11□□□□□ -1.91
LIG3-210ENST00000588109 VPS25Q9BRG1 176 aa3.11□□□□□ -1.91
LIG3-210ENST00000588109 C14orf132Q9NPU4 83 aa3.11□□□□□ -1.91
LIG3-210ENST00000588109 HERC2O95714 4834 aa3.1□□□□□ -1.91
LIG3-210ENST00000588109 IGLV8-61A0A075B6I0 122 aa3.1□□□□□ -1.91
LIG3-210ENST00000588109 PDE6GP18545 87 aa3.1□□□□□ -1.91
LIG3-210ENST00000588109 C4orf26Q17RF5 130 aa3.1□□□□□ -1.91
LIG3-210ENST00000588109 HRCT1Q6UXD1 115 aa3.1□□□□□ -1.91
LIG3-210ENST00000588109 LINC00304Q8N9R0 145 aa3.1□□□□□ -1.91
LIG3-210ENST00000588109 OBSCN-AS1Q96MR7 158 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms