RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 M0R143 59 aa9.02□□□□□ -0.97
NCLN-203ENST00000587740 SNCGO76070 127 aa9.02□□□□□ -0.97
NCLN-203ENST00000587740 C4orf48Q5BLP8 95 aa9.02□□□□□ -0.97
NCLN-203ENST00000587740 Q8NBF4 154 aa9.02□□□□□ -0.97
NCLN-203ENST00000587740 LINC01547P58512 204 aaPredicted RBP9.01□□□□□ -0.97
NCLN-203ENST00000587740 SPAG11AQ6PDA7 123 aa9.01□□□□□ -0.97
NCLN-203ENST00000587740 Q6ZQY7 126 aa9.01□□□□□ -0.97
NCLN-203ENST00000587740 PSMB2P49721 201 aa9□□□□□ -0.97
NCLN-203ENST00000587740 FSIP2Q5CZC0 6907 aa8.99□□□□□ -0.97
NCLN-203ENST00000587740 TRIAP1O43715 76 aa8.99□□□□□ -0.97
NCLN-203ENST00000587740 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.99□□□□□ -0.97
NCLN-203ENST00000587740 COX6CP09669 75 aa8.98□□□□□ -0.97
NCLN-203ENST00000587740 Q8N377 158 aa8.98□□□□□ -0.97
NCLN-203ENST00000587740 CDIP1Q9H305 208 aa8.98□□□□□ -0.97
NCLN-203ENST00000587740 TPRXLQ17RH7 258 aa8.97□□□□□ -0.97
NCLN-203ENST00000587740 A0A1B0GX51 115 aa8.96□□□□□ -0.98
NCLN-203ENST00000587740 LCE2DQ5TA82 110 aaPredicted RBP8.96□□□□□ -0.98
NCLN-203ENST00000587740 SMIM29Q86T20 159 aa8.96□□□□□ -0.98
NCLN-203ENST00000587740 FAM218AQ96MZ4 157 aa8.96□□□□□ -0.98
NCLN-203ENST00000587740 SPINK1P00995 79 aa8.94□□□□□ -0.98
NCLN-203ENST00000587740 OCIAD2Q56VL3 154 aa8.94□□□□□ -0.98
NCLN-203ENST00000587740 PPDPFLQ8WWR9 84 aa8.94□□□□□ -0.98
NCLN-203ENST00000587740 IGLV7-46A0A075B6I9 117 aa8.93□□□□□ -0.98
NCLN-203ENST00000587740 F8WEM9 126 aa8.93□□□□□ -0.98
NCLN-203ENST00000587740 CLEC2BQ92478 149 aa8.93□□□□□ -0.98
NCLN-203ENST00000587740 CRCT1Q9UGL9 99 aa8.92□□□□□ -0.98
NCLN-203ENST00000587740 GHRHP01286 108 aa8.91□□□□□ -0.98
NCLN-203ENST00000587740 SCGB1C2P0DMR2 95 aa8.91□□□□□ -0.98
NCLN-203ENST00000587740 SNHG12Q9BXW3 62 aa8.91□□□□□ -0.98
NCLN-203ENST00000587740 BATFQ16520 125 aa8.9□□□□□ -0.98
NCLN-203ENST00000587740 DNAL4O96015 105 aa8.89□□□□□ -0.99
NCLN-203ENST00000587740 RPS29P62273 56 aaKnown RBP8.88□□□□□ -0.99
NCLN-203ENST00000587740 HRCT1Q6UXD1 115 aa8.87□□□□□ -0.99
NCLN-203ENST00000587740 KRTAP4-1Q9BYQ7 146 aa8.86□□□□□ -0.99
NCLN-203ENST00000587740 CD164Q04900 197 aa8.85□□□□□ -0.99
NCLN-203ENST00000587740 H3BQ85 93 aa8.84□□□□□ -0.99
NCLN-203ENST00000587740 FABP2P12104 132 aa8.84□□□□□ -0.99
NCLN-203ENST00000587740 Q6JHZ5 121 aa8.84□□□□□ -0.99
NCLN-203ENST00000587740 ORMDL1Q9P0S3 153 aa8.84□□□□□ -0.99
NCLN-203ENST00000587740 IGLV8-61A0A075B6I0 122 aa8.83□□□□□ -1
NCLN-203ENST00000587740 LST1O00453 97 aa8.83□□□□□ -1
NCLN-203ENST00000587740 TRACP01848 142 aa8.83□□□□□ -1
NCLN-203ENST00000587740 NAA38Q9BRA0 125 aaKnown RBP8.83□□□□□ -1
NCLN-203ENST00000587740 LIMD2Q9BT23 127 aa8.83□□□□□ -1
NCLN-203ENST00000587740 A0A0G2JQZ4 141 aa8.82□□□□□ -1
NCLN-203ENST00000587740 NDUFV3P56181 108 aaKnown RBP8.82□□□□□ -1
NCLN-203ENST00000587740 TMEM256-PLSCR3K7ERE1 68 aa8.8□□□□□ -1
NCLN-203ENST00000587740 LYRM7Q5U5X0 104 aa8.8□□□□□ -1
NCLN-203ENST00000587740 IGFL1Q6UW32 110 aa8.8□□□□□ -1
NCLN-203ENST00000587740 H3BUT2 72 aa8.79□□□□□ -1
NCLN-203ENST00000587740 ASB16-AS1Q495Z4 193 aa8.79□□□□□ -1
NCLN-203ENST00000587740 FP248Q71RG6 208 aaPredicted RBP8.79□□□□□ -1
NCLN-203ENST00000587740 H3BMG7 143 aa8.78□□□□□ -1
NCLN-203ENST00000587740 ATXN8Q156A1 80 aa8.78□□□□□ -1
NCLN-203ENST00000587740 TCL1BO95988 128 aa8.76□□□□□ -1.01
NCLN-203ENST00000587740 KRTAP13-3Q3SY46 172 aa8.76□□□□□ -1.01
NCLN-203ENST00000587740 C9orf118A6NHY6 69 aa8.75□□□□□ -1.01
NCLN-203ENST00000587740 TAX1BP3O14907 124 aa8.75□□□□□ -1.01
NCLN-203ENST00000587740 Q5XG85 94 aa8.75□□□□□ -1.01
NCLN-203ENST00000587740 UBE2V1Q13404 147 aa8.74□□□□□ -1.01
NCLN-203ENST00000587740 TRBV20-1A0A075B6N2 111 aa8.73□□□□□ -1.01
NCLN-203ENST00000587740 BAALC-AS2P0C853 105 aa8.73□□□□□ -1.01
NCLN-203ENST00000587740 TRBV7-7A0A0K0K1E9 115 aa8.72□□□□□ -1.01
NCLN-203ENST00000587740 PCP4L1A6NKN8 68 aa8.71□□□□□ -1.02
NCLN-203ENST00000587740 LCE2CQ5TA81 110 aa8.71□□□□□ -1.02
NCLN-203ENST00000587740 A0A1B0GV72 72 aa8.7□□□□□ -1.02
NCLN-203ENST00000587740 TEN1Q86WV5 123 aa8.7□□□□□ -1.02
NCLN-203ENST00000587740 A0A1W2PPM0 123 aa8.69□□□□□ -1.02
NCLN-203ENST00000587740 COL5A1-AS1Q5SY13 56 aa8.69□□□□□ -1.02
NCLN-203ENST00000587740 ANKRD29Q8N6D5 301 aa8.69□□□□□ -1.02
NCLN-203ENST00000587740 Q6Q795 121 aa8.68□□□□□ -1.02
NCLN-203ENST00000587740 SEC61BP60468 96 aaKnown RBP8.67□□□□□ -1.02
NCLN-203ENST00000587740 C1orf195Q5TG92 126 aa8.67□□□□□ -1.02
NCLN-203ENST00000587740 RBM3P98179 157 aaKnown RBP8.66□□□□□ -1.02
NCLN-203ENST00000587740 C9JAW5 83 aa8.65□□□□□ -1.02
NCLN-203ENST00000587740 KRTAP19-2Q3LHN2 52 aa8.64□□□□□ -1.03
NCLN-203ENST00000587740 SS18L2Q9UHA2 77 aa8.64□□□□□ -1.03
NCLN-203ENST00000587740 A0A1W2PNM2 257 aa8.63□□□□□ -1.03
NCLN-203ENST00000587740 DSCR8Q96T75 97 aa8.63□□□□□ -1.03
NCLN-203ENST00000587740 A0A087WSZ3 146 aa8.62□□□□□ -1.03
NCLN-203ENST00000587740 TRBV7-4A0A0J9YYF1 115 aa8.61□□□□□ -1.03
NCLN-203ENST00000587740 JMJD7-PLA2G4BH0Y9G9 81 aa8.61□□□□□ -1.03
NCLN-203ENST00000587740 CCKP06307 115 aa8.61□□□□□ -1.03
NCLN-203ENST00000587740 SPCS1Q9Y6A9 102 aa8.61□□□□□ -1.03
NCLN-203ENST00000587740 MT1HP80294 61 aa8.6□□□□□ -1.03
NCLN-203ENST00000587740 VPS25Q9BRG1 176 aa8.59□□□□□ -1.03
NCLN-203ENST00000587740 XP32Q5T750 250 aa8.58□□□□□ -1.04
NCLN-203ENST00000587740 H3BT86 120 aa8.57□□□□□ -1.04
NCLN-203ENST00000587740 C9orf92A6NGG3 77 aa8.55□□□□□ -1.04
NCLN-203ENST00000587740 MTURNQ8N3F0 131 aa8.55□□□□□ -1.04
NCLN-203ENST00000587740 PDE6GP18545 87 aa8.53□□□□□ -1.04
NCLN-203ENST00000587740 LORP23490 312 aaPredicted RBP8.53□□□□□ -1.04
NCLN-203ENST00000587740 LOC110117498A0A087WWA1 95 aa8.52□□□□□ -1.05
NCLN-203ENST00000587740 Q6ZQT0 140 aa8.52□□□□□ -1.05
NCLN-203ENST00000587740 K7EP34 96 aa8.51□□□□□ -1.05
NCLN-203ENST00000587740 C21orf62-AS1Q17RA5 79 aa8.51□□□□□ -1.05
NCLN-203ENST00000587740 OBSCN-AS1Q96MR7 158 aa8.51□□□□□ -1.05
NCLN-203ENST00000587740 C14orf132Q9NPU4 83 aa8.51□□□□□ -1.05
NCLN-203ENST00000587740 KRTAP10-6P60371 365 aaPredicted RBP8.5□□□□□ -1.05
NCLN-203ENST00000587740 Q96NJ1 140 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms