RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 SPRR1BP22528 89 aa11.7□□□□□ -0.54
DDX39A-206ENST00000587730 LINC00474Q9P2X8 69 aa11.7□□□□□ -0.54
DDX39A-206ENST00000587730 UBE2AP49459 152 aa11.69□□□□□ -0.54
DDX39A-206ENST00000587730 LINC00336Q6ZUF6 198 aa11.69□□□□□ -0.54
DDX39A-206ENST00000587730 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.67□□□□□ -0.54
DDX39A-206ENST00000587730 MP68P56378 58 aa11.67□□□□□ -0.54
DDX39A-206ENST00000587730 TENM3Q9P273 2699 aa11.67□□□□□ -0.54
DDX39A-206ENST00000587730 PRLHP81277 87 aa11.67□□□□□ -0.54
DDX39A-206ENST00000587730 A0A087WSZ3 146 aa11.66□□□□□ -0.54
DDX39A-206ENST00000587730 IGKV2-24A0A0C4DH68 120 aa11.66□□□□□ -0.54
DDX39A-206ENST00000587730 hDV103S1A0JD37 113 aa11.66□□□□□ -0.54
DDX39A-206ENST00000587730 H3BPC8 53 aa11.66□□□□□ -0.54
DDX39A-206ENST00000587730 CYP4F30PQ9H0H9 118 aa11.66□□□□□ -0.54
DDX39A-206ENST00000587730 A0A1W2PNN7 141 aa11.65□□□□□ -0.54
DDX39A-206ENST00000587730 K7EIL1 84 aa11.65□□□□□ -0.54
DDX39A-206ENST00000587730 TGP01266 2768 aa11.62□□□□□ -0.55
DDX39A-206ENST00000587730 FAM229BQ4G0N7 80 aa11.62□□□□□ -0.55
DDX39A-206ENST00000587730 UBE2DNLQ8IWF7 75 aa11.62□□□□□ -0.55
DDX39A-206ENST00000587730 DNAH1Q9P2D7 4330 aa11.61□□□□□ -0.55
DDX39A-206ENST00000587730 B9D2Q9BPU9 175 aa11.6□□□□□ -0.55
DDX39A-206ENST00000587730 KRTAP1-5Q9BYS1 174 aa11.59□□□□□ -0.55
DDX39A-206ENST00000587730 PRKDCP78527 4128 aaKnown RBP11.59□□□□□ -0.55
DDX39A-206ENST00000587730 KRTAP29-1A8MX34 341 aaPredicted RBP11.58□□□□□ -0.56
DDX39A-206ENST00000587730 A8MWP4 228 aa11.58□□□□□ -0.56
DDX39A-206ENST00000587730 PRR15Q8IV56 129 aa11.58□□□□□ -0.56
DDX39A-206ENST00000587730 MPLKIPQ8TAP9 179 aa11.58□□□□□ -0.56
DDX39A-206ENST00000587730 Q1T7F1 81 aa11.57□□□□□ -0.56
DDX39A-206ENST00000587730 C1orf64Q8NEQ6 169 aa11.57□□□□□ -0.56
DDX39A-206ENST00000587730 WFDC13Q8IUB5 93 aa11.56□□□□□ -0.56
DDX39A-206ENST00000587730 CASC2Q6XLA1 102 aa11.56□□□□□ -0.56
DDX39A-206ENST00000587730 C9orf163Q8N9P6 203 aa11.56□□□□□ -0.56
DDX39A-206ENST00000587730 TRAV22A0A0B4J277 110 aa11.54□□□□□ -0.56
DDX39A-206ENST00000587730 SPANXA2-OT1Q8N9U9 137 aa11.54□□□□□ -0.56
DDX39A-206ENST00000587730 APLNQ9ULZ1 77 aa11.54□□□□□ -0.56
DDX39A-206ENST00000587730 PHF5AQ7RTV0 110 aaKnown RBP11.53□□□□□ -0.56
DDX39A-206ENST00000587730 LINC00472Q9H8W2 130 aa11.53□□□□□ -0.56
DDX39A-206ENST00000587730 A0A0G2JQZ4 141 aa11.53□□□□□ -0.56
DDX39A-206ENST00000587730 DEFB116Q30KQ4 102 aa11.52□□□□□ -0.57
DDX39A-206ENST00000587730 V9GYY9 64 aa11.52□□□□□ -0.57
DDX39A-206ENST00000587730 BRK1Q8WUW1 75 aa11.51□□□□□ -0.57
DDX39A-206ENST00000587730 DNAH9Q9NYC9 4486 aa11.5□□□□□ -0.57
DDX39A-206ENST00000587730 RPL37AP61513 92 aaKnown RBP11.49□□□□□ -0.57
DDX39A-206ENST00000587730 H0Y9P7 68 aa11.48□□□□□ -0.57
DDX39A-206ENST00000587730 LINC00208Q96KT6 92 aa11.48□□□□□ -0.57
DDX39A-206ENST00000587730 HUWE1Q7Z6Z7 4374 aaKnown RBP11.47□□□□□ -0.57
DDX39A-206ENST00000587730 CHTF8P0CG12 524 aa11.47□□□□□ -0.57
DDX39A-206ENST00000587730 C4orf48Q5BLP8 95 aa11.46□□□□□ -0.57
DDX39A-206ENST00000587730 COL7A1Q02388 2944 aa11.46□□□□□ -0.58
DDX39A-206ENST00000587730 LRCOL1A6NCL2 159 aa11.45□□□□□ -0.58
DDX39A-206ENST00000587730 KRTAP13-1Q8IUC0 172 aa11.45□□□□□ -0.58
DDX39A-206ENST00000587730 KRTAP11-1Q8IUC1 163 aa11.45□□□□□ -0.58
DDX39A-206ENST00000587730 NBDYA0A0U1RRE5 68 aa11.42□□□□□ -0.58
DDX39A-206ENST00000587730 TP53AIP1Q9HCN2 124 aa11.41□□□□□ -0.58
DDX39A-206ENST00000587730 ZNF706Q9Y5V0 76 aaPredicted RBP11.4□□□□□ -0.58
DDX39A-206ENST00000587730 NUPR2A6NF83 97 aa11.39□□□□□ -0.59
DDX39A-206ENST00000587730 MOBPQ13875 183 aa11.39□□□□□ -0.59
DDX39A-206ENST00000587730 MMP24-AS1A0A0U1RRL7 71 aa11.38□□□□□ -0.59
DDX39A-206ENST00000587730 LINC00483Q53H64 154 aa11.37□□□□□ -0.59
DDX39A-206ENST00000587730 C1orf195Q5TG92 126 aa11.36□□□□□ -0.59
DDX39A-206ENST00000587730 PRR4Q16378 134 aa11.35□□□□□ -0.59
DDX39A-206ENST00000587730 Q6ZRN7 208 aaPredicted RBP11.35□□□□□ -0.59
DDX39A-206ENST00000587730 SPACA4Q8TDM5 124 aa11.35□□□□□ -0.59
DDX39A-206ENST00000587730 ASB16-AS1Q495Z4 193 aa11.33□□□□□ -0.6
DDX39A-206ENST00000587730 STAB2Q8WWQ8 2551 aa11.33□□□□□ -0.6
DDX39A-206ENST00000587730 LIMD2Q9BT23 127 aa11.31□□□□□ -0.6
DDX39A-206ENST00000587730 IGLV7-46A0A075B6I9 117 aa11.28□□□□□ -0.6
DDX39A-206ENST00000587730 Q96NJ1 140 aa11.28□□□□□ -0.6
DDX39A-206ENST00000587730 IGLV9-49A0A0B4J1Y8 123 aa11.26□□□□□ -0.61
DDX39A-206ENST00000587730 CDK2AP2O75956 126 aa11.26□□□□□ -0.61
DDX39A-206ENST00000587730 C8orf17Q9NRJ1 99 aa11.26□□□□□ -0.61
DDX39A-206ENST00000587730 DNAH7Q8WXX0 4024 aa11.26□□□□□ -0.61
DDX39A-206ENST00000587730 PANO1I0J062 215 aa11.25□□□□□ -0.61
DDX39A-206ENST00000587730 PSPHP1O15172 72 aa11.25□□□□□ -0.61
DDX39A-206ENST00000587730 Q6ZR54 194 aa11.25□□□□□ -0.61
DDX39A-206ENST00000587730 A0A1B0GVX0 72 aa11.23□□□□□ -0.61
DDX39A-206ENST00000587730 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.23□□□□□ -0.61
DDX39A-206ENST00000587730 A0A087WTM6 91 aa11.21□□□□□ -0.61
DDX39A-206ENST00000587730 IGLV5-52A0A0A0MRZ9 124 aa11.21□□□□□ -0.62
DDX39A-206ENST00000587730 Q8N9P0 234 aaPredicted RBP11.21□□□□□ -0.62
DDX39A-206ENST00000587730 WWC2-AS2Q96NR7 200 aa11.21□□□□□ -0.62
DDX39A-206ENST00000587730 CSMD3Q7Z407 3707 aa11.21□□□□□ -0.62
DDX39A-206ENST00000587730 DYNC2H1Q8NCM8 4307 aaKnown RBP11.2□□□□□ -0.62
DDX39A-206ENST00000587730 A8MUN3 132 aa11.19□□□□□ -0.62
DDX39A-206ENST00000587730 ZNF861PO60384 105 aa11.18□□□□□ -0.62
DDX39A-206ENST00000587730 PLAC8Q9NZF1 115 aa11.18□□□□□ -0.62
DDX39A-206ENST00000587730 DNAH10Q8IVF4 4471 aa11.18□□□□□ -0.62
DDX39A-206ENST00000587730 COA5Q86WW8 74 aa11.17□□□□□ -0.62
DDX39A-206ENST00000587730 MRPL34Q9BQ48 92 aaKnown RBP11.16□□□□□ -0.62
DDX39A-206ENST00000587730 Q5VV11 94 aa11.16□□□□□ -0.62
DDX39A-206ENST00000587730 RTL8CO15255 209 aa11.15□□□□□ -0.62
DDX39A-206ENST00000587730 PSORS1C2Q9UIG4 136 aa11.15□□□□□ -0.62
DDX39A-206ENST00000587730 IGHV6-1A0A0B4J1U7 121 aa11.14□□□□□ -0.63
DDX39A-206ENST00000587730 STARD9Q9P2P6 4700 aa11.13□□□□□ -0.63
DDX39A-206ENST00000587730 LOC101927531A0A1B0GV80 90 aa11.12□□□□□ -0.63
DDX39A-206ENST00000587730 NDUFS5O43920 106 aa11.12□□□□□ -0.63
DDX39A-206ENST00000587730 CD164Q04900 197 aa11.1□□□□□ -0.63
DDX39A-206ENST00000587730 Q75L30 129 aa11.1□□□□□ -0.63
DDX39A-206ENST00000587730 LYSTQ99698 3801 aa11.09□□□□□ -0.63
DDX39A-206ENST00000587730 PRR15LQ9BU68 103 aa11.09□□□□□ -0.63
DDX39A-206ENST00000587730 CHKB-CPT1BH3BT56 60 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms