RNA–Protein interactions for RNA: ENST00000587502.2

LSM7-204, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM7, Length 575 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-204ENST00000587502 H7C2G1 150 aa13.09□□□□□ -0.31
LSM7-204ENST00000587502 BVES-AS1Q5T3Y7 98 aa13.08□□□□□ -0.32
LSM7-204ENST00000587502 LIMD2Q9BT23 127 aa13.07□□□□□ -0.32
LSM7-204ENST00000587502 PRO1933Q9H354 126 aa13.06□□□□□ -0.32
LSM7-204ENST00000587502 PRO1854Q9UHT4 67 aa13.06□□□□□ -0.32
LSM7-204ENST00000587502 hADV29S1A0JD25 119 aa13.05□□□□□ -0.32
LSM7-204ENST00000587502 SMIM29Q86T20 159 aa13.05□□□□□ -0.32
LSM7-204ENST00000587502 Q1RN00 199 aa13.02□□□□□ -0.33
LSM7-204ENST00000587502 CD164Q04900 197 aa13.01□□□□□ -0.33
LSM7-204ENST00000587502 ASB16-AS1Q495Z4 193 aa13□□□□□ -0.33
LSM7-204ENST00000587502 Q6ZQY7 126 aa13□□□□□ -0.33
LSM7-204ENST00000587502 SEC61BP60468 96 aaKnown RBP12.99□□□□□ -0.33
LSM7-204ENST00000587502 HRCT1Q6UXD1 115 aa12.99□□□□□ -0.33
LSM7-204ENST00000587502 H0YGX0 51 aa12.98□□□□□ -0.33
LSM7-204ENST00000587502 K7ERJ3 54 aa12.96□□□□□ -0.33
LSM7-204ENST00000587502 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.96□□□□□ -0.33
LSM7-204ENST00000587502 TSTD3H0UI37 97 aa12.94□□□□□ -0.34
LSM7-204ENST00000587502 FAM218AQ96MZ4 157 aa12.94□□□□□ -0.34
LSM7-204ENST00000587502 FAT4Q6V0I7 4981 aa12.94□□□□□ -0.34
LSM7-204ENST00000587502 TRIAP1O43715 76 aa12.92□□□□□ -0.34
LSM7-204ENST00000587502 XP32Q5T750 250 aa12.91□□□□□ -0.34
LSM7-204ENST00000587502 Q5XG85 94 aa12.89□□□□□ -0.35
LSM7-204ENST00000587502 PPDPFLQ8WWR9 84 aa12.88□□□□□ -0.35
LSM7-204ENST00000587502 M0R143 59 aa12.87□□□□□ -0.35
LSM7-204ENST00000587502 SNCGO76070 127 aa12.87□□□□□ -0.35
LSM7-204ENST00000587502 A0A0G2JQZ4 141 aa12.86□□□□□ -0.35
LSM7-204ENST00000587502 A0A1B0GX51 115 aa12.86□□□□□ -0.35
LSM7-204ENST00000587502 LCE2AQ5TA79 106 aaPredicted RBP12.86□□□□□ -0.35
LSM7-204ENST00000587502 F8WEM9 126 aa12.85□□□□□ -0.35
LSM7-204ENST00000587502 PSMB2P49721 201 aa12.84□□□□□ -0.35
LSM7-204ENST00000587502 OCIAD2Q56VL3 154 aa12.84□□□□□ -0.35
LSM7-204ENST00000587502 IGLV8-61A0A075B6I0 122 aa12.82□□□□□ -0.36
LSM7-204ENST00000587502 CLEC2BQ92478 149 aa12.82□□□□□ -0.36
LSM7-204ENST00000587502 SNHG12Q9BXW3 62 aa12.81□□□□□ -0.36
LSM7-204ENST00000587502 COX6CP09669 75 aa12.8□□□□□ -0.36
LSM7-204ENST00000587502 TCL1BO95988 128 aa12.78□□□□□ -0.36
LSM7-204ENST00000587502 C1orf195Q5TG92 126 aa12.77□□□□□ -0.37
LSM7-204ENST00000587502 Q6JHZ5 121 aa12.77□□□□□ -0.37
LSM7-204ENST00000587502 C9orf92A6NGG3 77 aa12.75□□□□□ -0.37
LSM7-204ENST00000587502 IGFL1Q6UW32 110 aa12.75□□□□□ -0.37
LSM7-204ENST00000587502 KRTAP4-1Q9BYQ7 146 aa12.74□□□□□ -0.37
LSM7-204ENST00000587502 GHRHP01286 108 aa12.73□□□□□ -0.37
LSM7-204ENST00000587502 NDUFV3P56181 108 aaKnown RBP12.73□□□□□ -0.37
LSM7-204ENST00000587502 H3BUT2 72 aa12.71□□□□□ -0.37
LSM7-204ENST00000587502 DNAL4O96015 105 aa12.7□□□□□ -0.38
LSM7-204ENST00000587502 SCGB1C2P0DMR2 95 aa12.7□□□□□ -0.38
LSM7-204ENST00000587502 FABP2P12104 132 aa12.69□□□□□ -0.38
LSM7-204ENST00000587502 ORMDL1Q9P0S3 153 aa12.68□□□□□ -0.38
LSM7-204ENST00000587502 BATFQ16520 125 aa12.67□□□□□ -0.38
LSM7-204ENST00000587502 LST1O00453 97 aa12.66□□□□□ -0.38
LSM7-204ENST00000587502 TRACP01848 142 aa12.66□□□□□ -0.38
LSM7-204ENST00000587502 PCOTHQ58A44 107 aa12.65□□□□□ -0.38
LSM7-204ENST00000587502 TRBV7-7A0A0K0K1E9 115 aa12.64□□□□□ -0.39
LSM7-204ENST00000587502 H3BMG7 143 aa12.64□□□□□ -0.39
LSM7-204ENST00000587502 H3BQ85 93 aa12.64□□□□□ -0.39
LSM7-204ENST00000587502 NAA38Q9BRA0 125 aaKnown RBP12.63□□□□□ -0.39
LSM7-204ENST00000587502 TMEM256-PLSCR3K7ERE1 68 aa12.62□□□□□ -0.39
LSM7-204ENST00000587502 Q6Q795 121 aa12.59□□□□□ -0.39
LSM7-204ENST00000587502 UBE2V1Q13404 147 aa12.56□□□□□ -0.4
LSM7-204ENST00000587502 TEN1Q86WV5 123 aa12.56□□□□□ -0.4
LSM7-204ENST00000587502 RPL37P61927 97 aaKnown RBP12.54□□□□□ -0.4
LSM7-204ENST00000587502 LYRM7Q5U5X0 104 aa12.53□□□□□ -0.4
LSM7-204ENST00000587502 ATXN8Q156A1 80 aa12.52□□□□□ -0.41
LSM7-204ENST00000587502 C9orf118A6NHY6 69 aa12.51□□□□□ -0.41
LSM7-204ENST00000587502 BAALC-AS2P0C853 105 aa12.51□□□□□ -0.41
LSM7-204ENST00000587502 A0A1B0GV72 72 aa12.5□□□□□ -0.41
LSM7-204ENST00000587502 A0A1W2PNM2 257 aa12.5□□□□□ -0.41
LSM7-204ENST00000587502 TAX1BP3O14907 124 aa12.5□□□□□ -0.41
LSM7-204ENST00000587502 ANKRD29Q8N6D5 301 aa12.5□□□□□ -0.41
LSM7-204ENST00000587502 CRCT1Q9UGL9 99 aa12.49□□□□□ -0.41
LSM7-204ENST00000587502 SS18L2Q9UHA2 77 aa12.49□□□□□ -0.41
LSM7-204ENST00000587502 FSIP2Q5CZC0 6907 aa12.47□□□□□ -0.41
LSM7-204ENST00000587502 TRBV20-1A0A075B6N2 111 aa12.47□□□□□ -0.41
LSM7-204ENST00000587502 A0A087WSZ3 146 aa12.45□□□□□ -0.42
LSM7-204ENST00000587502 PCP4L1A6NKN8 68 aa12.44□□□□□ -0.42
LSM7-204ENST00000587502 LCE2CQ5TA81 110 aa12.44□□□□□ -0.42
LSM7-204ENST00000587502 TRBV7-4A0A0J9YYF1 115 aa12.43□□□□□ -0.42
LSM7-204ENST00000587502 COL5A1-AS1Q5SY13 56 aa12.43□□□□□ -0.42
LSM7-204ENST00000587502 RBM3P98179 157 aaKnown RBP12.42□□□□□ -0.42
LSM7-204ENST00000587502 A0A1W2PPM0 123 aa12.41□□□□□ -0.42
LSM7-204ENST00000587502 KRTAP19-2Q3LHN2 52 aa12.41□□□□□ -0.42
LSM7-204ENST00000587502 LCE2DQ5TA82 110 aaPredicted RBP12.41□□□□□ -0.42
LSM7-204ENST00000587502 OBSCN-AS1Q96MR7 158 aa12.4□□□□□ -0.42
LSM7-204ENST00000587502 CCKP06307 115 aa12.38□□□□□ -0.43
LSM7-204ENST00000587502 Q75L30 129 aa12.37□□□□□ -0.43
LSM7-204ENST00000587502 DSCR8Q96T75 97 aa12.37□□□□□ -0.43
LSM7-204ENST00000587502 Q96NJ1 140 aa12.36□□□□□ -0.43
LSM7-204ENST00000587502 C9JAW5 83 aa12.35□□□□□ -0.43
LSM7-204ENST00000587502 ATP11AUNQ6ZP68 121 aa12.35□□□□□ -0.43
LSM7-204ENST00000587502 JMJD7-PLA2G4BH0Y9G9 81 aa12.31□□□□□ -0.44
LSM7-204ENST00000587502 MT1HP80294 61 aa12.31□□□□□ -0.44
LSM7-204ENST00000587502 VPS25Q9BRG1 176 aa12.3□□□□□ -0.44
LSM7-204ENST00000587502 SPCS1Q9Y6A9 102 aa12.28□□□□□ -0.44
LSM7-204ENST00000587502 COX6B2Q6YFQ2 88 aa12.27□□□□□ -0.45
LSM7-204ENST00000587502 LOC110117498A0A087WWA1 95 aa12.25□□□□□ -0.45
LSM7-204ENST00000587502 Q6ZQT0 140 aa12.25□□□□□ -0.45
LSM7-204ENST00000587502 LINC00472Q9H8W2 130 aa12.25□□□□□ -0.45
LSM7-204ENST00000587502 H3BT86 120 aa12.24□□□□□ -0.45
LSM7-204ENST00000587502 C20orf166-AS1Q96NR2 134 aa12.23□□□□□ -0.45
LSM7-204ENST00000587502 MTURNQ8N3F0 131 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms