RNA–Protein interactions for RNA: ENST00000587411.5

RANBP3-209, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 2,669 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-209ENST00000587411 CASC2Q6XLA1 102 aa10.34□□□□□ -0.75
RANBP3-209ENST00000587411 A8MUN3 132 aa10.34□□□□□ -0.75
RANBP3-209ENST00000587411 PRLHP81277 87 aa10.33□□□□□ -0.76
RANBP3-209ENST00000587411 UBE2AP49459 152 aa10.32□□□□□ -0.76
RANBP3-209ENST00000587411 RPL37AP61513 92 aaKnown RBP10.32□□□□□ -0.76
RANBP3-209ENST00000587411 LIMD2Q9BT23 127 aa10.3□□□□□ -0.76
RANBP3-209ENST00000587411 FLNBO75369 2602 aaKnown RBP10.3□□□□□ -0.76
RANBP3-209ENST00000587411 A8MWP4 228 aa10.3□□□□□ -0.76
RANBP3-209ENST00000587411 Q5VV11 94 aa10.3□□□□□ -0.76
RANBP3-209ENST00000587411 NSD1Q96L73 2696 aaPredicted RBP10.3□□□□□ -0.76
RANBP3-209ENST00000587411 C16orf90A8MZG2 172 aa10.3□□□□□ -0.76
RANBP3-209ENST00000587411 CNBPP62633 177 aaKnown RBP10.3□□□□□ -0.76
RANBP3-209ENST00000587411 PRB2P02812 416 aaPredicted RBP10.29□□□□□ -0.76
RANBP3-209ENST00000587411 SPRR1BP22528 89 aa10.28□□□□□ -0.76
RANBP3-209ENST00000587411 A0A096LNI7 61 aa10.27□□□□□ -0.77
RANBP3-209ENST00000587411 Q8N9P0 234 aaPredicted RBP10.27□□□□□ -0.77
RANBP3-209ENST00000587411 C9orf163Q8N9P6 203 aa10.27□□□□□ -0.77
RANBP3-209ENST00000587411 LINC00472Q9H8W2 130 aa10.27□□□□□ -0.77
RANBP3-209ENST00000587411 ATRQ13535 2644 aa10.25□□□□□ -0.77
RANBP3-209ENST00000587411 TEP1Q99973 2627 aaKnown RBP10.25□□□□□ -0.77
RANBP3-209ENST00000587411 PKD1L1Q8TDX9 2849 aa10.25□□□□□ -0.77
RANBP3-209ENST00000587411 TRRAPQ9Y4A5 3859 aa10.25□□□□□ -0.77
RANBP3-209ENST00000587411 IGKV2-24A0A0C4DH68 120 aa10.24□□□□□ -0.77
RANBP3-209ENST00000587411 H0Y9J4 135 aa10.24□□□□□ -0.77
RANBP3-209ENST00000587411 DNAH1Q9P2D7 4330 aa10.22□□□□□ -0.77
RANBP3-209ENST00000587411 CHKB-CPT1BH3BT56 60 aa10.21□□□□□ -0.77
RANBP3-209ENST00000587411 PRR15LQ9BU68 103 aa10.2□□□□□ -0.78
RANBP3-209ENST00000587411 F8P00451 2351 aa10.19□□□□□ -0.78
RANBP3-209ENST00000587411 IGLV7-46A0A075B6I9 117 aa10.19□□□□□ -0.78
RANBP3-209ENST00000587411 MMP24-AS1A0A0U1RRL7 71 aa10.18□□□□□ -0.78
RANBP3-209ENST00000587411 TENM3Q9P273 2699 aa10.18□□□□□ -0.78
RANBP3-209ENST00000587411 COA5Q86WW8 74 aa10.17□□□□□ -0.78
RANBP3-209ENST00000587411 Q75L30 129 aa10.16□□□□□ -0.78
RANBP3-209ENST00000587411 LOC101927531A0A1B0GV80 90 aa10.15□□□□□ -0.78
RANBP3-209ENST00000587411 PHF5AQ7RTV0 110 aaKnown RBP10.14□□□□□ -0.79
RANBP3-209ENST00000587411 A8MU10 97 aa10.14□□□□□ -0.79
RANBP3-209ENST00000587411 TP53AIP1Q9HCN2 124 aa10.13□□□□□ -0.79
RANBP3-209ENST00000587411 KRTAP11-1Q8IUC1 163 aa10.13□□□□□ -0.79
RANBP3-209ENST00000587411 C14orf177Q52M58 125 aa10.11□□□□□ -0.79
RANBP3-209ENST00000587411 C4orf48Q5BLP8 95 aa10.11□□□□□ -0.79
RANBP3-209ENST00000587411 MOBPQ13875 183 aa10.1□□□□□ -0.79
RANBP3-209ENST00000587411 ASB16-AS1Q495Z4 193 aa10.1□□□□□ -0.79
RANBP3-209ENST00000587411 ATP11AUNQ6ZP68 121 aa10.1□□□□□ -0.79
RANBP3-209ENST00000587411 CD164Q04900 197 aa10.09□□□□□ -0.79
RANBP3-209ENST00000587411 KRTAP1-5Q9BYS1 174 aa10.09□□□□□ -0.79
RANBP3-209ENST00000587411 A6NED7 52 aa10.08□□□□□ -0.8
RANBP3-209ENST00000587411 CHTF8P0CG12 524 aa10.08□□□□□ -0.8
RANBP3-209ENST00000587411 Q6ZR54 194 aa10.06□□□□□ -0.8
RANBP3-209ENST00000587411 LCA10Q71F78 164 aa10.06□□□□□ -0.8
RANBP3-209ENST00000587411 KTN1-AS1Q86SY8 53 aa10.05□□□□□ -0.8
RANBP3-209ENST00000587411 ANK2Q01484 3957 aa10.05□□□□□ -0.8
RANBP3-209ENST00000587411 PCOTHQ58A44 107 aa10.05□□□□□ -0.8
RANBP3-209ENST00000587411 Q96NJ1 140 aa10.04□□□□□ -0.8
RANBP3-209ENST00000587411 LINC01558Q9Y6Z2 57 aa10.04□□□□□ -0.8
RANBP3-209ENST00000587411 SPTSSBQ8NFR3 76 aa10.03□□□□□ -0.8
RANBP3-209ENST00000587411 KRTAP13-1Q8IUC0 172 aa10.03□□□□□ -0.8
RANBP3-209ENST00000587411 C8orf17Q9NRJ1 99 aa10.03□□□□□ -0.8
RANBP3-209ENST00000587411 CDC42SE1Q9NRR8 79 aa10.02□□□□□ -0.8
RANBP3-209ENST00000587411 BAHCC1Q9P281 2608 aa10.02□□□□□ -0.81
RANBP3-209ENST00000587411 PLAC8Q9NZF1 115 aa10.01□□□□□ -0.81
RANBP3-209ENST00000587411 KRTAP24-1Q3LI83 254 aa10.01□□□□□ -0.81
RANBP3-209ENST00000587411 NDUFS5O43920 106 aa9.98□□□□□ -0.81
RANBP3-209ENST00000587411 DNAH3Q8TD57 4116 aa9.98□□□□□ -0.81
RANBP3-209ENST00000587411 STAB1Q9NY15 2570 aa9.97□□□□□ -0.81
RANBP3-209ENST00000587411 UBE2DNLQ8IWF7 75 aa9.97□□□□□ -0.81
RANBP3-209ENST00000587411 A0A1B0GVX0 72 aa9.97□□□□□ -0.81
RANBP3-209ENST00000587411 SPAG11AQ6PDA7 123 aa9.97□□□□□ -0.81
RANBP3-209ENST00000587411 A6NN06 94 aa9.96□□□□□ -0.81
RANBP3-209ENST00000587411 IGLV9-49A0A0B4J1Y8 123 aa9.96□□□□□ -0.82
RANBP3-209ENST00000587411 MAST4O15021 2626 aa9.95□□□□□ -0.82
RANBP3-209ENST00000587411 LINC00483Q53H64 154 aa9.94□□□□□ -0.82
RANBP3-209ENST00000587411 FBN1P35555 2871 aaKnown RBP9.94□□□□□ -0.82
RANBP3-209ENST00000587411 CDK2AP2O75956 126 aa9.94□□□□□ -0.82
RANBP3-209ENST00000587411 CMYA5Q8N3K9 4069 aa9.93□□□□□ -0.82
RANBP3-209ENST00000587411 MRPL34Q9BQ48 92 aaKnown RBP9.93□□□□□ -0.82
RANBP3-209ENST00000587411 IGHV6-1A0A0B4J1U7 121 aa9.93□□□□□ -0.82
RANBP3-209ENST00000587411 HRES1P13985 223 aa9.93□□□□□ -0.82
RANBP3-209ENST00000587411 K7EIL1 84 aa9.92□□□□□ -0.82
RANBP3-209ENST00000587411 ZNF706Q9Y5V0 76 aaPredicted RBP9.9□□□□□ -0.82
RANBP3-209ENST00000587411 DNAH10Q8IVF4 4471 aa9.9□□□□□ -0.83
RANBP3-209ENST00000587411 PANO1I0J062 215 aa9.89□□□□□ -0.83
RANBP3-209ENST00000587411 APLNQ9ULZ1 77 aa9.89□□□□□ -0.83
RANBP3-209ENST00000587411 HUWE1Q7Z6Z7 4374 aaKnown RBP9.88□□□□□ -0.83
RANBP3-209ENST00000587411 SRRM2Q9UQ35 2752 aaKnown RBP9.88□□□□□ -0.83
RANBP3-209ENST00000587411 RBM12B-AS1Q9P1G2 102 aa9.87□□□□□ -0.83
RANBP3-209ENST00000587411 COL6A5A8TX70 2615 aa9.86□□□□□ -0.83
RANBP3-209ENST00000587411 C7orf65Q6ZTY9 151 aa9.84□□□□□ -0.83
RANBP3-209ENST00000587411 SPACA4Q8TDM5 124 aa9.84□□□□□ -0.83
RANBP3-209ENST00000587411 WWC2-AS2Q96NR7 200 aa9.84□□□□□ -0.83
RANBP3-209ENST00000587411 SPINK7P58062 85 aa9.84□□□□□ -0.83
RANBP3-209ENST00000587411 TENM2Q9NT68 2774 aa9.82□□□□□ -0.84
RANBP3-209ENST00000587411 NOTCH1P46531 2555 aa9.82□□□□□ -0.84
RANBP3-209ENST00000587411 NBDYA0A0U1RRE5 68 aa9.8□□□□□ -0.84
RANBP3-209ENST00000587411 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.8□□□□□ -0.84
RANBP3-209ENST00000587411 DNAH9Q9NYC9 4486 aa9.8□□□□□ -0.84
RANBP3-209ENST00000587411 A0A087X002 238 aa9.79□□□□□ -0.84
RANBP3-209ENST00000587411 NOTCH2NLQ7Z3S9 236 aa9.79□□□□□ -0.84
RANBP3-209ENST00000587411 Q6ZRN7 208 aaPredicted RBP9.79□□□□□ -0.84
RANBP3-209ENST00000587411 MDFIQ99750 246 aa9.79□□□□□ -0.84
RANBP3-209ENST00000587411 KRTAP13-3Q3SY46 172 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms