RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 FCGBPQ9Y6R7 5405 aaPredicted RBP6.12□□□□□ -1.43
BRCA1-225ENST00000586385 TSTD3H0UI37 97 aa6.12□□□□□ -1.43
BRCA1-225ENST00000586385 LINC00518Q8N0U6 118 aa6.12□□□□□ -1.43
BRCA1-225ENST00000586385 ZNF815PA8K554 130 aa6.11□□□□□ -1.43
BRCA1-225ENST00000586385 A0A1B0GWB2 263 aa6.1□□□□□ -1.43
BRCA1-225ENST00000586385 Q75L30 129 aa6.1□□□□□ -1.43
BRCA1-225ENST00000586385 TCL1BO95988 128 aa6.09□□□□□ -1.43
BRCA1-225ENST00000586385 CFC1P0CG37 223 aa6.09□□□□□ -1.43
BRCA1-225ENST00000586385 PYY3Q5JQD4 70 aa6.09□□□□□ -1.43
BRCA1-225ENST00000586385 C12orf57Q99622 126 aa6.09□□□□□ -1.43
BRCA1-225ENST00000586385 OBSCN-AS1Q96MR7 158 aa6.08□□□□□ -1.44
BRCA1-225ENST00000586385 LCE2BO14633 110 aa6.06□□□□□ -1.44
BRCA1-225ENST00000586385 MT2AP02795 61 aa6.06□□□□□ -1.44
BRCA1-225ENST00000586385 PCP2Q8IVA1 136 aa6.06□□□□□ -1.44
BRCA1-225ENST00000586385 COPS9Q8WXC6 57 aa6.06□□□□□ -1.44
BRCA1-225ENST00000586385 TRBV7-7A0A0K0K1E9 115 aa6.05□□□□□ -1.44
BRCA1-225ENST00000586385 ATP11AUNQ6ZP68 121 aa6.05□□□□□ -1.44
BRCA1-225ENST00000586385 KRTAP19-1Q8IUB9 90 aa6.05□□□□□ -1.44
BRCA1-225ENST00000586385 UQCR10Q9UDW1 63 aa6.05□□□□□ -1.44
BRCA1-225ENST00000586385 A6NDN8 102 aa6.04□□□□□ -1.44
BRCA1-225ENST00000586385 DLEU1O43261 78 aa6.04□□□□□ -1.44
BRCA1-225ENST00000586385 SPATA45Q537H7 98 aa6.04□□□□□ -1.44
BRCA1-225ENST00000586385 SMIM11BQ8TCY0 68 aa6.04□□□□□ -1.44
BRCA1-225ENST00000586385 IGFL1Q6UW32 110 aa6.03□□□□□ -1.44
BRCA1-225ENST00000586385 PAM16Q9Y3D7 125 aa6.03□□□□□ -1.44
BRCA1-225ENST00000586385 A4D1N5 150 aa6.02□□□□□ -1.45
BRCA1-225ENST00000586385 MT1FP04733 61 aa6.02□□□□□ -1.45
BRCA1-225ENST00000586385 MUSTN1Q8IVN3 82 aa6.02□□□□□ -1.45
BRCA1-225ENST00000586385 COX8AP10176 69 aa6.01□□□□□ -1.45
BRCA1-225ENST00000586385 IFITM1P13164 125 aa6.01□□□□□ -1.45
BRCA1-225ENST00000586385 ANKRD39Q53RE8 183 aa6.01□□□□□ -1.45
BRCA1-225ENST00000586385 LINC00575Q6W349 94 aa6□□□□□ -1.45
BRCA1-225ENST00000586385 Q6ZVH6 145 aa6□□□□□ -1.45
BRCA1-225ENST00000586385 CLEC2BQ92478 149 aa6□□□□□ -1.45
BRCA1-225ENST00000586385 KRTAP9-3Q9BYQ3 159 aa6□□□□□ -1.45
BRCA1-225ENST00000586385 NHP2Q9NX24 153 aaKnown RBP6□□□□□ -1.45
BRCA1-225ENST00000586385 F8WEM9 126 aa5.99□□□□□ -1.45
BRCA1-225ENST00000586385 Q6JHZ5 121 aa5.99□□□□□ -1.45
BRCA1-225ENST00000586385 SCGB1D4Q6XE38 83 aa5.99□□□□□ -1.45
BRCA1-225ENST00000586385 ATOH7Q8N100 152 aa5.99□□□□□ -1.45
BRCA1-225ENST00000586385 Q96NJ1 140 aa5.99□□□□□ -1.45
BRCA1-225ENST00000586385 C20orf166-AS1Q96NR2 134 aa5.99□□□□□ -1.45
BRCA1-225ENST00000586385 A8MUU9 505 aa5.98□□□□□ -1.45
BRCA1-225ENST00000586385 M0R143 59 aa5.98□□□□□ -1.45
BRCA1-225ENST00000586385 OCIAD2Q56VL3 154 aa5.98□□□□□ -1.45
BRCA1-225ENST00000586385 Q6ZQY7 126 aa5.98□□□□□ -1.45
BRCA1-225ENST00000586385 HIGD1BQ9P298 99 aa5.98□□□□□ -1.45
BRCA1-225ENST00000586385 TRAV13-2A0A0B4J235 113 aa5.96□□□□□ -1.46
BRCA1-225ENST00000586385 TMEM238LA0A1B0GVL6 79 aa5.96□□□□□ -1.46
BRCA1-225ENST00000586385 A6NJY4 79 aa5.96□□□□□ -1.46
BRCA1-225ENST00000586385 KRTAP16-1A8MUX0 517 aa5.96□□□□□ -1.46
BRCA1-225ENST00000586385 C14orf144Q96I85 54 aa5.94□□□□□ -1.46
BRCA1-225ENST00000586385 hADV29S1A0JD25 119 aa5.93□□□□□ -1.46
BRCA1-225ENST00000586385 H3BUT2 72 aa5.93□□□□□ -1.46
BRCA1-225ENST00000586385 LST1O00453 97 aa5.93□□□□□ -1.46
BRCA1-225ENST00000586385 HSD52Q0P140 79 aa5.92□□□□□ -1.46
BRCA1-225ENST00000586385 MPLKIPQ8TAP9 179 aa5.92□□□□□ -1.46
BRCA1-225ENST00000586385 TRBV20-1A0A075B6N2 111 aa5.91□□□□□ -1.46
BRCA1-225ENST00000586385 HIST1H4GQ99525 98 aa5.91□□□□□ -1.46
BRCA1-225ENST00000586385 MACF1Q9UPN3 7388 aaKnown RBP5.91□□□□□ -1.46
BRCA1-225ENST00000586385 KRTAP10-10P60014 251 aa5.9□□□□□ -1.46
BRCA1-225ENST00000586385 VAMP3Q15836 100 aa5.9□□□□□ -1.46
BRCA1-225ENST00000586385 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.9□□□□□ -1.46
BRCA1-225ENST00000586385 HRES1P13985 223 aa5.89□□□□□ -1.47
BRCA1-225ENST00000586385 SYNE2Q8WXH0 6885 aaKnown RBP5.89□□□□□ -1.47
BRCA1-225ENST00000586385 PCP4L1A6NKN8 68 aa5.88□□□□□ -1.47
BRCA1-225ENST00000586385 DSCR10P59022 87 aa5.88□□□□□ -1.47
BRCA1-225ENST00000586385 PPDPFLQ8WWR9 84 aa5.87□□□□□ -1.47
BRCA1-225ENST00000586385 KRTAP19-6Q3LI70 58 aa5.86□□□□□ -1.47
BRCA1-225ENST00000586385 CEND1Q8N111 149 aa5.86□□□□□ -1.47
BRCA1-225ENST00000586385 COL5A1-AS1Q5SY13 56 aa5.85□□□□□ -1.47
BRCA1-225ENST00000586385 LYRM7Q5U5X0 104 aa5.85□□□□□ -1.47
BRCA1-225ENST00000586385 SNHG12Q9BXW3 62 aa5.85□□□□□ -1.47
BRCA1-225ENST00000586385 FAM236DA0A1B0GTK5 79 aa5.84□□□□□ -1.47
BRCA1-225ENST00000586385 FAM236CP0DP71 79 aa5.84□□□□□ -1.47
BRCA1-225ENST00000586385 SS18L2Q9UHA2 77 aa5.84□□□□□ -1.47
BRCA1-225ENST00000586385 A0A087WSZ3 146 aa5.83□□□□□ -1.48
BRCA1-225ENST00000586385 SNCGO76070 127 aa5.83□□□□□ -1.48
BRCA1-225ENST00000586385 C2orf91Q6ZV80 131 aa5.83□□□□□ -1.48
BRCA1-225ENST00000586385 NOTCH2NLQ7Z3S9 236 aa5.83□□□□□ -1.48
BRCA1-225ENST00000586385 TEN1Q86WV5 123 aa5.83□□□□□ -1.48
BRCA1-225ENST00000586385 RAB37Q96AX2 223 aa5.82□□□□□ -1.48
BRCA1-225ENST00000586385 A0A0B4J2C4 111 aa5.81□□□□□ -1.48
BRCA1-225ENST00000586385 COX6CP09669 75 aa5.81□□□□□ -1.48
BRCA1-225ENST00000586385 BVES-AS1Q5T3Y7 98 aa5.81□□□□□ -1.48
BRCA1-225ENST00000586385 KRTAP3-3Q9BYR6 98 aa5.81□□□□□ -1.48
BRCA1-225ENST00000586385 KRTAP3-2Q9BYR7 98 aa5.81□□□□□ -1.48
BRCA1-225ENST00000586385 FAM218AQ96MZ4 157 aa5.8□□□□□ -1.48
BRCA1-225ENST00000586385 A0A1W2PNM2 257 aa5.79□□□□□ -1.48
BRCA1-225ENST00000586385 NDUFV3P56181 108 aaKnown RBP5.79□□□□□ -1.48
BRCA1-225ENST00000586385 BATFQ16520 125 aa5.79□□□□□ -1.48
BRCA1-225ENST00000586385 PRO1854Q9UHT4 67 aa5.79□□□□□ -1.48
BRCA1-225ENST00000586385 RBM12B-AS1Q9P1G2 102 aa5.78□□□□□ -1.48
BRCA1-225ENST00000586385 GHRHP01286 108 aa5.77□□□□□ -1.49
BRCA1-225ENST00000586385 LINC00313P59037 77 aa5.77□□□□□ -1.49
BRCA1-225ENST00000586385 SIGMAR1Q99720 223 aa5.77□□□□□ -1.49
BRCA1-225ENST00000586385 KRTAP6-3Q3LI67 103 aa5.76□□□□□ -1.49
BRCA1-225ENST00000586385 H3BMG7 143 aa5.74□□□□□ -1.49
BRCA1-225ENST00000586385 FXYD2P54710 66 aa5.74□□□□□ -1.49
BRCA1-225ENST00000586385 H3BQ85 93 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 147.5 ms