RNA–Protein interactions for RNA: ENST00000585961.1

CLPTM1-204, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-204ENST00000585961 Q6ZVH6 145 aa10.48□□□□□ -0.73
CLPTM1-204ENST00000585961 ATP11AUNQ6ZP68 121 aa10.47□□□□□ -0.73
CLPTM1-204ENST00000585961 VAMP3Q15836 100 aa10.46□□□□□ -0.73
CLPTM1-204ENST00000585961 LINC00575Q6W349 94 aa10.46□□□□□ -0.73
CLPTM1-204ENST00000585961 TRBV7-7A0A0K0K1E9 115 aa10.44□□□□□ -0.74
CLPTM1-204ENST00000585961 IGFL1Q6UW32 110 aa10.44□□□□□ -0.74
CLPTM1-204ENST00000585961 Q6ZQY7 126 aa10.44□□□□□ -0.74
CLPTM1-204ENST00000585961 hADV29S1A0JD25 119 aa10.43□□□□□ -0.74
CLPTM1-204ENST00000585961 C20orf202A1L168 122 aa10.43□□□□□ -0.74
CLPTM1-204ENST00000585961 OCIAD2Q56VL3 154 aa10.42□□□□□ -0.74
CLPTM1-204ENST00000585961 Q6JHZ5 121 aa10.41□□□□□ -0.74
CLPTM1-204ENST00000585961 Q75L30 129 aa10.4□□□□□ -0.74
CLPTM1-204ENST00000585961 CLEC2BQ92478 149 aa10.39□□□□□ -0.75
CLPTM1-204ENST00000585961 Q96NJ1 140 aa10.39□□□□□ -0.75
CLPTM1-204ENST00000585961 COA6Q5JTJ3 125 aaKnown RBP10.38□□□□□ -0.75
CLPTM1-204ENST00000585961 LST1O00453 97 aa10.34□□□□□ -0.75
CLPTM1-204ENST00000585961 SNHG12Q9BXW3 62 aa10.34□□□□□ -0.75
CLPTM1-204ENST00000585961 H3BUT2 72 aa10.33□□□□□ -0.76
CLPTM1-204ENST00000585961 KRTAP9-8Q9BYQ0 159 aa10.31□□□□□ -0.76
CLPTM1-204ENST00000585961 C12orf57Q99622 126 aa10.3□□□□□ -0.76
CLPTM1-204ENST00000585961 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.29□□□□□ -0.76
CLPTM1-204ENST00000585961 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.29□□□□□ -0.76
CLPTM1-204ENST00000585961 KRTAP9-7A8MTY7 169 aa10.27□□□□□ -0.77
CLPTM1-204ENST00000585961 SNRPEP62304 92 aaKnown RBP10.27□□□□□ -0.77
CLPTM1-204ENST00000585961 USH2AO75445 5202 aa10.25□□□□□ -0.77
CLPTM1-204ENST00000585961 CFC1P0CG37 223 aa10.24□□□□□ -0.77
CLPTM1-204ENST00000585961 TRBV20-1A0A075B6N2 111 aa10.23□□□□□ -0.77
CLPTM1-204ENST00000585961 C20orf166-AS1Q96NR2 134 aa10.23□□□□□ -0.77
CLPTM1-204ENST00000585961 A8MUU9 505 aa10.21□□□□□ -0.77
CLPTM1-204ENST00000585961 HSBP1L1C9JCN9 74 aa10.21□□□□□ -0.77
CLPTM1-204ENST00000585961 BVES-AS1Q5T3Y7 98 aa10.21□□□□□ -0.77
CLPTM1-204ENST00000585961 PPDPFLQ8WWR9 84 aa10.21□□□□□ -0.77
CLPTM1-204ENST00000585961 SSPOA2VEC9 5147 aa10.21□□□□□ -0.78
CLPTM1-204ENST00000585961 DSCR10P59022 87 aa10.19□□□□□ -0.78
CLPTM1-204ENST00000585961 HIST1H4GQ99525 98 aa10.19□□□□□ -0.78
CLPTM1-204ENST00000585961 SCGB1D1O95968 90 aa10.18□□□□□ -0.78
CLPTM1-204ENST00000585961 A0A087WSZ3 146 aa10.16□□□□□ -0.78
CLPTM1-204ENST00000585961 TEN1Q86WV5 123 aa10.16□□□□□ -0.78
CLPTM1-204ENST00000585961 SS18L2Q9UHA2 77 aa10.16□□□□□ -0.78
CLPTM1-204ENST00000585961 HIST1H2BLQ99880 126 aa10.15□□□□□ -0.78
CLPTM1-204ENST00000585961 NDUFV3P56181 108 aaKnown RBP10.14□□□□□ -0.79
CLPTM1-204ENST00000585961 HIST3H2BBQ8N257 126 aa10.14□□□□□ -0.79
CLPTM1-204ENST00000585961 KRTAP16-1A8MUX0 517 aa10.13□□□□□ -0.79
CLPTM1-204ENST00000585961 S100A2P29034 98 aa10.13□□□□□ -0.79
CLPTM1-204ENST00000585961 FAM236DA0A1B0GTK5 79 aa10.12□□□□□ -0.79
CLPTM1-204ENST00000585961 MT2AP02795 61 aa10.12□□□□□ -0.79
CLPTM1-204ENST00000585961 FAM236CP0DP71 79 aa10.12□□□□□ -0.79
CLPTM1-204ENST00000585961 FAM218AQ96MZ4 157 aa10.11□□□□□ -0.79
CLPTM1-204ENST00000585961 H3BMG7 143 aa10.09□□□□□ -0.79
CLPTM1-204ENST00000585961 SNCGO76070 127 aa10.09□□□□□ -0.79
CLPTM1-204ENST00000585961 FCGBPQ9Y6R7 5405 aaPredicted RBP10.08□□□□□ -0.8
CLPTM1-204ENST00000585961 FABP2P12104 132 aa10.07□□□□□ -0.8
CLPTM1-204ENST00000585961 RAB37Q96AX2 223 aa10.07□□□□□ -0.8
CLPTM1-204ENST00000585961 SIGMAR1Q99720 223 aa10.07□□□□□ -0.8
CLPTM1-204ENST00000585961 LCE2BO14633 110 aa10.06□□□□□ -0.8
CLPTM1-204ENST00000585961 LINC00313P59037 77 aa10.06□□□□□ -0.8
CLPTM1-204ENST00000585961 H0YGX0 51 aa10.05□□□□□ -0.8
CLPTM1-204ENST00000585961 MT1FP04733 61 aa10.05□□□□□ -0.8
CLPTM1-204ENST00000585961 A0A1W2PNM2 257 aa10.04□□□□□ -0.8
CLPTM1-204ENST00000585961 COX8AP10176 69 aa10.04□□□□□ -0.8
CLPTM1-204ENST00000585961 KRTAP19-1Q8IUB9 90 aa10.04□□□□□ -0.8
CLPTM1-204ENST00000585961 KRTAP10-10P60014 251 aa10.03□□□□□ -0.8
CLPTM1-204ENST00000585961 NOTCH2NLQ7Z3S9 236 aa10.03□□□□□ -0.8
CLPTM1-204ENST00000585961 IGKV4-1P06312 121 aa10.02□□□□□ -0.81
CLPTM1-204ENST00000585961 DEFB116Q30KQ4 102 aa10.01□□□□□ -0.81
CLPTM1-204ENST00000585961 C14orf144Q96I85 54 aa10.01□□□□□ -0.81
CLPTM1-204ENST00000585961 KRTAP9-3Q9BYQ3 159 aa10□□□□□ -0.81
CLPTM1-204ENST00000585961 A0A1B0GV72 72 aa9.99□□□□□ -0.81
CLPTM1-204ENST00000585961 RBM12B-AS1Q9P1G2 102 aa9.99□□□□□ -0.81
CLPTM1-204ENST00000585961 HRES1P13985 223 aa9.98□□□□□ -0.81
CLPTM1-204ENST00000585961 DLEU1O43261 78 aa9.96□□□□□ -0.82
CLPTM1-204ENST00000585961 S100A6P06703 90 aa9.96□□□□□ -0.82
CLPTM1-204ENST00000585961 A0A0B4J2C4 111 aa9.95□□□□□ -0.82
CLPTM1-204ENST00000585961 MPLKIPQ8TAP9 179 aa9.95□□□□□ -0.82
CLPTM1-204ENST00000585961 ANKRD29Q8N6D5 301 aa9.94□□□□□ -0.82
CLPTM1-204ENST00000585961 GHRHP01286 108 aa9.92□□□□□ -0.82
CLPTM1-204ENST00000585961 IGHV6-1A0A0B4J1U7 121 aa9.91□□□□□ -0.82
CLPTM1-204ENST00000585961 A0A1B0GX51 115 aa9.9□□□□□ -0.82
CLPTM1-204ENST00000585961 PRO1854Q9UHT4 67 aa9.9□□□□□ -0.82
CLPTM1-204ENST00000585961 HIGD1BQ9P298 99 aa9.89□□□□□ -0.83
CLPTM1-204ENST00000585961 PAM16Q9Y3D7 125 aa9.89□□□□□ -0.83
CLPTM1-204ENST00000585961 TRBV7-4A0A0J9YYF1 115 aa9.88□□□□□ -0.83
CLPTM1-204ENST00000585961 TRIAP1O43715 76 aa9.87□□□□□ -0.83
CLPTM1-204ENST00000585961 SPATA45Q537H7 98 aa9.87□□□□□ -0.83
CLPTM1-204ENST00000585961 C2orf91Q6ZV80 131 aa9.87□□□□□ -0.83
CLPTM1-204ENST00000585961 CEND1Q8N111 149 aa9.87□□□□□ -0.83
CLPTM1-204ENST00000585961 LINC00472Q9H8W2 130 aa9.87□□□□□ -0.83
CLPTM1-204ENST00000585961 MACF1Q9UPN3 7388 aaKnown RBP9.84□□□□□ -0.83
CLPTM1-204ENST00000585961 CCKP06307 115 aa9.82□□□□□ -0.84
CLPTM1-204ENST00000585961 FXYD2P54710 66 aa9.82□□□□□ -0.84
CLPTM1-204ENST00000585961 ORMDL1Q9P0S3 153 aa9.82□□□□□ -0.84
CLPTM1-204ENST00000585961 SYNE2Q8WXH0 6885 aaKnown RBP9.81□□□□□ -0.84
CLPTM1-204ENST00000585961 TRACP01848 142 aa9.81□□□□□ -0.84
CLPTM1-204ENST00000585961 DNAL4O96015 105 aa9.8□□□□□ -0.84
CLPTM1-204ENST00000585961 TMEM238LA0A1B0GVL6 79 aa9.79□□□□□ -0.84
CLPTM1-204ENST00000585961 A6NJY4 79 aa9.79□□□□□ -0.84
CLPTM1-204ENST00000585961 PSMB2P49721 201 aa9.78□□□□□ -0.84
CLPTM1-204ENST00000585961 MTURNQ8N3F0 131 aa9.78□□□□□ -0.84
CLPTM1-204ENST00000585961 VPS25Q9BRG1 176 aa9.78□□□□□ -0.84
CLPTM1-204ENST00000585961 TMEM256-PLSCR3K7ERE1 68 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms