RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 HIST1H2BCP62807 126 aa7.5□□□□□ -1.21
SDF2-202ENST00000585428 HIST2H2BEQ16778 126 aa7.5□□□□□ -1.21
SDF2-202ENST00000585428 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.5□□□□□ -1.21
SDF2-202ENST00000585428 Q6ZVH6 145 aa7.5□□□□□ -1.21
SDF2-202ENST00000585428 HIST1H2BHQ93079 126 aa7.5□□□□□ -1.21
SDF2-202ENST00000585428 HIST1H2BNQ99877 126 aa7.5□□□□□ -1.21
SDF2-202ENST00000585428 HIST1H2BMQ99879 126 aa7.5□□□□□ -1.21
SDF2-202ENST00000585428 NHP2Q9NX24 153 aaKnown RBP7.5□□□□□ -1.21
SDF2-202ENST00000585428 C3orf79P0CE67 100 aa7.49□□□□□ -1.21
SDF2-202ENST00000585428 SCGB1D4Q6XE38 83 aa7.49□□□□□ -1.21
SDF2-202ENST00000585428 ATP11AUNQ6ZP68 121 aa7.49□□□□□ -1.21
SDF2-202ENST00000585428 Q75L30 129 aa7.49□□□□□ -1.21
SDF2-202ENST00000585428 SMIM11BQ8TCY0 68 aa7.49□□□□□ -1.21
SDF2-202ENST00000585428 KRTAP9-7A8MTY7 169 aa7.48□□□□□ -1.21
SDF2-202ENST00000585428 Q6Q795 121 aa7.48□□□□□ -1.21
SDF2-202ENST00000585428 KRTAP9-8Q9BYQ0 159 aa7.48□□□□□ -1.21
SDF2-202ENST00000585428 TRAV13-2A0A0B4J235 113 aa7.47□□□□□ -1.21
SDF2-202ENST00000585428 PCP2Q8IVA1 136 aa7.47□□□□□ -1.21
SDF2-202ENST00000585428 KRTAP9-9Q9BYP9 154 aa7.47□□□□□ -1.21
SDF2-202ENST00000585428 KRTAP9-4Q9BYQ2 154 aa7.47□□□□□ -1.21
SDF2-202ENST00000585428 TRBV7-7A0A0K0K1E9 115 aa7.46□□□□□ -1.22
SDF2-202ENST00000585428 KRTAP19-1Q8IUB9 90 aa7.46□□□□□ -1.22
SDF2-202ENST00000585428 OBSCN-AS1Q96MR7 158 aa7.46□□□□□ -1.22
SDF2-202ENST00000585428 Q6JHZ5 121 aa7.45□□□□□ -1.22
SDF2-202ENST00000585428 LINC00575Q6W349 94 aa7.45□□□□□ -1.22
SDF2-202ENST00000585428 F8WEM9 126 aa7.44□□□□□ -1.22
SDF2-202ENST00000585428 IGFL1Q6UW32 110 aa7.44□□□□□ -1.22
SDF2-202ENST00000585428 SLC7A5P1Q8MH63 180 aa7.44□□□□□ -1.22
SDF2-202ENST00000585428 OCIAD2Q56VL3 154 aa7.43□□□□□ -1.22
SDF2-202ENST00000585428 USH2AO75445 5202 aa7.42□□□□□ -1.22
SDF2-202ENST00000585428 CFC1P0CG37 223 aa7.42□□□□□ -1.22
SDF2-202ENST00000585428 VAMP3Q15836 100 aa7.42□□□□□ -1.22
SDF2-202ENST00000585428 CLEC2BQ92478 149 aa7.42□□□□□ -1.22
SDF2-202ENST00000585428 hADV29S1A0JD25 119 aa7.41□□□□□ -1.22
SDF2-202ENST00000585428 KRTDAPP60985 99 aa7.41□□□□□ -1.22
SDF2-202ENST00000585428 SSPOA2VEC9 5147 aa7.41□□□□□ -1.22
SDF2-202ENST00000585428 COA6Q5JTJ3 125 aaKnown RBP7.4□□□□□ -1.22
SDF2-202ENST00000585428 Q6ZQY7 126 aa7.4□□□□□ -1.22
SDF2-202ENST00000585428 C20orf202A1L168 122 aa7.39□□□□□ -1.23
SDF2-202ENST00000585428 ATOH7Q8N100 152 aa7.38□□□□□ -1.23
SDF2-202ENST00000585428 Q96NJ1 140 aa7.38□□□□□ -1.23
SDF2-202ENST00000585428 C20orf166-AS1Q96NR2 134 aa7.37□□□□□ -1.23
SDF2-202ENST00000585428 LST1O00453 97 aa7.36□□□□□ -1.23
SDF2-202ENST00000585428 KRTAP4-8A0A0G2JLE6 195 aa7.35□□□□□ -1.23
SDF2-202ENST00000585428 A8MUU9 505 aa7.34□□□□□ -1.23
SDF2-202ENST00000585428 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.34□□□□□ -1.23
SDF2-202ENST00000585428 PPDPFLQ8WWR9 84 aa7.34□□□□□ -1.23
SDF2-202ENST00000585428 SNRPEP62304 92 aaKnown RBP7.32□□□□□ -1.24
SDF2-202ENST00000585428 SNHG12Q9BXW3 62 aa7.32□□□□□ -1.24
SDF2-202ENST00000585428 FCGBPQ9Y6R7 5405 aaPredicted RBP7.32□□□□□ -1.24
SDF2-202ENST00000585428 TRBV20-1A0A075B6N2 111 aa7.31□□□□□ -1.24
SDF2-202ENST00000585428 H3BUT2 72 aa7.3□□□□□ -1.24
SDF2-202ENST00000585428 MT2AP02795 61 aa7.3□□□□□ -1.24
SDF2-202ENST00000585428 SCGB1D1O95968 90 aa7.29□□□□□ -1.24
SDF2-202ENST00000585428 KRTAP16-1A8MUX0 517 aa7.27□□□□□ -1.25
SDF2-202ENST00000585428 BVES-AS1Q5T3Y7 98 aa7.27□□□□□ -1.25
SDF2-202ENST00000585428 TEN1Q86WV5 123 aa7.26□□□□□ -1.25
SDF2-202ENST00000585428 KRTAP9-3Q9BYQ3 159 aa7.26□□□□□ -1.25
SDF2-202ENST00000585428 SS18L2Q9UHA2 77 aa7.26□□□□□ -1.25
SDF2-202ENST00000585428 MT1FP04733 61 aa7.24□□□□□ -1.25
SDF2-202ENST00000585428 MPLKIPQ8TAP9 179 aa7.22□□□□□ -1.25
SDF2-202ENST00000585428 NDUFV3P56181 108 aaKnown RBP7.21□□□□□ -1.26
SDF2-202ENST00000585428 DSCR10P59022 87 aa7.21□□□□□ -1.26
SDF2-202ENST00000585428 C12orf57Q99622 126 aa7.21□□□□□ -1.26
SDF2-202ENST00000585428 A0A087WSZ3 146 aa7.2□□□□□ -1.26
SDF2-202ENST00000585428 KRTAP10-10P60014 251 aa7.19□□□□□ -1.26
SDF2-202ENST00000585428 HSBP1L1C9JCN9 74 aa7.18□□□□□ -1.26
SDF2-202ENST00000585428 HRES1P13985 223 aa7.17□□□□□ -1.26
SDF2-202ENST00000585428 LINC00313P59037 77 aa7.17□□□□□ -1.26
SDF2-202ENST00000585428 HIST1H4GQ99525 98 aa7.17□□□□□ -1.26
SDF2-202ENST00000585428 KRTAP23-1A1A580 65 aa7.16□□□□□ -1.26
SDF2-202ENST00000585428 H0YGX0 51 aa7.16□□□□□ -1.26
SDF2-202ENST00000585428 FAM218AQ96MZ4 157 aa7.16□□□□□ -1.26
SDF2-202ENST00000585428 HIST1H2BLQ99880 126 aa7.16□□□□□ -1.26
SDF2-202ENST00000585428 FAM236DA0A1B0GTK5 79 aa7.15□□□□□ -1.26
SDF2-202ENST00000585428 H3BMG7 143 aa7.15□□□□□ -1.26
SDF2-202ENST00000585428 SNCGO76070 127 aa7.15□□□□□ -1.26
SDF2-202ENST00000585428 FAM236CP0DP71 79 aa7.15□□□□□ -1.26
SDF2-202ENST00000585428 NOTCH2NLQ7Z3S9 236 aa7.15□□□□□ -1.26
SDF2-202ENST00000585428 HIST3H2BBQ8N257 126 aa7.15□□□□□ -1.26
SDF2-202ENST00000585428 RBM12B-AS1Q9P1G2 102 aa7.15□□□□□ -1.26
SDF2-202ENST00000585428 A0A1W2PNM2 257 aa7.14□□□□□ -1.27
SDF2-202ENST00000585428 LCE1DQ5T752 114 aa7.11□□□□□ -1.27
SDF2-202ENST00000585428 IGKV4-1P06312 121 aa7.1□□□□□ -1.27
SDF2-202ENST00000585428 COX8AP10176 69 aa7.1□□□□□ -1.27
SDF2-202ENST00000585428 SIGMAR1Q99720 223 aa7.1□□□□□ -1.27
SDF2-202ENST00000585428 KRTAP4-7Q9BYR0 210 aa7.1□□□□□ -1.27
SDF2-202ENST00000585428 MACF1Q9UPN3 7388 aaKnown RBP7.09□□□□□ -1.27
SDF2-202ENST00000585428 A0A1B0GX51 115 aa7.09□□□□□ -1.27
SDF2-202ENST00000585428 DLEU1O43261 78 aa7.09□□□□□ -1.27
SDF2-202ENST00000585428 FABP2P12104 132 aa7.09□□□□□ -1.27
SDF2-202ENST00000585428 S100A2P29034 98 aa7.09□□□□□ -1.27
SDF2-202ENST00000585428 RAB37Q96AX2 223 aa7.09□□□□□ -1.27
SDF2-202ENST00000585428 TRBV7-4A0A0J9YYF1 115 aa7.08□□□□□ -1.28
SDF2-202ENST00000585428 A0A0B4J2C4 111 aa7.07□□□□□ -1.28
SDF2-202ENST00000585428 KRTAP19-6Q3LI70 58 aa7.07□□□□□ -1.28
SDF2-202ENST00000585428 LINC00472Q9H8W2 130 aa7.07□□□□□ -1.28
SDF2-202ENST00000585428 SYNE2Q8WXH0 6885 aaKnown RBP7.06□□□□□ -1.28
SDF2-202ENST00000585428 KRTAP3-1Q9BYR8 98 aa7.05□□□□□ -1.28
SDF2-202ENST00000585428 DEFB116Q30KQ4 102 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms