RNA–Protein interactions for RNA: ENST00000584669.5

TOP3A-218, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-218ENST00000584669 LIMD2Q9BT23 127 aa11.57□□□□□ -0.56
TOP3A-218ENST00000584669 CD164Q04900 197 aa11.56□□□□□ -0.56
TOP3A-218ENST00000584669 LCE2AQ5TA79 106 aaPredicted RBP11.56□□□□□ -0.56
TOP3A-218ENST00000584669 FXYD2P54710 66 aa11.55□□□□□ -0.56
TOP3A-218ENST00000584669 FAT4Q6V0I7 4981 aa11.54□□□□□ -0.56
TOP3A-218ENST00000584669 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.53□□□□□ -0.56
TOP3A-218ENST00000584669 KRTAP9-2Q9BYQ4 174 aa11.52□□□□□ -0.57
TOP3A-218ENST00000584669 TMEM238LA0A1B0GVL6 79 aa11.51□□□□□ -0.57
TOP3A-218ENST00000584669 A6NJY4 79 aa11.51□□□□□ -0.57
TOP3A-218ENST00000584669 F8WEM9 126 aa11.51□□□□□ -0.57
TOP3A-218ENST00000584669 PRO1854Q9UHT4 67 aa11.51□□□□□ -0.57
TOP3A-218ENST00000584669 FAM218AQ96MZ4 157 aa11.49□□□□□ -0.57
TOP3A-218ENST00000584669 MUC17Q685J3 4493 aa11.49□□□□□ -0.57
TOP3A-218ENST00000584669 HSD52Q0P140 79 aa11.47□□□□□ -0.57
TOP3A-218ENST00000584669 H0YGX0 51 aa11.46□□□□□ -0.57
TOP3A-218ENST00000584669 Q5XG85 94 aa11.45□□□□□ -0.58
TOP3A-218ENST00000584669 IGLV8-61A0A075B6I0 122 aa11.44□□□□□ -0.58
TOP3A-218ENST00000584669 ASB16-AS1Q495Z4 193 aa11.44□□□□□ -0.58
TOP3A-218ENST00000584669 OCIAD2Q56VL3 154 aa11.44□□□□□ -0.58
TOP3A-218ENST00000584669 PPDPFLQ8WWR9 84 aa11.44□□□□□ -0.58
TOP3A-218ENST00000584669 UQCR10Q9UDW1 63 aa11.44□□□□□ -0.58
TOP3A-218ENST00000584669 IGFL1Q6UW32 110 aa11.43□□□□□ -0.58
TOP3A-218ENST00000584669 SNHG12Q9BXW3 62 aa11.43□□□□□ -0.58
TOP3A-218ENST00000584669 K7ERJ3 54 aa11.42□□□□□ -0.58
TOP3A-218ENST00000584669 Q6JHZ5 121 aa11.42□□□□□ -0.58
TOP3A-218ENST00000584669 TRIAP1O43715 76 aa11.41□□□□□ -0.58
TOP3A-218ENST00000584669 SEC61BP60468 96 aaKnown RBP11.41□□□□□ -0.58
TOP3A-218ENST00000584669 XP32Q5T750 250 aa11.41□□□□□ -0.58
TOP3A-218ENST00000584669 C1orf195Q5TG92 126 aa11.41□□□□□ -0.58
TOP3A-218ENST00000584669 CLEC2BQ92478 149 aa11.41□□□□□ -0.58
TOP3A-218ENST00000584669 SNCGO76070 127 aa11.4□□□□□ -0.58
TOP3A-218ENST00000584669 H3BUT2 72 aa11.39□□□□□ -0.59
TOP3A-218ENST00000584669 C9orf92A6NGG3 77 aa11.38□□□□□ -0.59
TOP3A-218ENST00000584669 KRTAP4-1Q9BYQ7 146 aa11.36□□□□□ -0.59
TOP3A-218ENST00000584669 TRBV7-7A0A0K0K1E9 115 aa11.35□□□□□ -0.59
TOP3A-218ENST00000584669 A0A1B0GX51 115 aa11.35□□□□□ -0.59
TOP3A-218ENST00000584669 TCL1BO95988 128 aa11.35□□□□□ -0.59
TOP3A-218ENST00000584669 PSMB2P49721 201 aa11.33□□□□□ -0.6
TOP3A-218ENST00000584669 NDUFV3P56181 108 aaKnown RBP11.33□□□□□ -0.6
TOP3A-218ENST00000584669 FABP2P12104 132 aa11.29□□□□□ -0.6
TOP3A-218ENST00000584669 H3BMG7 143 aa11.25□□□□□ -0.61
TOP3A-218ENST00000584669 GHRHP01286 108 aa11.25□□□□□ -0.61
TOP3A-218ENST00000584669 COX6CP09669 75 aa11.25□□□□□ -0.61
TOP3A-218ENST00000584669 DNAL4O96015 105 aa11.24□□□□□ -0.61
TOP3A-218ENST00000584669 Q6Q795 121 aa11.23□□□□□ -0.61
TOP3A-218ENST00000584669 ORMDL1Q9P0S3 153 aa11.23□□□□□ -0.61
TOP3A-218ENST00000584669 SMIM6P0DI80 62 aa11.22□□□□□ -0.61
TOP3A-218ENST00000584669 KRTAP9-6A0A140TA67 174 aa11.21□□□□□ -0.61
TOP3A-218ENST00000584669 TEN1Q86WV5 123 aa11.21□□□□□ -0.61
TOP3A-218ENST00000584669 PCOTHQ58A44 107 aa11.2□□□□□ -0.62
TOP3A-218ENST00000584669 A0A1B0GV72 72 aa11.19□□□□□ -0.62
TOP3A-218ENST00000584669 LST1O00453 97 aa11.18□□□□□ -0.62
TOP3A-218ENST00000584669 SCGB1C2P0DMR2 95 aa11.17□□□□□ -0.62
TOP3A-218ENST00000584669 A0A1W2PNM2 257 aa11.16□□□□□ -0.62
TOP3A-218ENST00000584669 A0A087WSZ3 146 aa11.15□□□□□ -0.62
TOP3A-218ENST00000584669 H3BQ85 93 aa11.15□□□□□ -0.62
TOP3A-218ENST00000584669 TMEM256-PLSCR3K7ERE1 68 aa11.15□□□□□ -0.62
TOP3A-218ENST00000584669 SS18L2Q9UHA2 77 aa11.15□□□□□ -0.62
TOP3A-218ENST00000584669 M0R143 59 aa11.14□□□□□ -0.63
TOP3A-218ENST00000584669 TRACP01848 142 aa11.14□□□□□ -0.63
TOP3A-218ENST00000584669 RPL37P61927 97 aaKnown RBP11.12□□□□□ -0.63
TOP3A-218ENST00000584669 ANKRD29Q8N6D5 301 aa11.12□□□□□ -0.63
TOP3A-218ENST00000584669 LOC105371267A0A1B0GV96 52 aa11.11□□□□□ -0.63
TOP3A-218ENST00000584669 NAA38Q9BRA0 125 aaKnown RBP11.11□□□□□ -0.63
TOP3A-218ENST00000584669 UBE2V1Q13404 147 aa11.09□□□□□ -0.63
TOP3A-218ENST00000584669 Q96NJ1 140 aa11.09□□□□□ -0.63
TOP3A-218ENST00000584669 OBSCN-AS1Q96MR7 158 aa11.08□□□□□ -0.64
TOP3A-218ENST00000584669 LCE2CQ5TA81 110 aa11.06□□□□□ -0.64
TOP3A-218ENST00000584669 TRBV7-4A0A0J9YYF1 115 aa11.05□□□□□ -0.64
TOP3A-218ENST00000584669 TSTD3H0UI37 97 aa11.05□□□□□ -0.64
TOP3A-218ENST00000584669 CCKP06307 115 aa11.03□□□□□ -0.64
TOP3A-218ENST00000584669 BAALC-AS2P0C853 105 aa11.03□□□□□ -0.64
TOP3A-218ENST00000584669 KRTAP19-2Q3LHN2 52 aa11.01□□□□□ -0.65
TOP3A-218ENST00000584669 LCE2DQ5TA82 110 aaPredicted RBP11.01□□□□□ -0.65
TOP3A-218ENST00000584669 RBM3P98179 157 aaKnown RBP10.99□□□□□ -0.65
TOP3A-218ENST00000584669 BATFQ16520 125 aa10.99□□□□□ -0.65
TOP3A-218ENST00000584669 MT1HP80294 61 aa10.98□□□□□ -0.65
TOP3A-218ENST00000584669 ATXN8Q156A1 80 aa10.98□□□□□ -0.65
TOP3A-218ENST00000584669 SIGMAR1Q99720 223 aa10.98□□□□□ -0.65
TOP3A-218ENST00000584669 Q75L30 129 aa10.97□□□□□ -0.65
TOP3A-218ENST00000584669 VPS25Q9BRG1 176 aa10.97□□□□□ -0.65
TOP3A-218ENST00000584669 IGKV4-1P06312 121 aa10.95□□□□□ -0.66
TOP3A-218ENST00000584669 DSCR8Q96T75 97 aa10.95□□□□□ -0.66
TOP3A-218ENST00000584669 DEFB116Q30KQ4 102 aa10.94□□□□□ -0.66
TOP3A-218ENST00000584669 DSCR10P59022 87 aa10.93□□□□□ -0.66
TOP3A-218ENST00000584669 LINC00472Q9H8W2 130 aa10.92□□□□□ -0.66
TOP3A-218ENST00000584669 C9JAW5 83 aa10.9□□□□□ -0.66
TOP3A-218ENST00000584669 ATP11AUNQ6ZP68 121 aa10.9□□□□□ -0.66
TOP3A-218ENST00000584669 C20orf166-AS1Q96NR2 134 aa10.9□□□□□ -0.66
TOP3A-218ENST00000584669 LYRM7Q5U5X0 104 aa10.88□□□□□ -0.67
TOP3A-218ENST00000584669 COX6B2Q6YFQ2 88 aa10.88□□□□□ -0.67
TOP3A-218ENST00000584669 A8MUU9 505 aa10.87□□□□□ -0.67
TOP3A-218ENST00000584669 TRBV20-1A0A075B6N2 111 aa10.85□□□□□ -0.67
TOP3A-218ENST00000584669 M0R2T5 61 aa10.85□□□□□ -0.67
TOP3A-218ENST00000584669 LINC00313P59037 77 aa10.85□□□□□ -0.67
TOP3A-218ENST00000584669 NOTCH2NLQ7Z3S9 236 aa10.85□□□□□ -0.67
TOP3A-218ENST00000584669 CRCT1Q9UGL9 99 aa10.85□□□□□ -0.67
TOP3A-218ENST00000584669 C9orf118A6NHY6 69 aa10.84□□□□□ -0.67
TOP3A-218ENST00000584669 TAX1BP3O14907 124 aa10.84□□□□□ -0.67
TOP3A-218ENST00000584669 JMJD7-PLA2G4BH0Y9G9 81 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms